Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f12
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.92 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.1  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   2.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   8.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   8.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 13/69 (18%), Positives = 29/69 (42%)
 Frame = +2

Query: 473  VKTHFVSILDCKAMQAVYTKDTVPNRITSPQRILNETLNSFQTSDDQVTLEATTKSLVIK 652
            VK H  + +DC      Y  +    +   P  +++ +  +   ++D+ T    T+S   +
Sbjct: 955  VKKHITTTIDCSTQSEYYELEVKDQKNGKPPSVVSRSTQT-SANNDKDTNAVVTQSKEAR 1013

Query: 653  NYIDSNMDL 679
            + I +   L
Sbjct: 1014 DNITATKQL 1022


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 180 EMNYTWSHYPTVY 218
           E+ Y WSH+P V+
Sbjct: 110 EIYYIWSHFPYVF 122


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 449 CLKCKHGIVKTHFVSILDC 505
           C KCK+GI  +    I+ C
Sbjct: 43  CHKCKYGIAMSSACGIVQC 61


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 231 NVLNNIQSGNDSRYNS 184
           N+L NI  GN   YN+
Sbjct: 360 NILGNIIEGNADSYNT 375


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 231 NVLNNIQSGNDSRYNS 184
           N+L NI  GN   YN+
Sbjct: 360 NILGNIIEGNADSYNT 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,212
Number of Sequences: 438
Number of extensions: 3640
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)