Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10g04
         (660 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   2.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   6.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   6.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.0  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 589 NHYIISFVCICYLVSSGLFNVTN 521
           N Y+ S+ C C L  SG+   TN
Sbjct: 1   NQYVDSYTCTCPLGFSGINCQTN 23


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +3

Query: 330 LNQPEIVAAMMTKLGESHRRRQIKEKNFHELK 425
           L Q +IV  M+T LG+ HR+      N  E+K
Sbjct: 34  LFQDQIVDEMVTVLGDLHRKPTY--NNLQEMK 63


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +2

Query: 53  LHVVGWGSGRGEPGLRAHEERDTRSSKIMGPRQRQLFCNRQ*TIEKTIQ 199
           +HV G  +G   PG+    +R   +   +   +++   NR  T  + I+
Sbjct: 217 VHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIE 265


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +2

Query: 53  LHVVGWGSGRGEPGLRAHEERDTRSSKIMGPRQRQLFCNRQ*TIEKTIQ 199
           +HV G  +G   PG+    +R   +   +   +++   NR  T  + I+
Sbjct: 217 VHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIE 265


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 FHELKEVIVKLFIDVLRLDD 470
           +HE KE +++    +LRLD+
Sbjct: 570 WHENKEEMMEFLKSILRLDE 589


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 FHELKEVIVKLFIDVLRLDD 470
           +HE KE +++    +LRLD+
Sbjct: 570 WHENKEEMMEFLKSILRLDE 589


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 FHELKEVIVKLFIDVLRLDD 470
           +HE KE +++    +LRLD+
Sbjct: 570 WHENKEEMMEFLKSILRLDE 589


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 411 FHELKEVIVKLFIDVLRLDD 470
           +HE KE +++    +LRLD+
Sbjct: 570 WHENKEEMMEFLKSILRLDE 589


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 601 LFILNHYIISFVCICYLVSSGLFNVT 524
           +F+   Y  + VCIC++  S +  V+
Sbjct: 912 IFVSTLYTANVVCICHVCYSTIQEVS 937


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +2

Query: 53  LHVVGWGSGRGEPGLRAHEERDTRSSKIMGPRQRQLFCNRQ*TIEKTIQ 199
           +HV G  +G   PG+    +R   +   +   +++   NR  T  + I+
Sbjct: 217 VHVAGASNGTFAPGMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIE 265


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 80  RGEPGLRAHEERDTRSSKIMG 142
           R  P    HEE DTR +   G
Sbjct: 255 RDRPPRHFHEEHDTRRASSRG 275


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
          protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 39 GTWFSYMWWGG 71
          GTW +Y W  G
Sbjct: 31 GTWSTYRWGNG 41


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = -3

Query: 331 RLLTAKFNDVIKLMTCALNCGFCEYSSSGSF 239
           + L  K   +     C  NC   +YS +G++
Sbjct: 782 KYLEIKCKRIYNEKQCCKNCARVDYSMNGTY 812


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,516
Number of Sequences: 336
Number of extensions: 3309
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)