Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f19
         (279 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1RPV1 Cluster: Zinc finger protein; n=1; Ciona intesti...    32   2.8  
UniRef50_Q98RS9 Cluster: Putative uncharacterized protein orf665...    31   3.8  
UniRef50_A6RW24 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  

>UniRef50_Q1RPV1 Cluster: Zinc finger protein; n=1; Ciona
           intestinalis|Rep: Zinc finger protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 291

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
 Frame = -2

Query: 272 FNEQNFLMINKRHIRCILC-RTYP-FSTIKLH-NVHKK 168
           FN   FL + ++  +C++C +T+   S +KLH NVHK+
Sbjct: 58  FNSHKFLHVKEKPFKCLICEKTFSRMSYLKLHENVHKE 95


>UniRef50_Q98RS9 Cluster: Putative uncharacterized protein orf665;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf665 - Guillardia theta (Cryptomonas phi)
          Length = 665

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -2

Query: 275 FFNEQNFLMINKRHIRCILCRTYPFSTI-KLHNVHKKSNYNNNKTTIRAMF*L*LAFDRI 99
           F    +F + NK+ +  I C    F  I K+ N  K   YNN K  +   F   L F  I
Sbjct: 160 FGKSNDFKIHNKKFLEKINCAEKLFINILKIRNFSKIFEYNNVKNNLNNKFVKKLFFLLI 219

Query: 98  FQAHVEWPDV 69
             +  EW D+
Sbjct: 220 LNSDREWVDL 229


>UniRef50_A6RW24 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 925

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 239 RHIRCILCRTYPFSTIKLHNVHKKSN 162
           R +RC  C TY F T++ HN H++ N
Sbjct: 398 RELRCPTC-TYKFDTVRGHNFHRQKN 422


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,262,914
Number of Sequences: 1657284
Number of extensions: 3408413
Number of successful extensions: 8592
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8588
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)