Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10g04
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68115-1|CAA92164.1| 231|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF067609-9|AAP82661.1| 278|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC084154-2|ABO16460.1| 272|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z72503-9|CAA96599.2| 370|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z70285-3|CAE17840.1| 214|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z18264-1|CAA79148.1| 159|Caenorhabditis elegans ORF1 protein. 35 0.045
Z11115-16|CAA77458.2| 159|Caenorhabditis elegans Hypothetical p... 35 0.045
S66164-1|AAB28512.3| 159|Caenorhabditis elegans globin protein. 35 0.045
AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical ... 35 0.045
Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical p... 29 2.2
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr... 29 2.2
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr... 29 2.2
AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81088-6|CAB03123.1| 272|Caenorhabditis elegans Hypothetical pr... 28 6.8
U41028-5|AAA82358.1| 185|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81509-4|CAB04152.2| 236|Caenorhabditis elegans Hypothetical
protein F21A3.6 protein.
Length = 236
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/138 (20%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +3
Query: 81 VVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEY 260
+++ S L+ R+ +QK++AP+ + G ++ RLF+ YP K + R +P+
Sbjct: 78 IIDETSRLSDRQRDVLQKTFAPILQDCVRNGLKIFVRLFSEYPRYKLIWPQFRAIPDSSL 137
Query: 261 SQNPQFKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVK 440
+ + H + L ++++ E + M+++ +H + ++ + + E +++
Sbjct: 138 MNAVELRRHASVYLNGLGKIIDSMRDEEALGKSMSRIAVAHIKWNVQRNHVIHMIEPVLE 197
Query: 441 LFIDV--LRLDDATLSAW 488
+ + +LDD T AW
Sbjct: 198 VVKECNGYQLDDETRQAW 215
>Z68115-1|CAA92164.1| 231|Caenorhabditis elegans Hypothetical
protein F19H6.2 protein.
Length = 231
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 102 LTRREIHAVQKSWAPVN-ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQF 278
LTRRE +++SW + GS++ + PD K F + K+P +P+F
Sbjct: 50 LTRRERILLEQSWRKTRKTGADHIGSKIFFMVLTAQPDIKAIFGL-EKIPTGRLKYDPRF 108
Query: 279 KAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESH 383
+ H + +L+ + NL+ P + LG+ H
Sbjct: 109 RQHALVYTKTLDFVIRNLDYPGKLEVYFENLGKRH 143
>AF067609-9|AAP82661.1| 278|Caenorhabditis elegans Hypothetical
protein C23H5.2 protein.
Length = 278
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/95 (23%), Positives = 43/95 (45%)
Frame = +3
Query: 105 TRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKA 284
++ E +++SW ++ N T + +FN PDT++ F ++ ++ + +
Sbjct: 8 SQEEKDILRRSWKVLDKNLNHTAYNIFEMIFNQSPDTRQLFPFMK---FNTGGRSKEIEF 64
Query: 285 HVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRR 389
H + M L V L+ PE + + LG H R
Sbjct: 65 HALRFMQVLESVVKTLDNPETLNPLCDNLGRVHGR 99
>AC084154-2|ABO16460.1| 272|Caenorhabditis elegans Hypothetical
protein Y22D7AR.5 protein.
Length = 272
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/101 (22%), Positives = 45/101 (44%)
Frame = +3
Query: 93 VSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNP 272
+S LT + + KSW V+ + + + +F PD K F + K +E+ N
Sbjct: 4 LSHLTPIDREILNKSWGIVSKDMQQVAVNIFQMIFEQAPDAKLMFSFMMKDYKEDKKSN- 62
Query: 273 QFKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRRQ 395
+F H + + + + +L P + A+ LG+ H + +
Sbjct: 63 EFIFHAVRFLQVIESTMTHLEDPAQLDAVFLNLGKIHAKHE 103
>Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical
protein C52A11.2 protein.
Length = 266
Score = 37.5 bits (83), Expect = 0.008
Identities = 30/141 (21%), Positives = 65/141 (46%), Gaps = 8/141 (5%)
Frame = +3
Query: 60 WWGGDPDVVNPVS-GLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMV 236
W G + + NP L +++ ++++W ++ G L + + PD K+ F V
Sbjct: 19 WVGNESE--NPFDLALNKKDRTLLRETWQRLDDPKDIVGLIFLDIVNDIEPDLKKVFG-V 75
Query: 237 RKLPEEEYSQNPQFKAHVINLMTSLNLAVNNLNQPEIVAA---MMTKLGESHRRRQIKEK 407
+ P + P+F H++ + + L E + ++ K G SH R+ E+
Sbjct: 76 DRAPRAAMLKMPKFGGHILRFYEFMEQLTSMLGTSENLTGAWQLVRKTGRSHVRQGFLEQ 135
Query: 408 NFHELK----EVIVKLFIDVL 458
N ++++ E+++ +FI+ L
Sbjct: 136 NQNQMEKNYFEIVINVFIERL 156
>Z72503-9|CAA96599.2| 370|Caenorhabditis elegans Hypothetical
protein C26C6.7 protein.
Length = 370
Score = 35.5 bits (78), Expect = 0.034
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +3
Query: 102 LTRREIHAVQKSWAPVNANSFAT--GSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQ 275
LT +IH V+ W V T G+ + RL KE K V +LP + +++
Sbjct: 195 LTCAQIHLVRALWRQVYTTKGPTVIGASIYHRLCFKNVMVKEQMKQV-ELPPKFQNRDNF 253
Query: 276 FKAHVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHR---RRQIKEKNFHELKEVIV 437
KAH + ++ V NL+ + V + ++G H R ++ K ++ + E I+
Sbjct: 254 IKAHCKAVAELIDQVVENLDHLDNVTGELMRIGRVHAKVLRGELTGKLWNTVAETII 310
>Z70285-3|CAE17840.1| 214|Caenorhabditis elegans Hypothetical
protein F56C4.3 protein.
Length = 214
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/101 (18%), Positives = 43/101 (42%)
Frame = +3
Query: 105 TRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKA 284
T+ E + ++ SW V ++ +FN P+ + F ++ + + +N +F
Sbjct: 12 TQEEKNDLEHSWNLVEGKKNHIACDIYEMIFNQCPEARRLFPKLKFVGSKPDRKNNEFAF 71
Query: 285 HVINLMTSLNLAVNNLNQPEIVAAMMTKLGESHRRRQIKEK 407
+ M + AV L+ + ++ LG H + ++ K
Sbjct: 72 QAMRFMQVIEGAVKALDHLTSLDVILDNLGRRHGKLEVNGK 112
>Z18264-1|CAA79148.1| 159|Caenorhabditis elegans ORF1 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +3
Query: 153 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 332
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 333 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 488
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>Z11115-16|CAA77458.2| 159|Caenorhabditis elegans Hypothetical
protein ZK637.13 protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +3
Query: 153 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 332
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 333 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 488
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>S66164-1|AAB28512.3| 159|Caenorhabditis elegans globin protein.
Length = 159
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/112 (19%), Positives = 43/112 (38%)
Frame = +3
Query: 153 ANSFATGSELLRRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHVINLMTSLNLAVNNL 332
A + G+ R F +PD + YFK K ++ ++ +F ++ + +L N
Sbjct: 25 AQNIENGNAFYRYFFTNFPDLRVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVY 84
Query: 333 NQPEIVAAMMTKLGESHRRRQIKEKNFHELKEVIVKLFIDVLRLDDATLSAW 488
E+ + + HR ++ + V V L+D +AW
Sbjct: 85 TNEEVFKGYVRETINRHRIYKMDPALWMAFFTVFTGYLESVGCLNDQQKAAW 136
>AC006807-6|AAK84620.2| 230|Caenorhabditis elegans Hypothetical
protein Y58A7A.6 protein.
Length = 230
Score = 35.1 bits (77), Expect = 0.045
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +3
Query: 93 VSGLTRREIHAVQKSWAPVNANSFATGS-ELLRRLFNTYPDTKEYFKMVRKLPEEEYSQN 269
+SGL+R + ++ W + S ++ + +T D F++ P N
Sbjct: 89 ISGLSRDDKRIIETCWFKCSQKQLRKCSCDMFWDILHTDEDILRLFRLDHVAPNR-LKDN 147
Query: 270 PQFKAHVINLMTSLNLAVNNL 332
FK+H NL LNL V NL
Sbjct: 148 DYFKSHASNLALVLNLVVTNL 168
>Z78542-10|CAB01751.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -3
Query: 655 GIAFEWNLTSNSIHTNSTLFILNHYIISFVCI---CYLVSSGLFNVTNICL 512
GI FE+ T+N I + T L Y+I I Y S+ + N+ CL
Sbjct: 338 GILFEYEFTANVIEVHKTSITLISYLIRICSILGGVYATSTIVNNILQFCL 388
>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
protein T05C1.4b protein.
Length = 1163
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 72 DPDVVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPE 251
D DV P S R HAV V N+ A ++L R++ PD + V P+
Sbjct: 763 DTDVHVPDSPKMARLFHAVTSPGIVVPPNARARMADLARQIIEALPDRIKRNSEVSMCPD 822
Query: 252 EE 257
EE
Sbjct: 823 EE 824
>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
protein T05C1.4a protein.
Length = 1185
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +3
Query: 72 DPDVVNPVSGLTRREIHAVQKSWAPVNANSFATGSELLRRLFNTYPDTKEYFKMVRKLPE 251
D DV P S R HAV V N+ A ++L R++ PD + V P+
Sbjct: 763 DTDVHVPDSPKMARLFHAVTSPGIVVPPNARARMADLARQIIEALPDRIKRNSEVSMCPD 822
Query: 252 EE 257
EE
Sbjct: 823 EE 824
>AL031620-6|CAA20929.2| 428|Caenorhabditis elegans Hypothetical
protein C18B12.6 protein.
Length = 428
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -3
Query: 655 GIAFEWNLTSNSIHTNSTLFILNHYIISFVCI---CYLVSSGLFNVTNICL 512
GI FE+ T+N I + T L Y+I I Y S+ + N+ CL
Sbjct: 338 GILFEYEFTANVIEVHKTSITLISYLIRICSILGGVYATSTIVNNILQFCL 388
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 186 RRLFNTYPDTKEYFKMVRKLPEEEYSQNPQFKAHV 290
RRL +T + +Y K ++KL EE+ +P+ K +V
Sbjct: 257 RRLLDTMKFSDDYKKFLKKLSYEEFFIDPKAKGNV 291
>Z81088-6|CAB03123.1| 272|Caenorhabditis elegans Hypothetical
protein F53F1.6 protein.
Length = 272
Score = 27.9 bits (59), Expect = 6.8
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 255 EYSQNPQFKAHVINLMTSLNL----AVNNLNQPEIVAAM--MTKLGESHRRRQIKEKNFH 416
EY++ QF +HV+N+ L+ N++ + + + T G+ QIKE +
Sbjct: 51 EYAETEQFYSHVVNVKNILDSLFEEVENDIKRLDAIFCFNEYTVYGQED-IEQIKENIKN 109
Query: 417 ELKEVIV---KLFIDVLRLDDATLSAWGKTVEFWYKHIFVTL 533
E K + KL+ D+ + S + KT W +H VTL
Sbjct: 110 EYKTSVAHFSKLWEDIKAMSVLLRSCFNKT---WDRHSEVTL 148
>U41028-5|AAA82358.1| 185|Caenorhabditis elegans Hypothetical
protein C25G6.1 protein.
Length = 185
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 577 ISFVCICYLVSSGLFNVTNICLYQNSTVFPHADSVASSKR 458
++F C+ + N TN+ Q T FP+ D A KR
Sbjct: 86 VTFKSDCFYQTQIQVNPTNLSYIQGKTCFPYQDGSAPVKR 125
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 441 LFIDVLRLDDATLSAWGKTVEFWYKH 518
L D++R DD ++ WG+TV + H
Sbjct: 1321 LIQDMIRADDHMITCWGRTVAIFVFH 1346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,269,574
Number of Sequences: 27780
Number of extensions: 321852
Number of successful extensions: 1067
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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