Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10g23
(735 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 39 0.004
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 36 0.021
At3g22790.1 68416.m02873 kinase interacting family protein simil... 34 0.11
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 34 0.11
At5g45310.1 68418.m05562 expressed protein 33 0.20
At5g42570.1 68418.m05183 expressed protein low similarity to SP|... 33 0.26
At5g06670.1 68418.m00753 kinesin motor protein-related 32 0.34
At4g21270.1 68417.m03074 kinesin-like protein A (KATA) 32 0.45
At4g02710.1 68417.m00366 kinase interacting family protein simil... 32 0.45
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 31 0.60
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 31 1.0
At4g35070.1 68417.m04978 expressed protein 30 1.4
At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28 ... 30 1.4
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 30 1.8
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 30 1.8
At1g11420.1 68414.m01312 agenet domain-containing protein contai... 30 1.8
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 29 2.4
At4g22950.1 68417.m03313 MADS-box protein (AGL19) MADS-box prote... 29 2.4
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 29 2.4
At4g26020.1 68417.m03747 expressed protein weak similarity to ca... 29 3.2
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 29 3.2
At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 29 4.2
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 29 4.2
At1g65010.1 68414.m07368 expressed protein similar to endosome-a... 29 4.2
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 4.2
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 29 4.2
At5g65500.1 68418.m08240 protein kinase family protein contains ... 28 5.6
At5g55520.1 68418.m06915 expressed protein weak similarity to ph... 28 5.6
At5g41810.1 68418.m05090 expressed protein 28 5.6
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 28 5.6
At5g37415.1 68418.m04501 MADS-box family protein contains Pfam p... 28 5.6
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 28 5.6
At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DN... 28 7.4
At3g12540.1 68416.m01560 expressed protein contains Pfam profile... 28 7.4
At3g02950.1 68416.m00290 expressed protein 28 7.4
At1g56080.1 68414.m06439 expressed protein 28 7.4
At1g47900.1 68414.m05334 expressed protein 28 7.4
At5g47660.1 68418.m05884 DNA-binding protein-related similar to ... 27 9.8
At3g20780.1 68416.m02628 topoisomerase 6 subunit B (TOP6B) nearl... 27 9.8
At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein heli... 27 9.8
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/104 (26%), Positives = 56/104 (53%)
Frame = +2
Query: 305 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQ 484
E+ ++A+E REK + +++ESE+ EEM SV+++N + SQL I+H L +
Sbjct: 713 ERDKLAMEA-NFAREKLEGIMKESERKREEMNSVLARNI----EFSQLIIDHQRKL---R 764
Query: 485 KLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSEL 616
+ ++++ + S + + + + + L+ A+ SD S L
Sbjct: 765 ESSESLHAAEEISRKLSMEVSVLKQEKELLSNAEKRASDEVSAL 808
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 36.3 bits (80), Expect = 0.021
Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Frame = +2
Query: 278 RSIKSRQVDEQLRIALEQLKNTREKYDI---LLQESEQNEEEMLSVISKNTDLKKQLSQL 448
++I S+ V+ + LEQ +NT ++ L++S + +E LS + + + ++ S +
Sbjct: 185 KAISSKNVETMNK--LEQTQNTIQELMAELGKLKDSHREKESELSSLVEVHETHQRDSSI 242
Query: 449 FI-EHSEALEINQKLQDTIN-TFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCK 622
+ E E +E ++KL +N T + +E + AEL +++ EA + I +L SE +
Sbjct: 243 HVKELEEQVESSKKLVAELNQTLNNAEEEKKVLSQKIAELSNEIKEAQNTIQELVSESGQ 302
Query: 623 LKE 631
LKE
Sbjct: 303 LKE 305
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/118 (19%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +2
Query: 281 SIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH 460
S+K ++ + ++ ++ + + ++ ++ E E S++ + +++ S E
Sbjct: 12 SLKVSEISDVIQQGQTTIQELISELGEMKEKYKEKESEHSSLVELHKTHERESSSQVKEL 71
Query: 461 SEALEINQKL-QDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKE 631
+E ++KL D + + +E + AEL +++ EA + + +L SE +LKE
Sbjct: 72 EAHIESSEKLVADFTQSLNNAEEEKKLLSQKIAELSNEIQEAQNTMQELMSESGQLKE 129
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Frame = +2
Query: 287 KSRQVDEQLRIALEQLKNTREKYDIL-LQESEQNEEEMLSVISKNT-DLKKQLSQLFIEH 460
+S V ++ +L + T ++ + E E E IS T DLK +
Sbjct: 305 ESHSVKDRDLFSLRDIHETHQRESSTRVSELEAQLESSEQRISDLTVDLKDAEEENKAIS 364
Query: 461 SEALEINQKLQDTINTFSQCSDEFCD----SLKITAELRHKLAEADDCISDLRSELCKLK 628
S+ LEI KL+ NT + DE + + +EL + AD ++D++ L +
Sbjct: 365 SKNLEIMDKLEQAQNTIKELMDELGELKDRHKEKESELSSLVKSADQQVADMKQSLDNAE 424
Query: 629 EQQ 637
E++
Sbjct: 425 EEK 427
>At3g22790.1 68416.m02873 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 33.9 bits (74), Expect = 0.11
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Frame = +2
Query: 266 KMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ 445
+++ + K + V++Q + + + + D L + ++E + K +L+K S
Sbjct: 378 EVLAGAAKLKTVEDQCTLLESSNETLKLEADGLTHKLAAKDQE---IFQKQNELEKFQSL 434
Query: 446 LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCIS---DLRSEL 616
+ EHS LEI L+ + +SQ +E IT+EL+ ++ D + L ++
Sbjct: 435 IEDEHSRYLEIEVSLKTLQSLYSQSQEE---QKVITSELQSRIGMLRDLETRNLKLEGDI 491
Query: 617 CKLKEQQPQSLYSELVQSEPSLVAVDT 697
+KE+ Q+L SEL ++ S++ ++T
Sbjct: 492 SSVKEEN-QNL-SEL--NDSSMIFLET 514
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +2
Query: 374 SEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKIT 553
S+Q S +S + K+ +QL + H E ++I QKL + +T S+ D+ + K
Sbjct: 43 SKQRSTPRRSRLSSESVCDKE-TQLMLVHKEFMKIKQKLDNAESTRSRALDDLSKAKKTM 101
Query: 554 AELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEPSLVAVDTAL-NFDITTIDL 730
+L +KL + +++++ Q + + S P +D A + TT++L
Sbjct: 102 EDLSNKLETVNKSKQSAIDTKETVQQREEQLEHDKCHGSPPHHHELDVAREQYISTTVEL 161
>At5g45310.1 68418.m05562 expressed protein
Length = 352
Score = 33.1 bits (72), Expect = 0.20
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +2
Query: 233 IFLTYFIVIYFKMMTRSIKSRQVDEQLRIALEQL--------KNTRE---KYDILLQESE 379
+ L F + +F + R Q LR LE L KN RE +Y I+ Q+ +
Sbjct: 70 VLLFTFPIRFFASIPRERLLEQSIYDLRYELESLEWNRKEIEKNLREAIKEYRIMEQDLD 129
Query: 380 QNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQK 487
+ E+E ISK L+ +L +L E+ + +E+N K
Sbjct: 130 ELEDEHDEAISKIEKLEAELQELKEENLQLMEVNGK 165
>At5g42570.1 68418.m05183 expressed protein low similarity to
SP|P51572 B-cell receptor-associated protein 31 (6C6-AG
tumor-associated antigen) (DXS1357E) {Homo sapiens}
Length = 218
Score = 32.7 bits (71), Expect = 0.26
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 305 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQ 484
E+++ E++ + K L ESE +E+ + L+KQ +E+ LE NQ
Sbjct: 140 EEVKALGEEIAALKAKIKTLESESESKGKELKGAQGETEALRKQADGFLMEYDRLLEDNQ 199
Query: 485 KLQDTINT 508
L++ + +
Sbjct: 200 NLRNQLES 207
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 32.3 bits (70), Expect = 0.34
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Frame = +2
Query: 305 EQLRIALEQLKNTREKYDILLQESE---QNEEEMLSVISKNTDLK----------KQLSQ 445
EQ + E++ + +L +E+ QNEE +I+ N D+K KQ+
Sbjct: 646 EQQKTLSEEMAQQSRSFKLLSEEAAKAPQNEEIKAEIINLNGDIKAKNDQIATLGKQILD 705
Query: 446 LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAE----LRHKLAEADDCISDLRSE 613
I + L+ + +Q +Q +++ C L++ A ++ +L E DL+ E
Sbjct: 706 FVIASHDELDKSDIVQAVSEMRAQLNEK-CFELEVKAADNRIIQEQLTEKTSFCEDLQEE 764
Query: 614 LCKLKEQQPQSL 649
+ LK+Q +L
Sbjct: 765 VANLKQQLSDAL 776
>At4g21270.1 68417.m03074 kinesin-like protein A (KATA)
Length = 793
Score = 31.9 bits (69), Expect = 0.45
Identities = 33/143 (23%), Positives = 62/143 (43%)
Frame = +2
Query: 296 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALE 475
Q E L+++LE ++ +KY+ E+ EEE+ + ISK L++ + L H + +
Sbjct: 118 QEKENLKVSLE---SSEQKYNHKELEARTKEEELQATISK---LEENVVSL---HEKLAK 168
Query: 476 INQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYS 655
QD I + + + K+ A L +L + + K K + +Y
Sbjct: 169 EESSTQDAIECHRREKEARVAAEKVQASLGEELDKVKE-----EKMAAKQKVTSLEDMYK 223
Query: 656 ELVQSEPSLVAVDTALNFDITTI 724
L + SL ++ L D+ T+
Sbjct: 224 RLQEYNTSLQQYNSKLQTDLETV 246
>At4g02710.1 68417.m00366 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1111
Score = 31.9 bits (69), Expect = 0.45
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = +2
Query: 272 MTRSIKSRQVDEQLR-IALEQLKNTREKYDILLQESEQNEEEMLSVISKN----TDLKKQ 436
+ RS+ + D++ I Q NT + L+++E++ + K +LK+
Sbjct: 326 LKRSLAKAETDKETALIQYRQCLNTISNLEERLRKAEEDARLINERAEKAGVEVENLKQT 385
Query: 437 LSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLR--S 610
+S+L I+ EA E+ + Q +N + + + + T L H E +D ++ L+
Sbjct: 386 VSKL-IKDKEASEL--QFQQCLNIIASLKVKLHHAQEETQSLSH---EIEDGVAKLKFSE 439
Query: 611 ELCKLKEQQPQSLYSEL 661
E C L E+ Q+L+SEL
Sbjct: 440 EKCLLLERSNQNLHSEL 456
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 31.5 bits (68), Expect = 0.60
Identities = 22/105 (20%), Positives = 51/105 (48%)
Frame = +2
Query: 299 VDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEI 478
++ Q R LE L+N E Y L+ +E++ + +++ S+ +E +
Sbjct: 402 LERQRRTDLEALRNLEENYQQLINRKNDLDEQIKRFKDRQGEIETSSSKY---KNETTSL 458
Query: 479 NQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSE 613
+L+ ++ ++ + +A+L+ ++AE +D +SDL +E
Sbjct: 459 KTELR-------ALQEKHVNAREASAKLKTRIAELEDQLSDLTAE 496
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 30.7 bits (66), Expect = 1.0
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Frame = +2
Query: 329 QLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINT 508
QLK E Y L S + E E+ S+ K +L+ +L H EAL Q+L++ +
Sbjct: 786 QLKCMVESYRSLETRSSELEIELTSLKGKIENLEDELHDEKENHREALAKCQELEEQLQR 845
Query: 509 FSQ-CSDEFCDSLKITAELR--HKLAEADDCISDLRSELCKL-KEQQPQSLYSELVQSEP 676
+Q C + C ++ + + ++LA A + +++ + + L K+ + +E V S P
Sbjct: 846 NNQNCPN--CSVIEDDPKSKQDNELAAAAEKLAECQETILLLGKQLKSMCPQTEQVASSP 903
Query: 677 S 679
S
Sbjct: 904 S 904
>At4g35070.1 68417.m04978 expressed protein
Length = 265
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 299 VDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEH---SEA 469
+ EQ + +E + E +LL Q EEEM ++KN +L+ L ++ +E+
Sbjct: 100 LQEQRKREMEMILRKMESKALLLMS--QKEEEMSKALNKNMELEDLLRKMEMENQTWQRM 157
Query: 470 LEINQKLQDTINT 508
N+ + T+NT
Sbjct: 158 ARENEAIVQTLNT 170
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +2
Query: 275 TRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFI 454
++S + Q+++Q + + +K E+ +LQE + E EM+ + + +SQ
Sbjct: 70 SQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMI-LRKMESKALLLMSQKEE 128
Query: 455 EHSEALEINQKLQDTI 502
E S+AL N +L+D +
Sbjct: 129 EMSKALNKNMELEDLL 144
>At3g06530.1 68416.m00757 BAP28-related similar to Protein BAP28
(Swiss-Prot:Q9H583) [Homo sapiens]
Length = 1830
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Frame = +2
Query: 269 MMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQE-----SEQNEEEMLSVISKNTDLKK 433
M TRS R LR + L N +E+Y +LL E +E E+ LSV S D+ K
Sbjct: 1757 MQTRSESVRSRMLSLRSVKQMLDNLKEEYLVLLAETIPFLAELLEDVELSVKSLAQDIIK 1816
Query: 434 QLSQL 448
Q+ ++
Sbjct: 1817 QMEEM 1821
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/78 (23%), Positives = 40/78 (51%)
Frame = +2
Query: 284 IKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHS 463
IK ++ + +++L+ + YD LLQ+ E+ EE+ + + +KQ Q+ S
Sbjct: 683 IKLEELSQMYESTVDELQTVKLDYDDLLQQKEKLGEEVRDMKERLLLEEKQRKQM---ES 739
Query: 464 EALEINQKLQDTINTFSQ 517
E ++ + L+++ N +
Sbjct: 740 ELSKLKKNLRESENVVEE 757
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Frame = +2
Query: 272 MTRSIKSR-QVDEQLRIALEQL--KNTREKYDILLQESEQNEEEMLSVISKNTD-LKKQL 439
M RS +S D+ + ALE L K+ K +L++ + + + ++ D L+ Q+
Sbjct: 433 MRRSCRSETDEDDHDQKALEDLVKKHVDAKDTHILEQKITDLYNEIEIYKRDKDELEIQM 492
Query: 440 SQLFIE--------HSEALEINQ-KLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDC 592
QL ++ H + ++ Q +LQ+ + +CS D ++ ++ AE
Sbjct: 493 EQLALDYEILKQQNHDISYKLEQSQLQEQLKIQYECSSSLVDVTELENQVESLEAELKKQ 552
Query: 593 ISDLRSELCKLKEQQPQ 643
+ LC++KE + Q
Sbjct: 553 SEEFSESLCRIKELESQ 569
>At1g11420.1 68414.m01312 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 604
Score = 29.9 bits (64), Expect = 1.8
Identities = 34/141 (24%), Positives = 67/141 (47%)
Frame = +2
Query: 251 IVIYFKMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLK 430
+V YF ++ + K + D + + QL + ++ + L ++ N LS I K LK
Sbjct: 452 MVTYFGLLEK-FKDLEAD----VPVSQLNSLKDSFSEL-EKHGFNVTTPLSRIDKLLALK 505
Query: 431 KQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRS 610
+ QL+I E+ ++ N FS+ EF D + E++HK+ E + L+
Sbjct: 506 DR--QLYIME----ELKGFDKEMTNEFSKAKQEFDDMEQKILEVKHKIIELQRQEAALK- 558
Query: 611 ELCKLKEQQPQSLYSELVQSE 673
E + +++Q + + ++ Q E
Sbjct: 559 EQKEAEKEQKDAAWKKICQME 579
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/133 (19%), Positives = 68/133 (51%), Gaps = 4/133 (3%)
Frame = +2
Query: 287 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQL---FIE 457
K+++++EQL A + ++ + ++++ E + +++ ++ TDLK+++ L +
Sbjct: 325 KAKELEEQLEEANKLERSASVSLESVMKQLEGSNDKLHDTETEITDLKERIVTLETTVAK 384
Query: 458 HSEALEINQKLQDTINTFSQCSDEFCDSLKITAE-LRHKLAEADDCISDLRSELCKLKEQ 634
E LE++++ ++ +++ + LK E ++ + A D S + +L E+
Sbjct: 385 QKEDLEVSEQRLGSVEEEVSKNEKEVEKLKSELETVKEEKNRALKKEQDATSRVQRLSEE 444
Query: 635 QPQSLYSELVQSE 673
+ L S+L S+
Sbjct: 445 K-SKLLSDLESSK 456
>At4g22950.1 68417.m03313 MADS-box protein (AGL19) MADS-box protein
AGL14, Arabidopsis thaliana, gb:U20184
Length = 219
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 32/48 (66%)
Frame = +2
Query: 293 RQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQ 436
+Q++ QL +L +++ +KY +L +E E+ + E +++ +N DLK++
Sbjct: 124 QQLENQLDRSLSRIR--AKKYQLLREEIEKLKAEERNLVKENKDLKEK 169
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 29.5 bits (63), Expect = 2.4
Identities = 33/148 (22%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Frame = +2
Query: 269 MMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ- 445
M + + ++DE +++ E+ K + + + + ++ + + S +++ LK QLS+
Sbjct: 119 MEINASEDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEVQKLKAQLSES 178
Query: 446 -----LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRS 610
L +E +E L + +KL+ + F E + +I + +L A+ + LRS
Sbjct: 179 ENVENLRMELNETLSLVEKLRGEL--FDAKEGE-AQAHEIVSGTEKQLEIANLTLEMLRS 235
Query: 611 ELCKLKEQQPQSLYSELVQSEPSLVAVD 694
+ K+ E SL +EL QS+ + +++
Sbjct: 236 DGMKMSE-ACNSLTTELEQSKSEVRSLE 262
>At4g26020.1 68417.m03747 expressed protein weak similarity to
cardiac muscle factor 1 [Gallus gallus] GI:14422164
Length = 247
Score = 29.1 bits (62), Expect = 3.2
Identities = 31/141 (21%), Positives = 64/141 (45%)
Frame = +2
Query: 296 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALE 475
Q+ E +I L ++ R K ++ E + E+L + +KN LK++ +L ++E+L
Sbjct: 18 QIYEDFKIGLNEINVYRSKSNV-----ESSRREVLEISNKN--LKEENERLKKLYTESL- 69
Query: 476 INQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYS 655
D + ++C + ++ E + K E + + LR + E+ + S
Sbjct: 70 --NNFADQLEHRTKCHSLKEELKRVNDENKSKEHEHRNALESLRQKHVTKVEELEYKIRS 127
Query: 656 ELVQSEPSLVAVDTALNFDIT 718
LV+ + + +D L D+T
Sbjct: 128 LLVEKATNDMVID-RLRQDLT 147
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/76 (23%), Positives = 37/76 (48%)
Frame = +2
Query: 347 EKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSD 526
EK L + + EE++ K++ LK++L Q + A +N+KL+ + + S
Sbjct: 269 EKLRDLEGKIKSYEEQLAEASGKSSSLKEKLEQTLGRLAAAESVNEKLKQEFDQAQEKSL 328
Query: 527 EFCDSLKITAELRHKL 574
+ ++ AE ++L
Sbjct: 329 QSSSESELLAETNNQL 344
>At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to
RING finger rngB protein, cytosolic - Dictyostelium
discoideum, PIR:S68824; contains Pfam profiles PF01344:
Kelch motif, PF00887: Acyl CoA binding protein (ACBP)
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
Frame = +2
Query: 275 TRSIKSR-QVDEQLRIALEQLKNTREKYDILLQESE----QNEEEMLSVISKNTDLKKQL 439
TR I+S +V+ + + LK+ +E+ + L + + Q +EE+ + ++NT+L K+L
Sbjct: 512 TRDIESEIKVEGKADRIITTLKSEKEEVEASLNKEKIQTLQLKEELAEIDTRNTELYKEL 571
Query: 440 ----SQLFIEHS-------EALEINQKLQDTINTFSQ 517
+QL E S E E+ QKLQ T+ T +
Sbjct: 572 QSVRNQLAAEQSRCFKLEVEVAELRQKLQ-TMETLQK 607
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = +2
Query: 296 QVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDL----KKQLSQLFIEHS 463
+++ +L I E+ K +E+Y+ L +Q E S ++ DL K +L + E
Sbjct: 473 KLESELAIVHEEWKEAKERYERNLDAEKQKNEISASELALEKDLRRRVKDELEGVTHELK 532
Query: 464 EALEINQKLQ 493
E+ NQ LQ
Sbjct: 533 ESSVKNQSLQ 542
>At1g65010.1 68414.m07368 expressed protein similar to
endosome-associated protein (GI:1016368) [Homo sapiens];
similar to Centromeric protein E (CENP-E protein)
(Swiss-Prot:Q02224) [Homo sapiens]
Length = 1318
Score = 28.7 bits (61), Expect = 4.2
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 9/155 (5%)
Frame = +2
Query: 266 KMMTRSIKS-RQVDEQLRIALEQLKNTREKY---DILLQESEQNEEEMLSVISKNTDLKK 433
K +T I S R+ + + +E+L +E + LQ Q EE+ + K
Sbjct: 599 KNVTAEISSLREWEGSVLEKIEELSKVKESLVDKETKLQSITQEAEELKG---REAAHMK 655
Query: 434 QLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRS- 610
Q+ +L ++ ++ KLQ + ++ LK EL D ++DL+S
Sbjct: 656 QIEELSTANASLVDEATKLQSIVQESEDLKEKEAGYLKKIEELSVANESLADNVTDLQSI 715
Query: 611 --ELCKLKEQQPQSL--YSELVQSEPSLVAVDTAL 703
E LKE++ L EL + SLV +T L
Sbjct: 716 VQESKDLKEREVAYLKKIEELSVANESLVDKETKL 750
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 374 SEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKI- 550
++ + E+ + K L+ + +L E+ + E+N KL + +D+F L +
Sbjct: 456 ADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQGSETDDFQAKLSVL 515
Query: 551 TAELRHKLAEADDCISDLRSELCKLKEQ 634
AE + E I DL +L +E+
Sbjct: 516 EAEKYQQAKELQITIEDLTKQLTSERER 543
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 28.7 bits (61), Expect = 4.2
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Frame = +2
Query: 287 KSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSE 466
K ++ L EQLK + + ESE+ EE +S IS+ +K ++ I+ S
Sbjct: 991 KGLEMTNDLAAENEQLKESVSSLQNKIDESERKYEE-ISKISEER-IKDEVP--VIDQSA 1046
Query: 467 ALEI---NQKLQDTINTFSQCSDEFC-----DSLKITAELRHKLAEADDCISDLRSELCK 622
+++ NQKL+ +++ + DE S IT +L+ ++ + +S+L +E +
Sbjct: 1047 IIKLETENQKLKALVSSMEEKIDELDRKHDETSPNITEKLKEDVSFDYEIVSNLEAENER 1106
Query: 623 LK 628
LK
Sbjct: 1107 LK 1108
>At5g65500.1 68418.m08240 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 765
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +2
Query: 464 EALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQ 643
E E +KLQ T+++ +C +E + ++ H LAE + +S + + K Q
Sbjct: 296 EESERREKLQATLDSDKECIEEAKNYVEKGKTKLHSLAELQEVLSSKVKTMMEAKSQAEV 355
Query: 644 SLYSELVQSEPSLVAVD 694
L ++Q + ++
Sbjct: 356 ELERVVLQRGEMITEIE 372
>At5g55520.1 68418.m06915 expressed protein weak similarity to
phragmoplast-associated kinesin-related protein 1
[Arabidopsis thaliana] GI:8745333; expression supported
by MPSS
Length = 802
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 308 QLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALEINQK 487
Q+R +++ KNT + L +E E+ E IS DL+ + H+E LEI K
Sbjct: 518 QMRKSIDFTKNTENNSEALEEERERWTEMESEWISLTDDLRMDIDS-HRRHAEDLEIELK 576
>At5g41810.1 68418.m05090 expressed protein
Length = 288
Score = 28.3 bits (60), Expect = 5.6
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = +2
Query: 266 KMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ 445
K M + ++ DE++ E +K +L S QN++E SKN D S
Sbjct: 24 KKMKECVVIQKADEEVTKGQETMK--------ILDGSRQNQDETRQADSKNIDSPSSSS- 74
Query: 446 LFIEHSEALEINQKL--QDTINTFSQCSDEFCDSLKITAELRHKLAEAD--DCISDLRS- 610
+E + LEI+QK Q+ NT + + + + ++HK + DC S L
Sbjct: 75 --LEMKKKLEIDQKFTSQNEENTKKEEEKKKETNNNNLSNMKHKKTSSHVWDCGSTLYDS 132
Query: 611 -ELCKLKEQ 634
EL K Q
Sbjct: 133 FELNSFKRQ 141
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 356 DILLQESEQNEEEM-LSVISKNTDLKKQLSQLFIEHSEALEIN-QKLQDTINTFSQCSDE 529
+++ + ++ +E +M L + + T+ + + ++ EAL QKL+ ++TF + E
Sbjct: 173 ELVKKTNQVSETQMRLKRLEEETEKRAKAEMKIVKEKEALWNKVQKLEAGVDTFRKKRKE 232
Query: 530 FCDSLKITAELRHKLAEADDCISDLRSELCKLKEQ 634
F + +K KL I ++ + KL+ Q
Sbjct: 233 FNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQ 267
>At5g37415.1 68418.m04501 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL105
Length = 242
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 308 QLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEALE--IN 481
QL AL + K+ YD L ++ ++ E ++I+ N DLK L + + S + N
Sbjct: 51 QLNEALRRKKSVT-LYDFLNKKKDKTNLEKKAMITDNDDLKTCLKNVNVLKSPIADHYFN 109
Query: 482 QKLQDTINTFSQCSDEFCDSLKITAELRHKLAEAD 586
++ I + + + ++ +HK + D
Sbjct: 110 DQISQLIQSLEPHVSKVQERIRFVESQKHKETKLD 144
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 28.3 bits (60), Expect = 5.6
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Frame = +2
Query: 284 IKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISK-NTDLKKQLSQLFIEH 460
+ R+ L +E L +EK ++++++ Q +EML K L++Q+SQL
Sbjct: 562 VAEREKVVSLTRQIESLGTVKEK-NLVMEKETQEYKEMLEESEKCRVLLEEQISQL---E 617
Query: 461 SEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQP 640
S++ N+ +++ + + + ++ TA L K D + EL KE
Sbjct: 618 SDS---NENIRELCSKVDIAYAKLAEEVEKTASLVRKSESIDLNEEHRQRELDHYKEMLE 674
Query: 641 QSLYSELVQSE 673
+S ++L+ E
Sbjct: 675 ESTKTQLLLQE 685
>At3g15950.1 68416.m02017 DNA topoisomerase-related similar to DNA
topoisomerase IV subunit A (GI:26454107) [Mycoplasma
penetrans]
Length = 772
Score = 27.9 bits (59), Expect = 7.4
Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Frame = +2
Query: 305 EQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLK-KQLSQLFIEHSEALEIN 481
E EQLK T + L E + ML I ++ + K L QL + +
Sbjct: 160 EAAHAGFEQLK-TDDSAQGLDDEQSAKRQSMLDEIERDFEAATKGLEQLKADDLTGINDE 218
Query: 482 QKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADD 589
+ + EF ++ K ELRH + DD
Sbjct: 219 EHAAKRQKMLEEIEREFEEATKGLEELRHSTSSTDD 254
>At3g12540.1 68416.m01560 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 503
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 389 EEMLSVISKNTDLKKQLSQLFIE-HSEALEINQKLQDTINTFSQCSDEFCDSLKITAELR 565
EE+ +V ++ L+K++ L ++ +SE E N++L+D+I+ + + + ++
Sbjct: 43 EELATVEAEILCLEKRIQDLKLDVYSEKKE-NKELEDSIDEGEE--ERMMNPKRLLQRQN 99
Query: 566 HKLAEADDCISDLRSELCKLKEQQPQSLYSE 658
H +AD+ + +RSE LK++ Y +
Sbjct: 100 HLPCDADNDLIKMRSE--DLKQRSKSQSYGD 128
>At3g02950.1 68416.m00290 expressed protein
Length = 236
Score = 27.9 bits (59), Expect = 7.4
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 338 NTREKYDILLQESEQNEEEMLSVISKNTDLKKQL--SQLFIEHSEALEINQKLQDTINTF 511
N REK + + ++ E +++ ++ DLKKQL S++ +H E E +KL
Sbjct: 101 NLREK-ESFNEVKDETERQIMQAKAEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPR 159
Query: 512 SQCSDEFCDSLKITAELRHKLAEADDCISDLRSELCKLKEQQPQSLYSELVQSEPSLV 685
S+ + K AEL + + A + +LR + L L + + + SLV
Sbjct: 160 SETEKVIYELNKEIAELEAE-STASWRLLELRKKQFALLMHVVDELQNTMEDEQKSLV 216
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/67 (23%), Positives = 36/67 (53%)
Frame = +2
Query: 398 LSVISKNTDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLA 577
+++ S+ ++L+ Q+S L + E + +L+D +++F + E SLK + KL
Sbjct: 35 MAIASRVSNLESQVSGLRQKLLEKDRLVHELEDRVSSFERLYHEADSSLKNVVDENMKLT 94
Query: 578 EADDCIS 598
+ D ++
Sbjct: 95 QERDSLA 101
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 9/129 (6%)
Frame = +2
Query: 314 RIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEAL----EIN 481
R+A QL+ E Y L + E ++ + K L+ +L H EA+ E+
Sbjct: 839 RLADTQLRCMTESYRSLESRAADLEIDVNQLKEKIQKLENELEDEKCNHQEAILRCHELE 898
Query: 482 QKLQDTINTFSQCSDEFCDSLKITAE-----LRHKLAEADDCISDLRSELCKLKEQQPQS 646
+ +Q NT D+ +K E KLAE + I L +L K QP+
Sbjct: 899 EHIQRHRNTSLVAEDDEEADIKSKQERELSAAAEKLAECQETIFVLGKQL-KSFRPQPEQ 957
Query: 647 LYSELVQSE 673
+ S ++E
Sbjct: 958 MRSPQTRNE 966
>At5g47660.1 68418.m05884 DNA-binding protein-related similar to
GTL1 [Arabidopsis thaliana] GI:2664198
Length = 398
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/102 (25%), Positives = 45/102 (44%)
Frame = +2
Query: 266 KMMTRSIKSRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQ 445
KM + I + E RI E+ +E + + Q E ++EM +S + ++
Sbjct: 195 KMHNQLINVMEKMEVERIRREEAWRQQET-ERMTQNEEARKQEMARNLSLISFIRSVTGD 253
Query: 446 LFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHK 571
IE + E Q LQ + QC DE C+S + E++ +
Sbjct: 254 E-IEIPKQCEFPQPLQQILP--EQCKDEKCESAQREREIKFR 292
>At3g20780.1 68416.m02628 topoisomerase 6 subunit B (TOP6B) nearly
identical to topoisomerase 6 subunit B [Arabidopsis
thaliana] GI:12331188
Length = 670
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/68 (23%), Positives = 29/68 (42%)
Frame = +2
Query: 290 SRQVDEQLRIALEQLKNTREKYDILLQESEQNEEEMLSVISKNTDLKKQLSQLFIEHSEA 469
SR + + E LK E++ + + + ML +SK K+ L + EH E
Sbjct: 562 SRYIPDATGAVYEVLKQMTEEHKTKRKRYGEEDIVMLDKVSKQIITKETLKEKLAEHVEQ 621
Query: 470 LEINQKLQ 493
++ L+
Sbjct: 622 VDYEMALE 629
>At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein helicase,
putative
Length = 2172
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 419 TDLKKQLSQLFIEHSEALEINQKLQDTINTFSQCSDEFCDSLKITAELRHKLAEADDCIS 598
TDL + S +I H N+ L+ T+N E C ++ E ++ D+
Sbjct: 1007 TDLGRIASYYYISHGTIAAYNENLKPTMNDI-----ELCRLFSLSEEFKYVTVRQDE--- 1058
Query: 599 DLRSELCKLKEQQP 640
+ EL KL ++ P
Sbjct: 1059 --KMELAKLLDRVP 1070
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,945,773
Number of Sequences: 28952
Number of extensions: 203176
Number of successful extensions: 833
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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