Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10h08
(707 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p pro... 295 4e-80
AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin fu... 295 4e-80
AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin fu... 295 4e-80
AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA... 295 4e-80
U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein. 29 4.7
AY051471-1|AAK92895.1| 618|Drosophila melanogaster GH13824p pro... 29 4.7
AF246305-1|AAF99606.1| 618|Drosophila melanogaster ORC2 protein. 29 4.7
AE014297-1778|AAF55006.1| 618|Drosophila melanogaster CG3041-PA... 29 4.7
BT029922-1|ABM92796.1| 348|Drosophila melanogaster IP05277p pro... 29 6.2
AE014296-889|AAN11613.1| 328|Drosophila melanogaster CG32234-PA... 29 6.2
>AY060735-1|AAL28283.1| 316|Drosophila melanogaster GH18603p
protein.
Length = 316
Score = 295 bits (724), Expect = 4e-80
Identities = 150/240 (62%), Positives = 167/240 (69%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L+ LTRLN+EYPM+FKLTN K R +H GVLEFVADEG+ YLPHWMM NL+L EG ++ I
Sbjct: 50 LDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNI 109
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ESVSLPVATFSKFQP S DFLDITNPKAVLEN LRNF+CLT GDVIAIKYN KVYELCVL
Sbjct: 110 ESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVL 169
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDG-----AVEGMDEDPAAMMPESSG 526
ETKPGNAV IIECDMNVEF PVGYK+ S G G + A
Sbjct: 170 ETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEV 229
Query: 527 FRAFSGEGNRLDGKKKKLISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRPAKD 706
F G G RLDGKKKK +S+ T ++ RG+PDYDF G +RF RN RP D
Sbjct: 230 VETFKGSGVRLDGKKKK-----ESQLETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISD 284
>AF228283-1|AAK00731.1| 316|Drosophila melanogaster ubiquitin
fusion-degradation 1-like protein protein.
Length = 316
Score = 295 bits (724), Expect = 4e-80
Identities = 150/240 (62%), Positives = 167/240 (69%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L+ LTRLN+EYPM+FKLTN K R +H GVLEFVADEG+ YLPHWMM NL+L EG ++ I
Sbjct: 50 LDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNI 109
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ESVSLPVATFSKFQP S DFLDITNPKAVLEN LRNF+CLT GDVIAIKYN KVYELCVL
Sbjct: 110 ESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVL 169
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDG-----AVEGMDEDPAAMMPESSG 526
ETKPGNAV IIECDMNVEF PVGYK+ S G G + A
Sbjct: 170 ETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEV 229
Query: 527 FRAFSGEGNRLDGKKKKLISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRPAKD 706
F G G RLDGKKKK +S+ T ++ RG+PDYDF G +RF RN RP D
Sbjct: 230 VETFKGSGVRLDGKKKK-----ESQLETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISD 284
>AF228282-1|AAK00730.1| 316|Drosophila melanogaster ubiquitin
fusion-degradation 1-like protein protein.
Length = 316
Score = 295 bits (724), Expect = 4e-80
Identities = 150/240 (62%), Positives = 167/240 (69%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L+ LTRLN+EYPM+FKLTN K R +H GVLEFVADEG+ YLPHWMM NL+L EG ++ I
Sbjct: 50 LDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNI 109
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ESVSLPVATFSKFQP S DFLDITNPKAVLEN LRNF+CLT GDVIAIKYN KVYELCVL
Sbjct: 110 ESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVL 169
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDG-----AVEGMDEDPAAMMPESSG 526
ETKPGNAV IIECDMNVEF PVGYK+ S G G + A
Sbjct: 170 ETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEV 229
Query: 527 FRAFSGEGNRLDGKKKKLISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRPAKD 706
F G G RLDGKKKK +S+ T ++ RG+PDYDF G +RF RN RP D
Sbjct: 230 VETFKGSGVRLDGKKKK-----ESQLETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISD 284
>AE014296-1911|AAF50090.1| 316|Drosophila melanogaster CG6233-PA
protein.
Length = 316
Score = 295 bits (724), Expect = 4e-80
Identities = 150/240 (62%), Positives = 167/240 (69%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L+ LTRLN+EYPM+FKLTN K R +H GVLEFVADEG+ YLPHWMM NL+L EG ++ I
Sbjct: 50 LDTLTRLNVEYPMLFKLTNVKKSRSSHAGVLEFVADEGKCYLPHWMMENLLLGEGDILNI 109
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ESVSLPVATFSKFQP S DFLDITNPKAVLEN LRNF+CLT GDVIAIKYN KVYELCVL
Sbjct: 110 ESVSLPVATFSKFQPHSTDFLDITNPKAVLENALRNFACLTRGDVIAIKYNKKVYELCVL 169
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDG-----AVEGMDEDPAAMMPESSG 526
ETKPGNAV IIECDMNVEF PVGYK+ S G G + A
Sbjct: 170 ETKPGNAVSIIECDMNVEFEAPVGYKDHSETQASGSGQQGAAGTVGGEIAGATNAILEEV 229
Query: 527 FRAFSGEGNRLDGKKKKLISESDSEPGTSQPRQSYVRGIPDYDFVIGTLRFIRNSRPAKD 706
F G G RLDGKKKK +S+ T ++ RG+PDYDF G +RF RN RP D
Sbjct: 230 VETFKGSGVRLDGKKKK-----ESQLETPVVKKVLARGVPDYDFQFGLIRFDRNIRPISD 284
>U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein.
Length = 618
Score = 29.5 bits (63), Expect = 4.7
Identities = 32/132 (24%), Positives = 54/132 (40%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L++L + +F L ++ H G + + +E R Y P WM +L EG I +
Sbjct: 299 LDRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWM---CILNEGFNILL 355
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
+ SK Q L ++ + + VL F LT D++ S + + +
Sbjct: 356 YGLG------SKHQLLQSFHREVLHKQTVLV-VNGFFPSLTIKDMLD-SITSDILDAGIS 407
Query: 362 ETKPGNAVIIIE 397
P AV +IE
Sbjct: 408 PANPHEAVDMIE 419
>AY051471-1|AAK92895.1| 618|Drosophila melanogaster GH13824p
protein.
Length = 618
Score = 29.5 bits (63), Expect = 4.7
Identities = 32/132 (24%), Positives = 54/132 (40%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L++L + +F L ++ H G + + +E R Y P WM +L EG I +
Sbjct: 299 LDRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWM---CILNEGFNILL 355
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
+ SK Q L ++ + + VL F LT D++ S + + +
Sbjct: 356 YGLG------SKHQLLQSFHREVLHKQTVLV-VNGFFPSLTIKDMLD-SITSDILDAGIS 407
Query: 362 ETKPGNAVIIIE 397
P AV +IE
Sbjct: 408 PANPHEAVDMIE 419
>AF246305-1|AAF99606.1| 618|Drosophila melanogaster ORC2 protein.
Length = 618
Score = 29.5 bits (63), Expect = 4.7
Identities = 32/132 (24%), Positives = 54/132 (40%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L++L + +F L ++ H G + + +E R Y P WM +L EG I +
Sbjct: 299 LDRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWM---CILNEGFNILL 355
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
+ SK Q L ++ + + VL F LT D++ S + + +
Sbjct: 356 YGLG------SKHQLLQSFHREVLHKQTVLV-VNGFFPSLTIKDMLD-SITSDILDAGIS 407
Query: 362 ETKPGNAVIIIE 397
P AV +IE
Sbjct: 408 PANPHEAVDMIE 419
>AE014297-1778|AAF55006.1| 618|Drosophila melanogaster CG3041-PA
protein.
Length = 618
Score = 29.5 bits (63), Expect = 4.7
Identities = 32/132 (24%), Positives = 54/132 (40%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L++L + +F L ++ H G + + +E R Y P WM +L EG I +
Sbjct: 299 LDRLKNPRLAADRVFSLLSEIKTSAEHEGSINAIMEEYRSYFPKWM---CILNEGFNILL 355
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
+ SK Q L ++ + + VL F LT D++ S + + +
Sbjct: 356 YGLG------SKHQLLQSFHREVLHKQTVLV-VNGFFPSLTIKDMLD-SITSDILDAGIS 407
Query: 362 ETKPGNAVIIIE 397
P AV +IE
Sbjct: 408 PANPHEAVDMIE 419
>BT029922-1|ABM92796.1| 348|Drosophila melanogaster IP05277p
protein.
Length = 348
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 VIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRA------FSG 544
VII+ C + + + YK++ + R D + E A M ES G +A +G
Sbjct: 128 VIIVICCLLEVYRSHLAYKKR--IERETDEDIIWSKEQ-ATKMHESPGVKAGLLGGVTAG 184
Query: 545 EGNRLDGKKKKLISESDSEPGTSQP 619
GN L K + + D +PG P
Sbjct: 185 SGNGLPPYTYKALPQEDKKPGNGAP 209
>AE014296-889|AAN11613.1| 328|Drosophila melanogaster CG32234-PA
protein.
Length = 328
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = +2
Query: 383 VIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRA------FSG 544
VII+ C + + + YK++ + R D + E A M ES G +A +G
Sbjct: 93 VIIVICCLLEVYRSHLAYKKR--IERETDEDIIWSKEQ-ATKMHESPGVKAGLLGGVTAG 149
Query: 545 EGNRLDGKKKKLISESDSEPGTSQP 619
GN L K + + D +PG P
Sbjct: 150 SGNGLPPYTYKALPQEDKKPGNGAP 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,613,578
Number of Sequences: 53049
Number of extensions: 657766
Number of successful extensions: 1801
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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