Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10f18
(746 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1827|AAF50151.1| 196|Drosophila melanogaster CG14151-P... 33 0.31
AF220179-1|AAG28590.1| 195|Drosophila melanogaster fruitless ty... 33 0.55
AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-P... 33 0.55
AY113326-1|AAM29331.1| 133|Drosophila melanogaster AT28918p pro... 30 3.9
AE014134-2594|AAN10899.1| 133|Drosophila melanogaster CG31733-P... 30 3.9
AE014134-2593|AAN10898.1| 208|Drosophila melanogaster CG31733-P... 30 3.9
AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p pro... 29 5.1
AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA... 29 5.1
BT029572-1|ABL75631.1| 211|Drosophila melanogaster IP16890p pro... 29 6.7
>AE014296-1827|AAF50151.1| 196|Drosophila melanogaster CG14151-PA
protein.
Length = 196
Score = 33.5 bits (73), Expect = 0.31
Identities = 25/118 (21%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Frame = +1
Query: 385 LLMTVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVY---LTITVRSP 555
L+ + W+++ I + G++RR+ G ++F+++F ++L L+Y L I+V
Sbjct: 44 LVALIFTIFWMVIIIVLMAGIYRRKLGLVRFWLVFTCLGILLDGFILLYGLTLAISVNWE 103
Query: 556 ALMLHRLDIVVXSF-FIMVYNTYARQLEN-EKQQIQARPENQIRDVSFIDPRTMDDKK 723
+ + L V + VY Y L+ + + P+ + R+ S D + ++++
Sbjct: 104 GVKITVLPFVGLAVEMTFVYIIYLLYLDMIDYSATETPPDEKYRERSGCDVKYAEEEE 161
>AF220179-1|AAG28590.1| 195|Drosophila melanogaster fruitless
type-C protein.
Length = 195
Score = 32.7 bits (71), Expect = 0.55
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -2
Query: 361 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSGNQG*SNKSSVEGSDS 206
G S R +GR R + Q +W E +CRH WSG S VEG+ +
Sbjct: 84 GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSGELADIRTSFVEGNSN 138
>AE014297-2540|AAN13777.1| 665|Drosophila melanogaster CG14307-PD,
isoform D protein.
Length = 665
Score = 32.7 bits (71), Expect = 0.55
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = -2
Query: 361 GASPRTAGRVRYWYQLQCKW---SE*TTARYCRHW*TWSGNQG*SNKSSVEGSDS 206
G S R +GR R + Q +W E +CRH WSG S VEG+ +
Sbjct: 554 GGSSRKSGRFRANWLYQFEWLQYDERANTMFCRHCRKWSGELADIRTSFVEGNSN 608
>AY113326-1|AAM29331.1| 133|Drosophila melanogaster AT28918p
protein.
Length = 133
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 KKYCHCLPLRICCFILGYLTMFTNVCNT-GLLFTLTTY 309
KK+C+C LRI F + Y + +V +T ++T + Y
Sbjct: 5 KKFCYCFSLRIGAFSIAYAGLTMDVLDTVATIYTKSQY 42
>AE014134-2594|AAN10899.1| 133|Drosophila melanogaster CG31733-PA,
isoform A protein.
Length = 133
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 KKYCHCLPLRICCFILGYLTMFTNVCNT-GLLFTLTTY 309
KK+C+C LRI F + Y + +V +T ++T + Y
Sbjct: 5 KKFCYCFSLRIGAFSIAYAGLTMDVLDTVATIYTKSQY 42
>AE014134-2593|AAN10898.1| 208|Drosophila melanogaster CG31733-PB,
isoform B protein.
Length = 208
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 KKYCHCLPLRICCFILGYLTMFTNVCNT-GLLFTLTTY 309
KK+C+C LRI F + Y + +V +T ++T + Y
Sbjct: 5 KKFCYCFSLRIGAFSIAYAGLTMDVLDTVATIYTKSQY 42
>AY118624-1|AAM49993.1| 648|Drosophila melanogaster RE22492p
protein.
Length = 648
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 449 CSPTTQAMLTSNHAAFITVIRSTTSIPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 282
C P + A TS H F+ +I S G + + R G+ L + P+ V + P
Sbjct: 30 CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85
>AE014297-435|AAF51890.3| 648|Drosophila melanogaster CG15598-PA
protein.
Length = 648
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 449 CSPTTQAMLTSNHAAFITVIRSTTSIPLMRGVSEDCRAGKVLVSAPM*VVRVNNSP 282
C P + A TS H F+ +I S G + + R G+ L + P+ V + P
Sbjct: 30 CHPVSMARSTSGHLIFLLLICLINSAAKADGTARNGRLGRHLSTTPLSHPTVESQP 85
>BT029572-1|ABL75631.1| 211|Drosophila melanogaster IP16890p
protein.
Length = 211
Score = 29.1 bits (62), Expect = 6.7
Identities = 8/51 (15%), Positives = 27/51 (52%)
Frame = +1
Query: 379 VVLLMTVINAAWLLVNIACVVGLHRRRPGNIKFYVLFAACRLVLVFAGLVY 531
+ + + W+ + + +VG+H R P ++ +++F+ +++ ++Y
Sbjct: 46 LTIFAAIFGLFWITMIVMLLVGIHGRHPSCVRAWIIFSCVGIMVEMCLVLY 96
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,437,380
Number of Sequences: 53049
Number of extensions: 723222
Number of successful extensions: 1590
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -