Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10g23
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 38 0.001
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 36 0.005
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.008
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 34 0.024
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.042
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 33 0.042
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 31 0.17
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.23
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 0.52
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 29 0.91
SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.91
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 28 1.2
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 28 1.2
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 28 1.6
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 2.1
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 2.1
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 27 2.8
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 3.7
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 27 3.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 3.7
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 27 3.7
SPAC3H1.03 |mug151||transcriptional regulator, HCNGP-like |Schiz... 26 6.4
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 26 6.4
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 6.4
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 25 8.5
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 25 8.5
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 37.9 bits (84), Expect = 0.001
Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 2/218 (0%)
Frame = +2
Query: 11 RFGCVRFDFSAPVNKLIKNK--LTLHNIIKTYQSSVKGV*ISKIINSALKRYLIVILLGE 184
R G + F A V ++ + TL ++ Q+ ++G KI LK + LL
Sbjct: 734 RIGVSKIFFKAGVLAELEERRVATLQRLMTMLQTRIRGFLQRKIFQKRLKDIQAIKLLQ- 792
Query: 185 CVIFCNLRVI*PATS*IFLTYFIVIYFKMMTRSIKSRQVDEQLRIALEQLKNTREKYDIL 364
NL+V F T+ F + + S Q D+QL+ ++ KY++
Sbjct: 793 ----ANLQVYNE-----FRTFPWAKLFFNLRPLLSSTQNDKQLKKRDAEIIEL--KYELK 841
Query: 365 LQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSL 544
Q++ ++E E ++ N L + L E + AL+ + L+ T + D F ++
Sbjct: 842 KQQNSKSEVER-DLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETK 900
Query: 545 KITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSE 658
+ L+ + A ++L SEL + K + ++L SE
Sbjct: 901 QQNENLQRESASLKQINNELESELLE-KTSKVETLLSE 937
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 308 QLRIALEQLKNTREKYDILLQESEQNEEEML-SVISKNTDLKKQLSQLFIEHSEALEINQ 484
QL+ E++ NT+E D+ ++E EE++ S+ + T+L++Q H E L+ Q
Sbjct: 607 QLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQLAEKYHEELLDNQQ 666
Query: 485 KLQD 496
KL D
Sbjct: 667 KLYD 670
Score = 25.8 bits (54), Expect = 6.4
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +2
Query: 281 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH 460
S+K R + E+ E LK ++ + Q +E+ EE+L K DL+ +L
Sbjct: 625 SVKERSIQEEK--LNESLKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNC 682
Query: 461 SEALEINQKLQDTINTFSQCSDEFCDSLKITAEL---RHKLAEADDCISDLRSELCKLK 628
+ E Q L++ S+ D + K+T +L +++ DL SEL K K
Sbjct: 683 KQMEEEMQVLRE--GHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSK 739
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.5 bits (78), Expect = 0.008
Identities = 34/133 (25%), Positives = 63/133 (47%)
Frame = +2
Query: 290 SRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 469
S ++ + EQLK+ +E+ + L +S+ NE E L + + D K ++S L E
Sbjct: 1475 SSDAEQITKEQFEQLKSEKERTEKELADSK-NELEHLQSEAVDADGKTEISNL---EKEI 1530
Query: 470 LEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSL 649
E+ + + S E +L+ + + L AD+ I+ LRS+L K+ +
Sbjct: 1531 HELRSDKEGLVQQVQNLSAELA-ALREHSPTQGSLENADE-IARLRSQLESTKQYYEKEK 1588
Query: 650 YSELVQSEPSLVA 688
+E++ + LVA
Sbjct: 1589 ETEILAARSELVA 1601
Score = 34.3 bits (75), Expect = 0.018
Identities = 31/148 (20%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Frame = +2
Query: 278 RSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIE 457
R + ++QLR + ++L + E+YD+L E + E E+ + +K+ L +
Sbjct: 55 RIVTEVNYEQQLRNSEKKLLQSNERYDLLEDERKLLENEL-------SQIKEYLREKSSS 107
Query: 458 HSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQ 637
+ L L+ Q D+ +LK TA+L++ L++ + + + + LK+
Sbjct: 108 YDTVLHDCSSLKSVNEALKQAQDQ---NLKQTAQLQNLLSDKEKEVEKKITIIKDLKDAL 164
Query: 638 PQSLYS--ELVQSEPSLVAVDTALNFDI 715
S + EL ++ ++ T F++
Sbjct: 165 ASSTHQVLELQHTQQEKASLQTNYEFEL 192
Score = 27.5 bits (58), Expect = 2.1
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 326 EQLKNTREKYDILLQESEQNEEEMLSVI-SKNTDLKKQLSQLFIEHSEALEINQKLQDTI 502
++LK + L +Q+ M + I S N + + + +S LE++ L+
Sbjct: 796 DKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDSM---NSRILELSNDLRVAN 852
Query: 503 NTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKE 631
+ S+CSD D ++T + L E + L+S + +LK+
Sbjct: 853 SKLSECSD---DVRRLTLQNSFDLREHQTLVLQLQSNITELKQ 892
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 33.9 bits (74), Expect = 0.024
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = +2
Query: 296 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALE 475
Q +E++ ++ ++L E +QN+E+ +++ L+ Q SQL S +E
Sbjct: 262 QREERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVALELQSSQL----SRQIE 317
Query: 476 INQKLQDT-INTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSL 649
++K + + +N S+ + + +E+ K DL + LK Q+ QSL
Sbjct: 318 FSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSEADDLNKRIMLLKNQK-QSL 375
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.1 bits (72), Expect = 0.042
Identities = 26/121 (21%), Positives = 58/121 (47%)
Frame = +2
Query: 275 TRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFI 454
T SIK+ ++++ LR + LK++R + Q EEEM+ + N + QL+
Sbjct: 340 TLSIKNEKLEKLLRNTIGSLKDSRTS-------NSQLEEEMVELKESNRTIHSQLTDAES 392
Query: 455 EHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQ 634
+ S + N+ L+ +I+ + + K+ ++ +L EA ++ +L ++ +
Sbjct: 393 KLSSFEQENKSLKGSIDEY---QNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSE 449
Query: 635 Q 637
+
Sbjct: 450 R 450
Score = 29.1 bits (62), Expect = 0.69
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Frame = +2
Query: 305 EQLRIALEQ-LKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEIN 481
E L I+LE+ L N R+K LL + E + KN+ L +++ + +S + +
Sbjct: 1417 ESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEKIESI---NSSLDDKS 1473
Query: 482 QKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQ 634
+L + +SL + ++ +L EA + I S + +L +
Sbjct: 1474 FELASAVEKLGALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQELDHE 1524
Score = 28.3 bits (60), Expect = 1.2
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Frame = +2
Query: 263 FKMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLS 442
FK + S ++++ + +QLK+T K L E E++ ++ +N DL+ +L
Sbjct: 611 FKKLNES--HQELENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLL 668
Query: 443 QLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEAD---DCISDLRSE 613
+L E +++L Q+ D++ Q E D K LR EA + I +L+ +
Sbjct: 669 KL-EESNKSLIKKQEDVDSLEKNIQTLKE--DLRKSEEALRFSKLEAKNLREVIDNLKGK 725
Query: 614 LCKLKEQQPQSLYSEL 661
L E Q L+S L
Sbjct: 726 HETL-EAQRNDLHSSL 740
Score = 28.3 bits (60), Expect = 1.2
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 11/115 (9%)
Frame = +2
Query: 323 LEQLKNTREKYDILLQESEQ---------NEEEMLSVISKNTDLK--KQLSQLFIEHSEA 469
L QL + YD L QES Q E+++L ++ ++ K +L IE S++
Sbjct: 884 LTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKS 943
Query: 470 LEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQ 634
++ +KL S +E + ++ KL E S L +++ LK +
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNK 998
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 33.1 bits (72), Expect = 0.042
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 329 QLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLS-QLFIEHSEALEINQK---LQD 496
QL ++ +L++S EE++ S+ D+ + L Q+ + +E + +N L+D
Sbjct: 1137 QLSERIKEISEMLEQSIATEEKLRRKNSELCDIIEALKYQIQDQETEIISLNADNLDLKD 1196
Query: 497 TINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKL 625
T + + +F D I + HK++ D ++ L+ E CK+
Sbjct: 1197 TNGVLEKNASDFIDFQGIKSRYEHKIS---DLLNQLQKERCKV 1236
Score = 28.3 bits (60), Expect = 1.2
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 299 VDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEI 478
V E+L Q+ EKY+ L E + EE++ +K T++ LS L + L
Sbjct: 900 VHERLSSLENQVTIADEKYEFLYAEKQSIEEDL---ANKQTEI-SYLSDLSSTLEKKLSS 955
Query: 479 NQKLQDTINTFSQCSDEFCDSLKITAELRHK---LAEADDCISDLRSELCKLKEQ 634
+K + TI+ S+ + D L I A+ +H L+ + I++ + +L E+
Sbjct: 956 IKKDEQTIS--SKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEK 1008
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 31.1 bits (67), Expect = 0.17
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Frame = +2
Query: 323 LEQLKNTREKYDILLQESEQNEEEML---SVISKNTDLKKQLSQLFIEHSEALEINQKLQ 493
LEQLK T + D L +E+E+N++ + S + K+ D K L++ ++ L +
Sbjct: 651 LEQLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIESLNDQLSQLKTEM 710
Query: 494 DTINTFSQCSDEFCDSLK-----ITAELRHKLAEADDCISDLRSELCKLKEQQPQ 643
+++ T + ++ +LK L KL E + +S S +++E+ Q
Sbjct: 711 ESVTTSKESLADYLSNLKERHNDELDSLNKKLREFEGILSSNSSLKSEIEERNNQ 765
Score = 29.5 bits (63), Expect = 0.52
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 347 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSD 526
EK++ ++E+E++ + K TD QLS+ + + + QK T+ + +
Sbjct: 581 EKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNKAK 640
Query: 527 EFCDSLKITAELRHKLAEADDCISDLRSE 613
E DS T+ L +L + + LR E
Sbjct: 641 E--DSTSKTSNLLEQLKMTEAEVDSLRKE 667
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.23
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 335 KNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 469
K TR+ Y+ Q++ + EE++ +++K LKK + L E SEA
Sbjct: 425 KKTRQSYE---QQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEA 466
Score = 25.8 bits (54), Expect = 6.4
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -3
Query: 499 RILQLLIDLKSFTVFNEELRQLFFKVS 419
RILQL DLKS NE R L K+S
Sbjct: 873 RILQLKSDLKSIRNNNERKRNLQNKIS 899
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.5 bits (63), Expect = 0.52
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +2
Query: 254 VIYFKMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKK 433
+++ + T+ K+++ + +L E L+N R KY+ L+E E ++ + +
Sbjct: 148 LVFDALSTKIQKAKKEESKLE---EDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVV 204
Query: 434 QLSQLFIE-HSEALEINQKLQDTINTFSQCSD 526
+L Q+ I H ++L++ + L+ +N FS+ D
Sbjct: 205 RLLQMQIRFHQKSLDLLKGLE--MNGFSKKRD 234
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 28.7 bits (61), Expect = 0.91
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 281 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH 460
++K+R + + L+ +N Y LQE E + S + ++ KQ+ +++ +H
Sbjct: 495 AMKARDILMTEKKTLKLAENKEHDYIGKLQEREHALTKYESSLKAELEVYKQIKEIYGKH 554
Query: 461 S-EALEINQKLQDTINTFSQCSDEFCDSLKITAE 559
S E L ++ LQ +Q ++ +S++ + E
Sbjct: 555 SVEVLTEDKHLQVKQTKLTQKLEDLIESVQKSGE 588
>SPBP8B7.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 28.7 bits (61), Expect = 0.91
Identities = 28/125 (22%), Positives = 60/125 (48%)
Frame = +2
Query: 332 LKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTF 511
L+N +E+ + L+E E+ ++ N L ++ L + E N+K +N+F
Sbjct: 22 LQNLKEETENQLKELEKKRSQLHKEEQINLQLVYAINDLRSKTKELKAENEKEDTFLNSF 81
Query: 512 SQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEPSLVAV 691
+ S + + KI +LR + + ++ + ++ K E+Q +S S+L ++ S +
Sbjct: 82 N-ASGDLTANKKI--QLREQSRKLEESLLSYHKKV-KEMEKQHRSASSKLELAKLSAQQL 137
Query: 692 DTALN 706
T +N
Sbjct: 138 QTNVN 142
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 287 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKK 433
K +++ EQ R Q ++ D+L + + ++E + KNTD+KK
Sbjct: 372 KLKELHEQNRRLQRQKSLATQEIDLLRENLKSYDDEEAILSEKNTDMKK 420
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 28.3 bits (60), Expect = 1.2
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 9/143 (6%)
Frame = +2
Query: 287 KSRQVDE---QLRIALEQLKNTREKYDILLQESEQNEE----EMLSVISKNTDLKKQLSQ 445
K + +DE +L A + L + + I E+EQ E + L+ ++ D+KK+L +
Sbjct: 75 KEKPLDEKVKELENANKTLSDLVRRIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEK 134
Query: 446 LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKL 625
+ E N+ LQD + E D +K EL K + + SEL +
Sbjct: 135 SDETVCKLKEENENLQDMLRNVGNELVESRDEIK---ELIEKQKVQKESVKSHESELSSV 191
Query: 626 KEQQ--PQSLYSELVQSEPSLVA 688
+ P++ EP +++
Sbjct: 192 MSSEILPKASSDSAGSFEPPVIS 214
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 326 EQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKL-QDTI 502
+QL+ ++ D+LLQE E E + D+ + S++ + S +KL D +
Sbjct: 215 QQLQELEQENDVLLQEFEHTMERLRDTGKSLADITRLQSEISAQLSIQSSAAEKLYDDAL 274
Query: 503 NTFSQCS 523
N S
Sbjct: 275 NVMDSLS 281
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 2.1
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Frame = +2
Query: 290 SRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 469
+ ++ + LR AL++ K YD L +EE ++ S+ +L KQ+++ + E
Sbjct: 151 TEEMSKTLR-ALKEEKKMYFNYDNFLSSQTVHEENTAALDSEIDELMKQINEKEEKIEEI 209
Query: 470 LEINQKLQDTINTFSQCSD-------EFCDSLKITAELRHKLAEADDCIS-DLRSELCKL 625
+ KLQ + + + EF ++L + L DC + + KL
Sbjct: 210 SDETDKLQKLLRELDEEKEKVYAEEQEFYNNLNQFQIKKLSLERQYDCANLEFEHNSRKL 269
Query: 626 KEQQPQSLYSEL 661
++ Q +++S++
Sbjct: 270 EKLQKMNVFSDI 281
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 IYFKMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISK-NTDLKK 433
IYF ++ +EQL L QL+N + + + LQE E +LS + + L+K
Sbjct: 618 IYFSENVEMDLVKRKEEQLNAQLSQLENLQNE-ERKLQEKVNEHESLLSRTNDILSTLRK 676
Query: 434 QLSQLFIEHSEALEINQKLQ 493
+ + I E ++ ++++
Sbjct: 677 ERDEKLIPIHEWQQLQERIE 696
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 2.8
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Frame = +2
Query: 278 RSIKSRQVDE-QLRIALEQLKNTREKYDILLQESEQNEEEMLS-------VISKNTDLKK 433
+S+K +Q D+ Q ++LKN E Y L +++E ++ +S + ++NT L K
Sbjct: 68 QSMKKQQKDKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVK 127
Query: 434 QLSQLFIEHSEALEINQKLQDTINTFSQCSDE 529
L+ L +SE L++ +K+ + Q + E
Sbjct: 128 TLNSL---NSEFLQLLRKIAINVKEGRQLTTE 156
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 3.7
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = +2
Query: 305 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQ 484
EQ ++AL + + E+ Q ++++ E L + ++ KK + A E
Sbjct: 110 EQRQVALREAREAEEELQRARQYNDRSTSEALELEAR---AKKAAQDAELASERAREAQS 166
Query: 485 KLQDTINTFSQCSDEFCDSLKIT---AELRHKLAEADDCISDLRSEL 616
++ + + + + E + AEL+H+LA+A+ + S+L
Sbjct: 167 SIERSASLREKQAREEAERAATALREAELKHRLAQANADVDVANSKL 213
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +2
Query: 356 DILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFC 535
+ + +E E ++ + + T+ + E E INQ LQD I+ Q + +F
Sbjct: 678 EAIRKELENSKYQQQLSTDRLTNANNDVEAFKKEAKELRSINQNLQDIISRQDQRASKFA 737
Query: 536 DSLKITAELRHKL 574
+ L L +L
Sbjct: 738 EELLHVNSLAERL 750
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 26.6 bits (56), Expect = 3.7
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +2
Query: 293 RQVDEQLRIALEQLKNTREKYDILLQESEQNEE----EMLSVISKNTDLKKQLSQLFIEH 460
+ VDE+LR+ ++ + E ++ Q E NE+ +++S+ S+N L Q
Sbjct: 573 QHVDEKLRLEKKEQLSYLEILKVIEQMLESNEQKFKKQIVSLASENAKLAAQRDAAVENA 632
Query: 461 SEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQP 640
+ + + QK + T T ++ K+ E++ L EA +EL +L +Q
Sbjct: 633 NYSRSLIQK-KTTDETVGSLIEKVG---KLEYEVQGTLEEATSYYQK-NTELQQLLKQNE 687
Query: 641 QSLYSELVQSEPSLVAVD 694
+ SEL++S + VD
Sbjct: 688 SA--SELLKSRNEKLCVD 703
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 392 EMLSVISKN-TDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRH 568
+ +SV+ + TD+K +L E EA+ QKL + S +++ LK ++ L++
Sbjct: 663 DKISVLQRQLTDVKDELDVSEEEREEAIVAGQKLSASFELMS--NEKQALELKYSS-LKN 719
Query: 569 KLAEADDCISDLRSELCKLKEQ 634
+L A + + EL +L ++
Sbjct: 720 ELINAQNLLDRREEELSELSKK 741
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 605 RSELCKLKEQQPQSLYSELVQSEPSLVAVDTALN 706
R +LCK +Q+P+S+Y + E + + A+N
Sbjct: 138 RIQLCKETKQEPRSVYGRIQALEDASLISKVAIN 171
>SPAC3H1.03 |mug151||transcriptional regulator, HCNGP-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 377 EQNEEEMLSVISKNTDLKKQLSQLF--IEHSEALEINQKLQDTINTF 511
+ EEE S++++N D+K + + I +S E++ +L+ I F
Sbjct: 7 DSEEEEQTSLVNENNDIKGRSEEPHWKIPNSPKAEVDTELEKKIKQF 53
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 404 VISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTF-SQCSDEFCDSLKITAELRHKLAE 580
++S +TD + F L+I + L +TIN F +Q D L + E R+ +
Sbjct: 445 IVSDHTDFTAIVKSYFESVDNPLDIPKPLTNTINKFVNQSKDNLNPDLWV--EARNAMLM 502
Query: 581 ADDCISDL 604
A + + D+
Sbjct: 503 AQEHVFDI 510
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 557 ELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEP 676
+++ L+ + C+ DL S LC E +L E S+P
Sbjct: 570 DVKDDLSSSTSCVMDLLSSLCSFTE--VMNLMQETANSDP 607
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +2
Query: 365 LQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSL 544
L E+++N +L V + +Q+++LFI+H+ I + D+ + + D
Sbjct: 387 LTEADRNAARVLFVHRNVPGVLRQVNELFIDHN----IKSQFSDSRGDIAYLVADISDCT 442
Query: 545 KITAELRHKLAEADDC 592
+ E H+ E+ C
Sbjct: 443 PGSLEALHQKLESLPC 458
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.4 bits (53), Expect = 8.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 323 LEQLKNTREKYDILLQESEQNEEEMLSV 406
LE L+N E + + E+ EEE++S+
Sbjct: 519 LESLRNNTEWISSVAENGEKTEEELISI 546
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,421,595
Number of Sequences: 5004
Number of extensions: 43746
Number of successful extensions: 197
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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