Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10h08
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical pr... 176 1e-44
Z81493-10|CAB04044.2| 508|Caenorhabditis elegans Hypothetical p... 29 4.3
AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical... 29 4.3
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 29 4.3
U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical p... 27 9.9
AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z69635-4|CAB54216.1| 336|Caenorhabditis elegans Hypothetical
protein F19B6.2b protein.
Length = 336
Score = 176 bits (428), Expect = 1e-44
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 13/213 (6%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L L + NI PM+FKLTN +R+THCGVLEF A EG+ LP WMM L L++G I+I
Sbjct: 51 LNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRI 110
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ES +LP ATF+K +P+S +FL+ITNPKAVLE LR ++CLT D I Y + E V+
Sbjct: 111 ESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVV 170
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRA-- 535
+ KP N+V IIECD+N++F PP GY EQ R AV P A +G +A
Sbjct: 171 DLKPANSVCIIECDVNLDFDPPEGYVEQ---PRQVTPAVTAKPPAPDASAFIGAGQKAGG 227
Query: 536 -----------FSGEGNRLDGKKKKLISESDSE 601
F G G RLDGKKK S S S+
Sbjct: 228 SGGTGQNATSVFGGAGRRLDGKKKPSSSVSLSD 260
>Z69635-3|CAA93460.1| 342|Caenorhabditis elegans Hypothetical
protein F19B6.2a protein.
Length = 342
Score = 176 bits (428), Expect = 1e-44
Identities = 101/213 (47%), Positives = 127/213 (59%), Gaps = 13/213 (6%)
Frame = +2
Query: 2 LEQLTRLNIEYPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEGALIQI 181
L L + NI PM+FKLTN +R+THCGVLEF A EG+ LP WMM L L++G I+I
Sbjct: 57 LNLLMQYNIPMPMLFKLTNMAVQRVTHCGVLEFSAPEGQAILPLWMMQQLGLDDGDTIRI 116
Query: 182 ESVSLPVATFSKFQPLSEDFLDITNPKAVLENCLRNFSCLTTGDVIAIKYNSKVYELCVL 361
ES +LP ATF+K +P+S +FL+ITNPKAVLE LR ++CLT D I Y + E V+
Sbjct: 117 ESATLPKATFAKLKPMSLEFLNITNPKAVLEVELRKYACLTKNDRIPTSYAGQTLEFLVV 176
Query: 362 ETKPGNAVIIIECDMNVEFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRA-- 535
+ KP N+V IIECD+N++F PP GY EQ R AV P A +G +A
Sbjct: 177 DLKPANSVCIIECDVNLDFDPPEGYVEQ---PRQVTPAVTAKPPAPDASAFIGAGQKAGG 233
Query: 536 -----------FSGEGNRLDGKKKKLISESDSE 601
F G G RLDGKKK S S S+
Sbjct: 234 SGGTGQNATSVFGGAGRRLDGKKKPSSSVSLSD 266
>Z81493-10|CAB04044.2| 508|Caenorhabditis elegans Hypothetical
protein F01D5.9 protein.
Length = 508
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 32 YPMIFKLTNKKSKRLTHCGVLEFVADEGRVYLPHWMMANLVLEEG 166
YPM+ LT + +K++ L + E ++LP W+ L+L G
Sbjct: 87 YPMVIVLTPEANKKVLESNALINKSSEYDIFLP-WLGTGLLLASG 130
>AC025715-11|AAP13753.1| 516|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12b protein.
Length = 516
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 413 EFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKLISES 592
E++ V + H+ + + V M + + E +G SGE DG KL +
Sbjct: 201 EYSLDVVHAYMQHIQNTAELCVREMLKKVGRKVLEKTGKSQLSGEDFMDDGTVIKLTVDI 260
Query: 593 DSEPGTS 613
DSE GT+
Sbjct: 261 DSEEGTA 267
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 413 EFAPPVGYKEQDHVSRSNDGAVEGMDEDPAAMMPESSGFRAFSGEGNRLDGKKKKLISES 592
E++ V + H+ + + V M + + E +G SGE DG KL +
Sbjct: 872 EYSLDVVHAYMQHIQNTAELCVREMLKKVGRKVLEKTGKSQLSGEDFMDDGTVIKLTVDI 931
Query: 593 DSEPGTS 613
DSE GT+
Sbjct: 932 DSEEGTA 938
>U80839-11|AAB37912.2| 261|Caenorhabditis elegans Hypothetical
protein ZC204.3 protein.
Length = 261
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -3
Query: 378 FPGLVSRTHSS*TFELYFIAMTSPVVKHEKLRKQFSNTAFGFVMSKK 238
FP + H ++LY +A+ +P+ ++EK+ + +T V+ K
Sbjct: 73 FPQGKYQRHKCARYDLYLVALETPLAEYEKMFSESEDTDAVLVVEDK 119
>AF016447-9|AAG24009.1| 233|Caenorhabditis elegans Hypothetical
protein C54F6.4 protein.
Length = 233
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Frame = +2
Query: 32 YPMIFKLTNKKS-----KRLTHCGVLE-FVADEGRVYLPHWMMANLVLEEGALIQIESVS 193
+P+IF KK R H G + F G + LP W+ + + LI I
Sbjct: 5 FPIIFSTELKKPICLQIYRQGHVGDISGFPFLMGTLVLPFWLRYGFLRNDVMLISINCAG 64
Query: 194 LPVATFS 214
+P+A F+
Sbjct: 65 IPIAVFN 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,229,878
Number of Sequences: 27780
Number of extensions: 342879
Number of successful extensions: 1003
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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