Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10h04
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.37 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   6.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 269 NKEYKLFKCVSQISGSVCNAFIID*CIINT 180
           N+EYK ++ +S +SG     F +  C + T
Sbjct: 156 NQEYKYYQILSHLSGIFFTVFNVAQCYLTT 185


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 574 TYSSPCKVAWKRSLSAIRP 518
           TY+S C   W+ S S++RP
Sbjct: 222 TYTSICIEIWQSSESSLRP 240


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -1

Query: 121 EVSYSSVRAISVKGGTKFLLHVLIYRYILNTQVL 20
           E+SYS     +V     FL     Y Y  N Q L
Sbjct: 9   EMSYSQFENQAVLQSYNFLQEKTTYEYYENNQAL 42


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 129 YRESKEGVQNPI 164
           YRE+K+G QN I
Sbjct: 120 YRENKQGWQNSI 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,598
Number of Sequences: 336
Number of extensions: 2485
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)