Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g17
         (453 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.8  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.1  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 134 QEKSIGIDTNYSLCSYIASVYL 69
           Q+  + +  NY +C YI S  L
Sbjct: 37  QKTCLNLSINYCICGYIFSAIL 58


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 161 LDFKY*FTRQEKSIGIDTNYSLCSYI 84
           +DF Y     E ++ +D   ++CSY+
Sbjct: 144 IDFLYHVLSNENALDVDLIGNVCSYV 169


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 437 LNCIYYTIIVKLIINMYKQLITILFHNSCS 348
           L CIYY     +I  ++   +  ++H  C+
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLCIYHFFCA 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,050
Number of Sequences: 336
Number of extensions: 1493
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)