Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g07
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    22   4.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.2  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    22   6.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   6.2  

>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 626 SFSTVIISSLFSDSRAIHSLSMMAKSNSSIFF 531
           SF TV++  L SDS    SLS+    + ++FF
Sbjct: 255 SFLTVLVFYLPSDSGEKVSLSISILLSLTVFF 286


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 240 CPALCPSEVLIVFL 199
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 240 CPALCPSEVLIVFL 199
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 265 VACCCNCAKNYG 300
           ++CCC C  N G
Sbjct: 9   MSCCCWCCDNLG 20


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 240 CPALCPSEVLIVFL 199
           CP  CPS+ ++ F+
Sbjct: 353 CPDCCPSDRMVYFI 366


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -3

Query: 579 DTQPFHDGKVEFLNFFRYID*TIHTFETSRV*RTVHCILRR 457
           D   + DG + F   FRY++  +  ++ + +   +H  LRR
Sbjct: 38  DNSVWADGLLVFYEVFRYLELAMIRWKDTEIGLFLHEELRR 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,260
Number of Sequences: 438
Number of extensions: 3139
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)