Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g14
         (630 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical pr...    84   7e-17
AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    29   2.7  
U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U41531-6|AAA83160.1|  144|Caenorhabditis elegans Hypothetical pr...    28   4.8  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   4.8  

>Z83120-6|CAB76722.1|  809|Caenorhabditis elegans Hypothetical
           protein R06A4.9 protein.
          Length = 809

 Score = 84.2 bits (199), Expect = 7e-17
 Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
 Frame = +3

Query: 324 RFPPQGPLNMTQDDFDGKRLRKSV--MRKTVDYNAAIIKALECRVWQRDWRDRHALQPDA 497
           RF  +  +     D  G+RLRK+V  +R+ VDY + ++   E R+WQ   + R   QPD 
Sbjct: 42  RFQREHVMPDVMGDGPGRRLRKNVANVRRHVDYVSTVLNHCENRLWQYG-KQRILQQPDI 100

Query: 498 MYTPDLLPPPSYPDNPINAVTTRFVKTATNKMRCPIFAVAWTPE 629
           +Y    +P  S PD P++ + T+F++TA NK++CP+++V W+PE
Sbjct: 101 LYQQYAVPADSTPDVPVDCILTKFIRTAMNKVKCPVYSVCWSPE 144


>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +2

Query: 188 KHGFRTSSPEHGYAPAGHGYDGSTHGPATGAEQH 289
           +HG R+ SP   +   GHG  GS  G   G   H
Sbjct: 241 RHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGH 274


>U70852-4|AAK29816.2|   93|Caenorhabditis elegans Hypothetical
           protein F45E4.5 protein.
          Length = 93

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 224 YAPAGHGYDGSTHGPATG 277
           Y+P GHG+DG   GP  G
Sbjct: 45  YSPPGHGFDGPYGGPMMG 62


>U41531-6|AAA83160.1|  144|Caenorhabditis elegans Hypothetical
           protein T07D1.3 protein.
          Length = 144

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 435 ALECRVWQRDWRDRHALQ--PDAMYT 506
           AL+CR++ R W D H L+  PD  +T
Sbjct: 24  ALKCRLYHRIWEDGHLLRINPDICHT 49


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +2

Query: 215 EHGYAPAGHGYDG--STHGPATGAEQHSP 295
           EH +APA HG+ G   TH    G   H+P
Sbjct: 508 EHHHAPAHHGHHGEHGTHHGHHGEHHHAP 536


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,788,324
Number of Sequences: 27780
Number of extensions: 319063
Number of successful extensions: 1060
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)