Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f19
         (279 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containi...    28   4.6  
AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containi...    28   4.6  
AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein.                28   4.6  
AB020681-1|BAA74897.1|  601|Homo sapiens KIAA0874 protein protein.     28   4.6  

>AY533564-1|AAS45545.2| 2039|Homo sapiens ankyrin repeat-containing
            cofactor-2 protein.
          Length = 2039

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -2

Query: 269  NEQNFLMINKRHIRCILCRTYPFST------IKLHNVHKKSNYNNNKTTIRAMF 126
            NEQ  L ++ R  R +  +T PFS        +++NV   S  +++KT++R  F
Sbjct: 1905 NEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF 1958


>AY373757-1|AAR25662.1| 2062|Homo sapiens ankyrin repeat-containing
            protein protein.
          Length = 2062

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -2

Query: 269  NEQNFLMINKRHIRCILCRTYPFST------IKLHNVHKKSNYNNNKTTIRAMF 126
            NEQ  L ++ R  R +  +T PFS        +++NV   S  +++KT++R  F
Sbjct: 1928 NEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF 1981


>AF317425-1|AAG38609.1| 2062|Homo sapiens GAC-1 protein.
          Length = 2062

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -2

Query: 269  NEQNFLMINKRHIRCILCRTYPFST------IKLHNVHKKSNYNNNKTTIRAMF 126
            NEQ  L ++ R  R +  +T PFS        +++NV   S  +++KT++R  F
Sbjct: 1928 NEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF 1981


>AB020681-1|BAA74897.1|  601|Homo sapiens KIAA0874 protein protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
 Frame = -2

Query: 269 NEQNFLMINKRHIRCILCRTYPFST------IKLHNVHKKSNYNNNKTTIRAMF 126
           NEQ  L ++ R  R +  +T PFS        +++NV   S  +++KT++R  F
Sbjct: 467 NEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF 520


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,187,059
Number of Sequences: 237096
Number of extensions: 443369
Number of successful extensions: 633
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)