Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g07
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B6342 Cluster: PREDICTED: hypothetical protein;...    55   1e-06
UniRef50_A4JSA2 Cluster: Helicase domain protein; n=1; Burkholde...    33   4.9  
UniRef50_Q8KFR6 Cluster: Isoprenyl synthetase; n=10; Chlorobiace...    33   6.4  

>UniRef50_UPI00015B6342 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 224

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
 Frame = +1

Query: 265 VACCCNCAKNYGFTKTDLDRFTDNIEXXXXXXXGRQCFRDFMEEAKMRHGLRTLHFWERV 444
           + C   C    G +  +LDR TD+I+       GR+ FR ++   + +  L  L  +E+V
Sbjct: 72  IGCIGKCTS--GLSLEELDRLTDDIQRTLAHAQGRKIFRKYLSHGRRKTDLACLDLYEQV 129

Query: 445 DKYISSQDT----VHSASHSGCLKRVDSLIDVAKKIE---EFDFAIMERLCIARESENRE 603
            +YI ++ +      S S    L   +  +  A+ ++   E D A++ER   A +S +RE
Sbjct: 130 AEYIDNERSYRLNTKSPSVEPLLADFNLALSAAEDLDDVSEIDLALLERYTQAADSRSRE 189

Query: 604 EIITVLKLFXVEAAKALKREYNAFK 678
            ++ VL+         L++ +  F+
Sbjct: 190 SMLDVLEETRSRMTNHLRQAHKGFR 214


>UniRef50_A4JSA2 Cluster: Helicase domain protein; n=1; Burkholderia
           vietnamiensis G4|Rep: Helicase domain protein -
           Burkholderia vietnamiensis (strain G4 / LMG 22486)
           (Burkholderiacepacia (strain R1808))
          Length = 1155

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
 Frame = +1

Query: 397 AKMRHGLRTLHFWERVD--KYISS--QDTVHSASHSGCLKRVDSLIDVAKKIEEFDFAIM 564
           A  R+G +TL F ERVD  K I    +D +  AS SG    V+    + ++ E  D  +M
Sbjct: 648 ANYRNGRKTLIFCERVDTLKEIEGLLRDGMEKASSSGASGFVERRKTMLERSELVDMRLM 707

Query: 565 ERLCIARESENREEIIT 615
             L + R +   +E  T
Sbjct: 708 RMLWLCRSASGTDEFST 724


>UniRef50_Q8KFR6 Cluster: Isoprenyl synthetase; n=10;
           Chlorobiaceae|Rep: Isoprenyl synthetase - Chlorobium
           tepidum
          Length = 332

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 382 DFMEEAKMRHGLRTLHFWERVDKYISSQDTVHSASHSGCLKRVDSL-IDVAKKIEEFDFA 558
           D M++A +RHG  T+H    V+  I S D + + ++   LK + S   ++     + +  
Sbjct: 90  DIMDQADLRHGRPTVHKQWNVNAAILSGDMMIAYAYELALKAISSRHAEIIHIFNDANIT 149

Query: 559 IMERLCIARESENREEI 609
           I E   +  E E R+++
Sbjct: 150 ICEGQALDMELEQRKDV 166


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,096,641
Number of Sequences: 1657284
Number of extensions: 10631585
Number of successful extensions: 22582
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22567
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)