Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10f16
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06360.1 68418.m00712 ribosomal protein S8e family protein co... 274 3e-74
At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR... 31 0.59
At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recogniti... 30 1.4
At3g59140.1 68416.m06593 ABC transporter family protein putative... 30 1.4
At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and gb... 30 1.4
At4g35870.1 68417.m05094 expressed protein 29 3.1
At3g28770.1 68416.m03591 expressed protein 29 3.1
At2g42610.2 68415.m05274 expressed protein contains Pfam profile... 29 3.1
At2g42610.1 68415.m05273 expressed protein contains Pfam profile... 29 3.1
At1g65710.1 68414.m07458 expressed protein ; expression supporte... 29 3.1
At2g41460.1 68415.m05122 apurinic endonuclease-redox protein / D... 29 4.1
At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 fac... 29 4.1
At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 fac... 29 4.1
At5g25410.1 68418.m03014 expressed protein contains Pfam profil... 28 5.5
At2g22795.1 68415.m02704 expressed protein 28 5.5
At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR... 28 7.2
At2g40950.1 68415.m05056 bZIP transcription factor family protei... 28 7.2
At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family pr... 27 9.6
At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family pr... 27 9.6
At3g09850.1 68416.m01175 D111/G-patch domain-containing protein ... 27 9.6
At1g76220.1 68414.m08851 hypothetical protein contains Pfam prof... 27 9.6
>At5g06360.1 68418.m00712 ribosomal protein S8e family protein
contains Pfam profile PF01201: Ribosomal protein S8e
Length = 260
Score = 274 bits (673), Expect = 3e-74
Identities = 133/225 (59%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
Frame = +2
Query: 53 MPQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQ 232
MPQ +YI+ H+K G RLD+ GIK K+ K+ EK
Sbjct: 1 MPQGDYIDLHRKRNGYRLDHFERKRKKEAREVHKHSTMAQKSLGIKGKMIAKKNYAEKAL 60
Query: 233 MKKKIKAHEEKNVKQNT-EKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVP 409
MKK +K HEE + ++ E V EGA+P YLLDR+ +RAKVLSN IKQKRKEKAGKW+VP
Sbjct: 61 MKKTLKMHEESSSRRKADENVQEGAVPAYLLDREDTTRAKVLSNTIKQKRKEKAGKWEVP 120
Query: 410 IPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 589
+PKVR A+ E+F+V++SGK K K WKRMVTK TFVG FTRKPPK+ERFIRP LRF K
Sbjct: 121 LPKVRPVAEDEMFRVIRSGKRKTKQWKRMVTKATFVGPAFTRKPPKYERFIRPSGLRFTK 180
Query: 590 AHVTHPELKATFCLPIIGVKKNPSSQMYTSLGVITKGTVIEVNIS 724
AHVTHPELK TFCL IIG+KKNP+ MYTSLGV+T+GT+IEVN+S
Sbjct: 181 AHVTHPELKCTFCLEIIGIKKNPNGPMYTSLGVMTRGTIIEVNVS 225
>At4g11170.1 68417.m01809 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1095
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +2
Query: 347 KVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSG 466
+VL + ++ K KE+ W+ +P ++++ D EV KVLK G
Sbjct: 386 RVLGSFMRGKGKEE---WEFSLPTLKSRLDGEVEKVLKVG 422
>At5g22640.1 68418.m02645 MORN (Membrane Occupation and Recognition
Nexus) repeat-containing protein contains Pfam profile
PF02493: MORN repeat
Length = 871
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 230 QMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKE 385
++KKK + E+K TE+ + +PVY ++ V ++ K+ N ++K K+
Sbjct: 632 ELKKKEQEEEKKTEMGLTEEDEDVLVPVYKEEKVVTAKEKIQENKQEEKYKD 683
>At3g59140.1 68416.m06593 ABC transporter family protein putative
multi resistance protein mrp - Arabidopsis thaliana,
EMBL:ATMRPPROT
Length = 1453
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +2
Query: 245 IKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVL--SNMIKQKRKEK 388
+ AH E + V PV ++R + S++KVL S +IKQ+ +EK
Sbjct: 823 VNAHRETAGSERVVAVENPTKPVKEINRVISSQSKVLKPSRLIKQEEREK 872
>At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and
gb|AA595092 come from this gene
Length = 234
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Frame = +2
Query: 203 NKERRNEKIQMKKKIKAHEEKNVK---QNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQ 373
+++ R ++ Q ++ + + K VK + EK AE A R + K L +K+
Sbjct: 27 DRQTREKEEQYWREAEGPKSKAVKKREEEAEKKAETAAKKLEAKRLAEQEEKELEKALKK 86
Query: 374 KRKEKAGKWDVPIPKV------RAQADAEVFKVLKSGKSKRK 481
K KA + VP+PKV R + + +V K+ SK+K
Sbjct: 87 PDK-KANRVTVPVPKVTEAELIRRREEDQVALAKKAEDSKKK 127
>At4g35870.1 68417.m05094 expressed protein
Length = 817
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/101 (21%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 218 NEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGK 397
+EK++ ++++A E + E A+GA +++ +DV + K + + + +R + GK
Sbjct: 312 DEKLRKLQELRADLESQLAAYKEGRAQGAGVAFVMFKDVYTANKAVQD-FRNERSRRTGK 370
Query: 398 WDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRM-VTKVTFV 517
+ + ++R Q + +KV ++ + W + +TKV +
Sbjct: 371 F-FSVTELRLQRNQ--WKVDRAPLATDIYWNHLGLTKVALI 408
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = +2
Query: 188 KAKIFNKERRNEKIQMKKK---IKAHEEKNVKQNTE 286
K ++ KE+++ K Q KKK +K EEK +K+N E
Sbjct: 1175 KNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEE 1210
>At2g42610.2 68415.m05274 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 177
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 251 AHEEKNVKQNTEKVAEGALPVYLLD-RDVQSRAKVLSNMIKQKRK 382
A+EE T A GA+ VYL + R+ Q++A+ + K+K+K
Sbjct: 111 AYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKK 155
>At2g42610.1 68415.m05273 expressed protein contains Pfam profile
PF04852: Protein of unknown function (DUF640)
Length = 177
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 251 AHEEKNVKQNTEKVAEGALPVYLLD-RDVQSRAKVLSNMIKQKRK 382
A+EE T A GA+ VYL + R+ Q++A+ + K+K+K
Sbjct: 111 AYEENGGPPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKK 155
>At1g65710.1 68414.m07458 expressed protein ; expression supported
by MPSS
Length = 455
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +2
Query: 188 KAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPV 313
K++ N+E E++ + K ++HEE++ K ++K + + PV
Sbjct: 40 KSEKLNQEEEEEEVVVIKHTRSHEERSKKTESDKDSPVSSPV 81
>At2g41460.1 68415.m05122 apurinic endonuclease-redox protein /
DNA-(apurinic or apyrimidinic site) lyase identical to
apurinic endonuclease-redox protein SP: P45951 from
[Arabidopsis thaliana]
Length = 536
Score = 28.7 bits (61), Expect = 4.1
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +2
Query: 185 IKAKIFNKERRNEKIQMKKKIK--AHEEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLS 358
IK KI N+E E + H EK VKQ+TEK + + + ++ +S +
Sbjct: 152 IKRKISNREEPTEDECTNSEAYDIEHGEKRVKQSTEKNLKAKVSAKAIAKEQKSLMRTGK 211
Query: 359 NMIKQKRKEKAGKWDVPIPK----VRAQADAEVFKVLKSGKSKRKAWK 490
I Q ++E + + K + + + +E + VL + K +K WK
Sbjct: 212 QQI-QSKEETSSTISSELLKTEEIISSPSQSEPWTVL-AHKKPQKDWK 257
>At1g76890.2 68414.m08948 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 575
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 425 AQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 589
A + E +KS + KRK WK + TK+T E ++ +RF+ + R K+
Sbjct: 241 ASDEEEDHHQVKSSRKKRKYWKGLFTKLT--KELMEKQEKMQKRFLETLEYREKE 293
>At1g76890.1 68414.m08947 trihelix DNA-binding protein / GT-2 factor
(GT2) identical to GT2 factor [Arabidopsis thaliana]
GI:416490, GI:2664202 (DNA binding factor GT-2 from
Arabidopsis)
Length = 498
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 425 AQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPKFERFIRPMALRFKK 589
A + E +KS + KRK WK + TK+T E ++ +RF+ + R K+
Sbjct: 164 ASDEEEDHHQVKSSRKKRKYWKGLFTKLT--KELMEKQEKMQKRFLETLEYREKE 216
>At5g25410.1 68418.m03014 expressed protein contains Pfam profile
PF03080: Arabidopsis proteins of unknown function
Length = 369
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 215 RNEKIQMKKKIKAHEEKNVKQNTE 286
+N KIQMK + HE +N NT+
Sbjct: 60 KNHKIQMKPSVSRHELRNQTDNTK 83
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 206 KERRNEKIQMKKKIKAH-EEKNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMIKQKRK 382
+E +++ + K+K+++ +EKN + TEK+ L D + S+ K + K
Sbjct: 464 EETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKEDETKEKEESSSQEKTEEK 523
Query: 383 EKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRKPPK 547
E K + D E K+ K S ++ K T+ E+ +++ K
Sbjct: 524 ETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETK 578
>At5g41550.1 68418.m05049 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1085
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 377 RKEKAGKWDVPIPKVRAQADAEVFKVLKSG 466
R E +W++ +P++ A D ++ +LK G
Sbjct: 396 RGESKHEWELQLPRIEASLDGKIESILKVG 425
>At2g40950.1 68415.m05056 bZIP transcription factor family protein
similar to AtbZIP transcription factor GI:17065880 from
[Arabidopsis thaliana]; contains Pfam profile: bZIP
transcription factor PF00170
Length = 721
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 404 VPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVG 520
+PIP+++ Q K KS K +A + V ++F+G
Sbjct: 334 IPIPRLKPQNTLGTSKAKKSESKKSEAKTKKVASISFLG 372
>At4g36540.2 68417.m05189 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 302
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 209 ERRNEKIQMKKKIKAHEE-------KNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 367
E + EK + KKKIKA +E K+ NTE +E P Y+ R + A ++
Sbjct: 97 EGKTEKRE-KKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLA 155
Query: 368 KQKRKEKAGK 397
++ R+EK K
Sbjct: 156 ERARREKISK 165
>At4g36540.1 68417.m05188 basic helix-loop-helix (bHLH) family
protein contains Pfam domain, PF00010: Helix-loop-helix
DNA-binding domain
Length = 304
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 209 ERRNEKIQMKKKIKAHEE-------KNVKQNTEKVAEGALPVYLLDRDVQSRAKVLSNMI 367
E + EK + KKKIKA +E K+ NTE +E P Y+ R + A ++
Sbjct: 97 EGKTEKRE-KKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLA 155
Query: 368 KQKRKEKAGK 397
++ R+EK K
Sbjct: 156 ERARREKISK 165
>At3g09850.1 68416.m01175 D111/G-patch domain-containing protein
contains Pfam profile PF01585: G-patch domain
Length = 781
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 182 GIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPV-YLLDRDVQSRAKVLS 358
G+K K + +R+ K KK+ E + K N +K + PV ++ + S V
Sbjct: 546 GVKGKSGSLDRKKAKDSAKKRPTREERERNKSNGKKSSYADQPVSFVSSGIIDSEIAVAK 605
Query: 359 NMIKQKRKEKA 391
+++ KE A
Sbjct: 606 TSVEKVAKEVA 616
>At1g76220.1 68414.m08851 hypothetical protein contains Pfam profile
PF03087: Arabidopsis protein of unknown function
Length = 256
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 179 RGIKAKIFNKERRNEKIQMKKKIKAHEEKNVKQNTEKVAE 298
RGI ++IFNK +N+++ + + K E ++ + TEK E
Sbjct: 200 RGIVSRIFNK--KNQEVDVDELKKLRETEHEIEETEKELE 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,359,729
Number of Sequences: 28952
Number of extensions: 244625
Number of successful extensions: 860
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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