Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10g14
(630 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16UJ0 Cluster: Wd-repeat protein; n=3; Endopterygota|R... 181 1e-44
UniRef50_UPI00015B4451 Cluster: PREDICTED: similar to wd-repeat ... 174 1e-42
UniRef50_Q9VNG2 Cluster: CG1109-PA, isoform A; n=3; Endopterygot... 172 5e-42
UniRef50_Q9C0J8 Cluster: WD repeat-containing protein 33; n=46; ... 134 2e-30
UniRef50_UPI0000E49487 Cluster: PREDICTED: similar to WDC146; n=... 126 4e-28
UniRef50_Q4T1W3 Cluster: Chromosome 15 SCAF10462, whole genome s... 126 4e-28
UniRef50_Q6NLV4 Cluster: At5g13480; n=10; Magnoliophyta|Rep: At5... 99 1e-19
UniRef50_Q9NAN8 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A7S5J3 Cluster: Predicted protein; n=1; Nematostella ve... 64 3e-09
UniRef50_Q01FR1 Cluster: WD40 repeat-containing protein; n=2; Os... 60 6e-08
UniRef50_Q4PI45 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_A6RCJ1 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_Q9UTN4 Cluster: Polyadenylation factor subunit 2; n=1; ... 50 3e-05
UniRef50_Q6CGP9 Cluster: Polyadenylation factor subunit 2; n=1; ... 48 2e-04
UniRef50_Q7RY68 Cluster: Polyadenylation factor subunit 2; n=13;... 48 2e-04
UniRef50_Q5KKY3 Cluster: Polyadenylation factor subunit 2; n=2; ... 48 2e-04
UniRef50_Q8SW96 Cluster: Similarity to HYPOTHETICAL WD-REPEAT PR... 46 0.001
UniRef50_A2D7P9 Cluster: WD repeat protein, putative; n=1; Trich... 44 0.003
UniRef50_Q5AZX0 Cluster: Polyadenylation factor subunit 2; n=1; ... 44 0.004
UniRef50_UPI0000498C5D Cluster: WD repeat protein; n=2; Entamoeb... 43 0.007
UniRef50_P42841 Cluster: Polyadenylation factor subunit 2; n=6; ... 41 0.021
UniRef50_A6SCB9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.049
UniRef50_P08175 Cluster: Male-specific sperm protein Mst87F; n=4... 39 0.086
UniRef50_Q4Q7R7 Cluster: WD-40 repeat protein; n=5; Trypanosomat... 39 0.11
UniRef50_Q1YFK0 Cluster: Putative uncharacterized protein; n=2; ... 34 3.2
UniRef50_P19532 Cluster: Transcription factor E3; n=32; Euteleos... 33 4.3
UniRef50_Q9HUB0 Cluster: UPF0158 protein PA5073; n=5; Pseudomona... 32 9.9
>UniRef50_Q16UJ0 Cluster: Wd-repeat protein; n=3; Endopterygota|Rep:
Wd-repeat protein - Aedes aegypti (Yellowfever mosquito)
Length = 985
Score = 181 bits (441), Expect = 1e-44
Identities = 86/116 (74%), Positives = 97/116 (83%), Gaps = 3/116 (2%)
Frame = +3
Query: 291 RHNF---RPFNYQMRFPPQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQR 461
+HNF RP+++ F +G L MTQDDFDGKRLRKSVMRKTVDYNA+IIKALE R W R
Sbjct: 37 QHNFYHHRPYHHFNGF--RGGLPMTQDDFDGKRLRKSVMRKTVDYNASIIKALETRTWAR 94
Query: 462 DWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
D+RDR ALQP+ +Y P+LLPPPSY DNP NAVTTRFVKTATNKMRCPIF +AWTPE
Sbjct: 95 DYRDRRALQPENIYIPELLPPPSYMDNPTNAVTTRFVKTATNKMRCPIFTLAWTPE 150
>UniRef50_UPI00015B4451 Cluster: PREDICTED: similar to wd-repeat
protein, partial; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to wd-repeat protein, partial -
Nasonia vitripennis
Length = 470
Score = 174 bits (424), Expect = 1e-42
Identities = 83/118 (70%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
Frame = +3
Query: 279 RNNIRHNFRPFN-YQMRFPPQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVW 455
R + R F+PF Y G QD+FDGKRLRKSVMRKTVDYN+AIIK +E RVW
Sbjct: 325 RESNRGFFKPFRPYHAPKHISGGQESLQDEFDGKRLRKSVMRKTVDYNSAIIKTIENRVW 384
Query: 456 QRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
QRD RDR ALQPD +Y PDLLPPPSY DNP+N+VTTRFVKTATNKMRCPIF +AWTPE
Sbjct: 385 QRDCRDRRALQPDVIYYPDLLPPPSYIDNPMNSVTTRFVKTATNKMRCPIFCMAWTPE 442
>UniRef50_Q9VNG2 Cluster: CG1109-PA, isoform A; n=3;
Endopterygota|Rep: CG1109-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 807
Score = 172 bits (419), Expect = 5e-42
Identities = 80/113 (70%), Positives = 92/113 (81%)
Frame = +3
Query: 291 RHNFRPFNYQMRFPPQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWR 470
+H + F M Q P M+QDDFDGKRLRKSVMRKTVDYNA+IIKALE R++QRD+R
Sbjct: 45 KHGYNQFKPFMPGGFQRPFGMSQDDFDGKRLRKSVMRKTVDYNASIIKALENRLYQRDYR 104
Query: 471 DRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
DR ALQPD++Y P +LPP +Y DNP NAVTTRFVKTATNKMRCPIF +AWTPE
Sbjct: 105 DRLALQPDSIYVPHMLPPSAYLDNPSNAVTTRFVKTATNKMRCPIFTLAWTPE 157
>UniRef50_Q9C0J8 Cluster: WD repeat-containing protein 33; n=46;
Eumetazoa|Rep: WD repeat-containing protein 33 - Homo
sapiens (Human)
Length = 1336
Score = 134 bits (323), Expect = 2e-30
Identities = 58/93 (62%), Positives = 74/93 (79%)
Frame = +3
Query: 351 MTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPS 530
M Q FDGKR+RK+V RKT+DYN ++IK LE R+WQRD RD A+QPDA Y DL+PP
Sbjct: 38 MQQLTFDGKRMRKAVNRKTIDYNPSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIG 97
Query: 531 YPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
+NP+NAVTT+FV+T+TNK++CP+F V WTPE
Sbjct: 98 MLNNPMNAVTTKFVRTSTNKVKCPVFVVRWTPE 130
>UniRef50_UPI0000E49487 Cluster: PREDICTED: similar to WDC146; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
WDC146 - Strongylocentrotus purpuratus
Length = 1154
Score = 126 bits (304), Expect = 4e-28
Identities = 59/116 (50%), Positives = 79/116 (68%)
Frame = +3
Query: 282 NNIRHNFRPFNYQMRFPPQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQR 461
N ++ RP ++ R GP N T FD KR++ ++ R+TVDYN ++IK L+ R+WQR
Sbjct: 46 NYYSNHRRPHHH--RHQEHGPTNATT--FDQKRMKNNLQRRTVDYNTSVIKYLQTRIWQR 101
Query: 462 DWRDRHALQPDAMYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
D++D +QPD Y +L P DNPINAVTTRFV+T+TNK+RCPIF V WTPE
Sbjct: 102 DYKDARMIQPDHSYIGNLSLPHQMLDNPINAVTTRFVRTSTNKVRCPIFCVVWTPE 157
>UniRef50_Q4T1W3 Cluster: Chromosome 15 SCAF10462, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF10462, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1033
Score = 126 bits (304), Expect = 4e-28
Identities = 55/93 (59%), Positives = 72/93 (77%)
Frame = +3
Query: 351 MTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPS 530
M Q FDGKR+RK+V RKT+DYN ++IK L R+WQRD RD A+QPDA DL+PP
Sbjct: 38 MQQLTFDGKRMRKAVNRKTIDYNPSVIKHLGNRLWQRDHRDFRAIQPDAACYNDLVPPLG 97
Query: 531 YPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
+NP+NAVTT+FV+T+TNK++CP+F + WTPE
Sbjct: 98 MLNNPMNAVTTKFVRTSTNKVKCPVFVIRWTPE 130
>UniRef50_Q6NLV4 Cluster: At5g13480; n=10; Magnoliophyta|Rep:
At5g13480 - Arabidopsis thaliana (Mouse-ear cress)
Length = 647
Score = 98.7 bits (235), Expect = 1e-19
Identities = 42/98 (42%), Positives = 56/98 (57%)
Frame = +3
Query: 333 PQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPD 512
P GP + D F KR+RK R+ VDY + +++ ++ R WQRD RDR LQP D
Sbjct: 36 PSGPFDPNVDSFGAKRMRKHTQRRAVDYTSTVVRYIQARTWQRDSRDRTTLQPTPAAAVD 95
Query: 513 LLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTP 626
+LP +Y DNP + +FV + NK RC I V WTP
Sbjct: 96 MLPTVAYSDNPSTSFAAKFVHASLNKNRCSINRVLWTP 133
>UniRef50_Q9NAN8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 809
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +3
Query: 324 RFPPQGPLNMTQDDFDGKRLRKSV--MRKTVDYNAAIIKALECRVWQRDWRDRHALQPDA 497
RF + + D G+RLRK+V +R+ VDY + ++ E R+WQ + R QPD
Sbjct: 42 RFQREHVMPDVMGDGPGRRLRKNVANVRRHVDYVSTVLNHCENRLWQYG-KQRILQQPDI 100
Query: 498 MYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
+Y +P S PD P++ + T+F++TA NK++CP+++V W+PE
Sbjct: 101 LYQQYAVPADSTPDVPVDCILTKFIRTAMNKVKCPVYSVCWSPE 144
>UniRef50_A7S5J3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 150
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +3
Query: 333 PQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPD 512
P+ LN FDGKR+RK+V+RKT+DYN+ ++K LE R W + RH +QPD Y +
Sbjct: 33 PRTFLNRQPMVFDGKRMRKAVIRKTIDYNSCVVKFLENRKWFKHLDSRHGIQPDEAYAAE 92
>UniRef50_Q01FR1 Cluster: WD40 repeat-containing protein; n=2;
Ostreococcus|Rep: WD40 repeat-containing protein -
Ostreococcus tauri
Length = 576
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 384 RKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTP--DLLPPPSYPDNPINAV 557
RK+V R+TVDY A ++ +E R++ +D D A P + D +PP +YP P +
Sbjct: 16 RKAVQRRTVDYTATTVRYVEERLYSKDPWDSPACLPRPLPGALLDFMPPVAYPHLPATSF 75
Query: 558 TTRFVKTATNKMRCPIFAVAWTPE 629
T+FV ++NK+R + VA+ P+
Sbjct: 76 ATKFVHVSSNKIRTSVNKVAFMPD 99
>UniRef50_Q4PI45 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 636
Score = 54.0 bits (124), Expect = 3e-06
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +3
Query: 366 FDGKRLRKSVMRKTVDYNAAIIKA-LECRVWQRDWRD--RHALQPDAMYTPDLLPPPSYP 536
++G+R++K + R+TVDY A+ L R+ D R + P P+ L P Y
Sbjct: 107 YEGRRIKKFMQRRTVDYFGALSHLRLRQRLSTTTRPDGLRGGVYPTPHAIPNFLLPAGY- 165
Query: 537 DNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
DN V + V T+TNK+RCP+ V W P+
Sbjct: 166 DNLSTNVAKQLVHTSTNKIRCPVNVVRWMPD 196
>UniRef50_A6RCJ1 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 619
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 399 RKTVDYNAAIIKALECRVWQRDWRDRHALQ---PDAMYTPDLLPPPSYPDNPINAVTTRF 569
R DY +++++ + RV Q ++ H L+ P A YT D+LPP + D+P + + R
Sbjct: 31 RPVTDYGSSMVQWM--RVRQPRYKGSHRLERERPSASYTVDMLPPLARIDSPADTIPVRH 88
Query: 570 VKTATNKMRCPIFAVAWTPE 629
+ + K + PI V WTPE
Sbjct: 89 LHQSIGKSKKPITVVRWTPE 108
>UniRef50_Q9UTN4 Cluster: Polyadenylation factor subunit 2; n=1;
Schizosaccharomyces pombe|Rep: Polyadenylation factor
subunit 2 - Schizosaccharomyces pombe (Fission yeast)
Length = 509
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = +3
Query: 381 LRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAVT 560
++K + R+TVDY + + K + R + + H +P+ +L PP Y N +++
Sbjct: 10 IQKPMTRRTVDYGSGLSKYIVNRHLRSNRYHIHVPRPNPNQIINLYPPYEYKYNNTSSLC 69
Query: 561 TRFVKTATNKMRCPIFAVAWTPE 629
T+++ T+ NK R I V WTP+
Sbjct: 70 TKYIHTSANKARHVINVVRWTPD 92
>UniRef50_Q6CGP9 Cluster: Polyadenylation factor subunit 2; n=1;
Yarrowia lipolytica|Rep: Polyadenylation factor subunit
2 - Yarrowia lipolytica (Candida lipolytica)
Length = 532
Score = 47.6 bits (108), Expect = 2e-04
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Frame = +3
Query: 303 RPFNYQMRFPPQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHA 482
RP YQ R PQG ++D R+ R+TVD+ +A K W D
Sbjct: 48 RPAGYQPRQQPQG-----EED------RRPAHRRTVDHGSAFGK------WHLDRLSGRT 90
Query: 483 LQPDAM-----YTPDLLPPPSYPD--------NP----INAVTTRFVKTATNKMRCPIFA 611
+QP M Y DLLPP +Y + NP + A +F++ A NK+R P+++
Sbjct: 91 IQPANMRSEQSYIVDLLPPSAYTNINGSLRSTNPHITSVAATPAKFIQVALNKVRHPVYS 150
Query: 612 VAWTPE 629
WTP+
Sbjct: 151 ATWTPD 156
>UniRef50_Q7RY68 Cluster: Polyadenylation factor subunit 2; n=13;
Pezizomycotina|Rep: Polyadenylation factor subunit 2 -
Neurospora crassa
Length = 662
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 411 DYNAAIIKALECRVWQRDWRDRHALQ---PDAMYTPDLLPPPSYPDNPINAVTTRFVKTA 581
DY A+++ + R Q +R +A + P Y D+LPP + NP ++V +R + ++
Sbjct: 36 DYGASVVHYMRHR--QPRYRGSYAGEVERPSPSYIVDMLPPYARVTNPADSVPSRHLHSS 93
Query: 582 TNKMRCPIFAVAWTPE 629
NK++ PI V WTPE
Sbjct: 94 LNKIKHPINVVRWTPE 109
>UniRef50_Q5KKY3 Cluster: Polyadenylation factor subunit 2; n=2;
Filobasidiella neoformans|Rep: Polyadenylation factor
subunit 2 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 712
Score = 47.6 bits (108), Expect = 2e-04
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +3
Query: 378 RLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNPINAV 557
R RK R+TVDY + K + R A+ P+ + LPP + NP ++
Sbjct: 61 RKRKIKPRRTVDYQGGVQKWRMLNKLKGVHEFRPAIHPNPSDIVNFLPPVALRSNPSTSI 120
Query: 558 TTRFVKTATNKMRCPIFAVAWTPE 629
+V T+ NK R P V WTP+
Sbjct: 121 CDYWVHTSINKERSPTRVVRWTPD 144
>UniRef50_Q8SW96 Cluster: Similarity to HYPOTHETICAL WD-REPEAT
PROTEIN YN57_yeast; n=1; Encephalitozoon cuniculi|Rep:
Similarity to HYPOTHETICAL WD-REPEAT PROTEIN YN57_yeast
- Encephalitozoon cuniculi
Length = 408
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +3
Query: 366 FDGKRLRKSVMRKTVDYNAAI-IKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDN 542
+DGKR+R RK VDY + I I+ ++ R+ L P + L P N
Sbjct: 23 YDGKRMRVLQERKVVDYTSGICIQRVKRRLSPLQVNTSFDLSPQILN----LKSPELCYN 78
Query: 543 PINAV-TTRFVKTATNKMRCPIFAVAWTPE 629
I+++ TT+ + NK++CP+ V WTP+
Sbjct: 79 DISSLFTTKIEHVSVNKVKCPVNIVRWTPD 108
>UniRef50_A2D7P9 Cluster: WD repeat protein, putative; n=1;
Trichomonas vaginalis G3|Rep: WD repeat protein,
putative - Trichomonas vaginalis G3
Length = 498
Score = 44.0 bits (99), Expect = 0.003
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 333 PQGPLNMTQDDFDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHAL-QPDAMYTP 509
PQ + ++DG+R RK++ R+ D+ +A E R + + Q ++
Sbjct: 26 PQNNMRQPDQNYDGRRFRKAISRRWCDHR----QAFELYTQARPYNEYDVFPQNVSIGYR 81
Query: 510 DLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
+LLPP Y + I ++ +F+ NK R A+AW P+
Sbjct: 82 NLLPPFCYDTSGI-SICAKFIAHKNNKFRASTKALAWQPD 120
>UniRef50_Q5AZX0 Cluster: Polyadenylation factor subunit 2; n=1;
Emericella nidulans|Rep: Polyadenylation factor subunit
2 - Emericella nidulans (Aspergillus nidulans)
Length = 567
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +3
Query: 399 RKTVDYNAAIIKALECRVWQRDWRDRHALQ---PDAMYTPDLLPPPSYPDNPINAVTTRF 569
R DY +++++ + R + ++ H ++ P A Y D+LPP + +P++++ R
Sbjct: 28 RLVTDYGSSMVQWMRNR--RPKYQGGHRMETERPSASYMVDMLPPLARIHSPVDSIPVRH 85
Query: 570 VKTATNKMRCPIFAVAWTPE 629
+ + K + PI V WTPE
Sbjct: 86 LHQSIGKSKKPITVVRWTPE 105
>UniRef50_UPI0000498C5D Cluster: WD repeat protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: WD repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 460
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3
Query: 501 YTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
YT L PP NP +TT+FV T+ NK + P++ + WTP+
Sbjct: 87 YTRYLQPPILCTSNPGINITTKFVHTSINKNKTPVYCMRWTPD 129
>UniRef50_P42841 Cluster: Polyadenylation factor subunit 2; n=6;
Saccharomycetales|Rep: Polyadenylation factor subunit 2
- Saccharomyces cerevisiae (Baker's yeast)
Length = 465
Score = 41.1 bits (92), Expect = 0.021
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Frame = +3
Query: 381 LRKSV-MRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYP--DNPIN 551
L+K V R++VD ++ I R R ++P+ YT D++PP +Y D IN
Sbjct: 23 LKKYVTQRRSVDVSSPYINLYYNR---RHGLPNLVVEPETSYTIDIMPPNAYRGRDRVIN 79
Query: 552 AVTTRFVKTATNKMRCPIFAVAWTPE 629
+ ++F ++NK++ I A+ WTPE
Sbjct: 80 -LPSKFTHLSSNKVKHVIPAIQWTPE 104
>UniRef50_A6SCB9 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 511
Score = 39.9 bits (89), Expect = 0.049
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 QDDFDGKR--LRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQ-PDAMYTPDLLPPP 527
Q++ G+R +R R DY++ ++ + R + + ++ P Y D+LPP
Sbjct: 29 QEEGGGERDFVRGRGRRPVTDYSSTMVHWMRNRQPRYKGGYQGEMERPSPSYMIDMLPPL 88
Query: 528 SYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
+ N ++V R + ++ NK++ P+ V WTPE
Sbjct: 89 ARIHNAADSVPGRHLHSSLNKIKHPVNVVRWTPE 122
>UniRef50_P08175 Cluster: Male-specific sperm protein Mst87F; n=4;
Diptera|Rep: Male-specific sperm protein Mst87F -
Drosophila melanogaster (Fruit fly)
Length = 56
Score = 39.1 bits (87), Expect = 0.086
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 294 GECCSAPVAGPWVDPSYPCPAGAYPCSGEDVRNPCF 187
G CC P GP P PC G PC G +V PC+
Sbjct: 7 GPCCG-PCCGPCCGPCGPCGGGCGPCYGPNVCGPCY 41
>UniRef50_Q4Q7R7 Cluster: WD-40 repeat protein; n=5;
Trypanosomatidae|Rep: WD-40 repeat protein - Leishmania
major
Length = 476
Score = 38.7 bits (86), Expect = 0.11
Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Frame = +3
Query: 330 PPQGPLNMTQDDFDGKRL---RKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAM 500
P GP + DFD + RK ++ VD+ + I+ + R+ R + + P
Sbjct: 34 PAGGPRRRFRSDFDPEEYAPRRKLHGQRPVDFYSPAIRHVLTRLVPRSTPYSYHVAPHEY 93
Query: 501 YTPDLLPPPSYPDNPINAVTTRFVKTATN------KMRCPIFAVAWTP 626
YT DL+ N A+ T++V T+ + ++R P++A+ W+P
Sbjct: 94 YTKDLVTASVTNYNASTALCTQWVNTSYHPDSKGGRIRTPLYALQWSP 141
>UniRef50_Q1YFK0 Cluster: Putative uncharacterized protein; n=2;
Aurantimonadaceae|Rep: Putative uncharacterized protein
- Aurantimonas sp. SI85-9A1
Length = 184
Score = 33.9 bits (74), Expect = 3.2
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 420 AAIIKALECRVWQRDWRDRHALQPDA------MYTPDLLPPPSYPDN 542
AAI+ L +W R W AL P A M P L PPP PDN
Sbjct: 31 AAILPVLVLAIWSRVWIGWWALAPVAALAVFAMVNPRLFPPPRDPDN 77
>UniRef50_P19532 Cluster: Transcription factor E3; n=32;
Euteleostomi|Rep: Transcription factor E3 - Homo sapiens
(Human)
Length = 743
Score = 33.5 bits (73), Expect = 4.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 264 PWVDPSYPCPAGAYPCSGEDVR 199
PW +PCP G +PC GE R
Sbjct: 661 PWGSQPHPCPCGTHPCPGEGRR 682
>UniRef50_Q9HUB0 Cluster: UPF0158 protein PA5073; n=5; Pseudomonas
aeruginosa|Rep: UPF0158 protein PA5073 - Pseudomonas
aeruginosa
Length = 153
Score = 32.3 bits (70), Expect = 9.9
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 447 RVWQRDWRDRHALQPDAMYTP-DLLPPPSYP 536
R W DW + + +QP A +P LLPPP P
Sbjct: 121 REWALDWLEDNDIQPAARQSPTSLLPPPGKP 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,956,476
Number of Sequences: 1657284
Number of extensions: 13024912
Number of successful extensions: 36309
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 34468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36265
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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