Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g07
         (680 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300...    28   7.9  

>06_01_0421 -
           3000486-3000595,3000909-3001148,3001659-3001722,
           3001969-3002274,3002365-3002579,3003047-3003341,
           3003487-3003651,3003745-3004341,3004855-3004941,
           3005022-3005342,3006218-3008242
          Length = 1474

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
 Frame = +2

Query: 215 TSDGHRAGQMKLWIHVLW-PAVAIVLKTTVLRRPI*IDLRITLRTY*IITMADSALGIL- 388
           T D +R G+   W H +W  +V + +   +L   + +    +L    I  + ++ L  L 
Sbjct: 406 TVDAYRIGEFPYWFHQIWTTSVQLCIALAILYNAVGLATVSSLVVIIITVLCNAPLAKLQ 465

Query: 389 ---WKKLK*GMDLELYTFGSVSTNISLLKIQCTVRHTRDV 499
                KL    D+ L        ++ +LK+     H + V
Sbjct: 466 HKYQSKLMEAQDVRLKAMSESLVHMKVLKLYAWENHFKKV 505


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,581,881
Number of Sequences: 37544
Number of extensions: 282931
Number of successful extensions: 555
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)