Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f18
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23172-8|AAM22067.1|   53|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin pro...    29   3.5  
AF098500-1|AAC67400.2|  311|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AC006642-3|AAF39832.2|  410|Caenorhabditis elegans Acyltransfera...    28   6.1  
AC006642-2|AAF39831.1|  617|Caenorhabditis elegans Acyltransfera...    28   6.1  

>U23172-8|AAM22067.1|   53|Caenorhabditis elegans Hypothetical
           protein F25B5.3e protein.
          Length = 53

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = -2

Query: 172 FVSSFLYLSRQSIVPWR*VL*ETCCRESVWSFCQN 68
           FVS   + SRQSI+  R VL E+C  ++V S C++
Sbjct: 14  FVSGRRFESRQSILQLRSVLRESCWLQTVVSVCEH 48


>Z69790-3|CAD56579.1| 1234|Caenorhabditis elegans Hypothetical protein
            F33C8.1b protein.
          Length = 1234

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYLTITVRSPA 558
            +  VV   +  P N + F+V+FAAC +V LV AGL+++ I VR  A
Sbjct: 1124 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM-IKVRIEA 1168


>Z69790-2|CAA93653.2| 1271|Caenorhabditis elegans Hypothetical protein
            F33C8.1a protein.
          Length = 1271

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYLTITVRSPA 558
            +  VV   +  P N + F+V+FAAC +V LV AGL+++ I VR  A
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM-IKVRIEA 1205


>AF339882-1|AAK14396.1| 1329|Caenorhabditis elegans attractin protein.
          Length = 1329

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +1

Query: 427  IACVVGLHRRRPGN-IKFYVLFAACRLV-LVFAGLVYLTITVRSPA 558
            +  VV   +  P N + F+V+FAAC +V LV AGL+++ I VR  A
Sbjct: 1161 VQIVVSFAQSPPINWVLFFVIFAACFIVLLVVAGLLWM-IKVRIEA 1205


>AF098500-1|AAC67400.2|  311|Caenorhabditis elegans Hypothetical
           protein F43B10.1 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 94  PYNTFPKEPNAREQWIDVT-GRGNWKQRLSSTSSLGKKYCHCLPL 225
           P   +    NA   WI +T  R  +KQRL  T    +++CH L +
Sbjct: 74  PLTAYELNTNAIFFWIHITMARRGFKQRLKVTRESIERFCHDLKI 118


>Z93383-7|CAB07621.1|  285|Caenorhabditis elegans Hypothetical
           protein F54B8.8 protein.
          Length = 285

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 502 LVLVFAGLVYLTITVRSPALMLHRLDIVVXSFFIMVYNTYARQLEN 639
           L+ +    + L  TVRS    L  +D V+ SFF + Y  +  +L N
Sbjct: 84  LIFLLIWPILLVGTVRSTLTFLVTMDRVIGSFFPIFYYNHRHKLSN 129


>AC006642-3|AAF39832.2|  410|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform b protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 160 NWKQRLSSTSSLGK--KYCHCLPLRICCFILGYLTMFTNVCNTGLL 291
           NWK  LS+   LG   +YC  LPLR   F +G + + ++    GL+
Sbjct: 36  NWK--LSALWILGFMFRYCVMLPLRFTVFCIGLVFLISSTALIGLV 79


>AC006642-2|AAF39831.1|  617|Caenorhabditis elegans
           Acyltransferase-like protein 4,isoform a protein.
          Length = 617

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 160 NWKQRLSSTSSLGK--KYCHCLPLRICCFILGYLTMFTNVCNTGLL 291
           NWK  LS+   LG   +YC  LPLR   F +G + + ++    GL+
Sbjct: 246 NWK--LSALWILGFMFRYCVMLPLRFTVFCIGLVFLISSTALIGLV 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,568,227
Number of Sequences: 27780
Number of extensions: 364088
Number of successful extensions: 934
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)