Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g16
         (504 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   2.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   2.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.3  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   8.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   8.3  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +3

Query: 54  SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVTRKCISLVSPYFNIDVSQID 218
           +H  E + +V+EEP     R    +  LNH+  +VT     +V+  F   +SQ D
Sbjct: 40  THNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVT----PMVNHDFTQHLSQYD 90


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 54  SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVTRKCISLVSPYFNIDVSQID 218
           +H  E +  V+EEP     R    +  LNH+  +VT     +V+  F   +SQ D
Sbjct: 40  THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT----PMVNHDFTQHLSQYD 90


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 54  SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVTRKCISLVSPYFNIDVSQID 218
           +H  E +  V+EEP     R    +  LNH+  +VT     +V+  F   +SQ D
Sbjct: 40  THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT----PMVNHDFTQHLSQYD 90


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 189 YFNIDVSQIDLRRPLQVLF 245
           +F ID    + R+P+++LF
Sbjct: 301 FFEIDRINAESRKPIRILF 319


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +1

Query: 7   AEKEKN-KFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEK 129
           A+KE   K L  ++    +K   + T   NPLP+ D+ E  K
Sbjct: 151 ADKENFVKLLQEMKQAFGSKYVLSVTVSANPLPSYDIPEINK 192


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/29 (27%), Positives = 10/29 (34%)
 Frame = -2

Query: 362 WRPLAVYWRKARLVVRI*IKSGVAVRRHC 276
           WR     W    L   + I S    + HC
Sbjct: 12  WRAFTASWSPDTLAKNLGINSSFVHKEHC 40


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 171 ISLV--SPYFNIDVSQIDLRRPLQVLFLFLYN 260
           ISLV  + YF  D++Q  +     VLF+FL N
Sbjct: 425 ISLVIGAIYFGQDLNQDGVMNINGVLFVFLTN 456


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +3

Query: 171 ISLV--SPYFNIDVSQIDLRRPLQVLFLFLYN 260
           ISLV  + YF  D++Q  +     VLF+FL N
Sbjct: 425 ISLVIGAIYFGQDLNQDGVMNINGVLFVFLTN 456


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,806
Number of Sequences: 336
Number of extensions: 2316
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)