Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10f11
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_26686| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_14641| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) 49 4e-06
SB_11193| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023) 45 7e-05
SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33) 44 9e-05
SB_19355| Best HMM Match : MFS_1 (HMM E-Value=1.8e-22) 44 1e-04
SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27) 44 1e-04
SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26) 42 6e-04
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_25744| Best HMM Match : MFS_1 (HMM E-Value=9.7e-23) 38 0.006
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 37 0.013
SB_50290| Best HMM Match : MFS_1 (HMM E-Value=2.2e-18) 35 0.071
SB_34014| Best HMM Match : MFS_1 (HMM E-Value=0.18) 34 0.094
SB_20627| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_36417| Best HMM Match : MFS_1 (HMM E-Value=0.0037) 32 0.38
SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_33586| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-36) 31 0.66
SB_14642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_22485| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 30 2.0
SB_42398| Best HMM Match : CaMBD (HMM E-Value=6.2) 29 2.7
SB_40144| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-14) 29 2.7
SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_4082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31860| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_43178| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 29 3.5
SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_8931| Best HMM Match : MFS_1 (HMM E-Value=0.012) 29 4.7
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 6.2
SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_29962| Best HMM Match : CBFB_NFYA (HMM E-Value=3.4) 28 8.1
>SB_54679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 491
Score = 70.1 bits (164), Expect = 2e-12
Identities = 48/181 (26%), Positives = 75/181 (41%)
Frame = +1
Query: 70 PEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAIAG 249
PEGG G+VVC +G IY + +DE + G
Sbjct: 20 PEGGRGWVVCAAAFFAMFTVFGIHISYGVIYANLVDEHGFGEAESAWIGSVAGSLNFLCG 79
Query: 250 FSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYT 429
A+ R V IG + L FL FV + ++ VT G L G+G GL S
Sbjct: 80 PVASFLCDRYGCRSVAFIGGILSVLGLFLTSFVQNPGKMYVTYGLLWGVGSGLSFTPSII 139
Query: 430 SFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGAL 609
YF K+ L + + G+ +L FI+F ++ +G++ ++ I+ I+ GAL
Sbjct: 140 VLGQYFRKRFPLANGIASSGSGIGGLLAAPFIQFLLSNFGWQNSMRILACIANILWIGAL 199
Query: 610 V 612
+
Sbjct: 200 L 200
>SB_26686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Frame = +1
Query: 64 VPPEGGWGYVVCVGLSVI-FIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLA 240
+P EGGWG++VC G ++ FI H FG +Y + LDEL
Sbjct: 32 LPVEGGWGWIVCAGTFIVNFIVFGIHNS-FGVVYVNLLDELKLGKAETAWIGAMAMGLNF 90
Query: 241 IAGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPV 420
+ G +I S + IGA + L FL FV ++ +T G L G+G L
Sbjct: 91 LCGPLTSILCTRYSCQATAFIGALLSVLGLFLTSFVQEPPKMYLTYGLLFGVGSSLSFVS 150
Query: 421 SYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIF 600
S YF K+ L + + G+ +++ + + + G++ + ++ +
Sbjct: 151 SIVILGEYFQKRLALVNGIATSGSGVGSLVTGPVMNYLLANIGWQNCMRVLSGFAMLLWI 210
Query: 601 GALVMHP 621
A + P
Sbjct: 211 AAFLFKP 217
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 54.8 bits (126), Expect = 6e-08
Identities = 40/187 (21%), Positives = 74/187 (39%), Gaps = 2/187 (1%)
Frame = +1
Query: 70 PEGGWGYVVCVG--LSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAI 243
P+GGWG++VC+ ++ + GT + FG IY + L E + +
Sbjct: 19 PDGGWGWLVCLAAFITQFIVLGTMNN--FGVIYVELLQEFKVGKAEAAWVGSITYGMMFL 76
Query: 244 AGFSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVS 423
G K + R ++G I L + + +T G + G+G + S
Sbjct: 77 LGPLGTTLCKKIGCRLTTVVGCIIAAGGCLLGSVAPNIYIMDLTYGLMFGVGASMCYFPS 136
Query: 424 YTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFG 603
+YF K+ L L A G+ ++ ++ I G R T+ I A+ + +
Sbjct: 137 VIILGTYFNKRLSLANGLTSAGSGVGSLAMGPILQKVIEAVGMRNTMRISAAMISSIVLV 196
Query: 604 ALVMHPV 624
+ + P+
Sbjct: 197 SAIYRPI 203
>SB_14641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 50.4 bits (115), Expect = 1e-06
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 1/181 (0%)
Frame = +1
Query: 82 WGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXX-FQVTLAIAGFSA 258
W + C V + G FG + F+ E TL + S+
Sbjct: 29 WVVLACAFAIVWLVGGIGFS--FGVVLPQFITEFNESRQNGALIGSIGIAFTLGESLLSS 86
Query: 259 NIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFN 438
++ ++ S R + +G + L+ S L VT+ FL G G ++ S+
Sbjct: 87 HLCMR-YSCRLIAALGHVLCAAGFLLSSTAPSLPVLFVTHSFLVGSGTCFIVSPSFLICE 145
Query: 439 SYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMH 618
YF K++ L + A +GL M + + I + G+RG + + A SIF L
Sbjct: 146 RYFKKRRSLAIGAISAGVGLGVMTWGPLSQQIINRLGWRGFYRLTAGLFAGSIFLTLSFD 205
Query: 619 P 621
P
Sbjct: 206 P 206
>SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)
Length = 839
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 2/182 (1%)
Frame = +1
Query: 82 WGYVVCVGLSV--IFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAIAGFS 255
W ++VCV S+ I I G +H F + L+ Q A
Sbjct: 407 WSFLVCVSASISTIIILGFSH--CFAVVMPVLLNYFNDSRQKIAWVGSITQCLTFFASPL 464
Query: 256 ANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSF 435
A + + LS R ++G+ ++ L F ++ + + L GLG L +
Sbjct: 465 AGLLIGKLSFRVTAVLGSLTCCISLVLTSFTKASLHIFFSYSVLYGLGSCLFYMSCVYAV 524
Query: 436 NSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVM 615
YF K++ L L + I + + ++ + YG+R T I+ + ++F L
Sbjct: 525 AEYFEKRRGLALGFLTSGISVGVLAQGPVLQVLLDAYGWRITFRIMAGVVGLALFLVLTF 584
Query: 616 HP 621
P
Sbjct: 585 DP 586
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/122 (20%), Positives = 52/122 (42%)
Frame = +1
Query: 256 ANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSF 435
A + + + R ++G+ ++ L F ++ + + L GLG L +
Sbjct: 60 AGLLIGRFNFRVTAVLGSLTCCISLVLTSFTKASLHIFFSYSVLYGLGSCLFYMSCVYAV 119
Query: 436 NSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVM 615
YF K++ L L + I + + ++ + YG+RGT I+ + ++F L +
Sbjct: 120 AEYFEKRRGLALGFLTSGISVGVLAQGPVLQVLLDAYGWRGTFRIMAGVVGVALFLLLTL 179
Query: 616 HP 621
P
Sbjct: 180 DP 181
>SB_11193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 45.2 bits (102), Expect = 5e-05
Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 1/182 (0%)
Frame = +1
Query: 79 GWGYVVCVG-LSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQVTLAIAGFS 255
GW ++VC G ++FI H FG + N L+ L +
Sbjct: 49 GWAWMVCAGSFLIMFIVYGIHTS-FGVLLNALLNHFHESKAKTAWVGSIGLNFLFLGSPV 107
Query: 256 ANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSF 435
+ + +R V ++G +L FL + + + +T G L G G L ++
Sbjct: 108 TSRVAERYGIRTVTILGGVFISLGLFLTSYAPNIVVIYITYGLLFGSGTSLCGTMALIIS 167
Query: 436 NSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVM 615
YF K L + A + T++ ++F + + G+R + I+ V
Sbjct: 168 VDYFDKHLSLATGIVAAGCSIGTLVLAPTLQFLVEKLGWRYAVRILAMSGVFIACAGFVY 227
Query: 616 HP 621
P
Sbjct: 228 RP 229
>SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023)
Length = 247
Score = 44.8 bits (101), Expect = 7e-05
Identities = 35/181 (19%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Frame = +1
Query: 73 EGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXX-FQVTLAIAG 249
+G + VC V+ + + +G I+ LDE +++ +
Sbjct: 32 DGSRAWFVCFAAFVVSVLIISCSQTYGTIFPVLLDEFQEGKAKTAWVGSLAIALSMTFSP 91
Query: 250 FSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYT 429
+A ++ R V LIG + L F+ + + + +T + G G L +Y
Sbjct: 92 IAAKF-IERFGPRLVSLIGGIVAALGLFITSQISTIDIMYLTYSVVFGFGSSCLYTSAYA 150
Query: 430 SFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAIS-AHSIFGA 606
+F K + + + +S+G I+++ + IK +++YG+R T ++ + A ++ G
Sbjct: 151 VVPGHFIKWQSTAIGVMGSSVG-ISLMSSMLIKTLLSKYGWRTTFMVMGGFALASAVIGG 209
Query: 607 L 609
+
Sbjct: 210 I 210
>SB_25430| Best HMM Match : MFS_1 (HMM E-Value=1.3e-33)
Length = 607
Score = 44.4 bits (100), Expect = 9e-05
Identities = 45/185 (24%), Positives = 66/185 (35%), Gaps = 2/185 (1%)
Frame = +1
Query: 73 EGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXX-FQVTLAIAG 249
+GG+ +VVC VI + Q G I+ +DE + L
Sbjct: 34 DGGYAWVVCFAAFVILLITVGQQNCSGIIFVALMDEYKQGRGATAWVTSLAVSLNLTFGP 93
Query: 250 FSANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYT 429
SA + + R ++G I ++ FL+ F V L T G L GLG L +
Sbjct: 94 LSAFLCQR-FGCRVTAMLGGGICAVSLFLSAFAVDLYLLYFTYGVLLGLGNSLCYTSALI 152
Query: 430 SFNSYFTKKKVLYLSLCKASIGL-ITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGA 606
+ YF + L SL L I +L PL +K R + I + G
Sbjct: 153 ALTLYFRRHIALANSLGFLGPALGIVILTPL-LKHLFQTLSLRYVFFALSVIQIIIVAGG 211
Query: 607 LVMHP 621
P
Sbjct: 212 SAFRP 216
>SB_19355| Best HMM Match : MFS_1 (HMM E-Value=1.8e-22)
Length = 572
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R + +G+ ++ AS + ++ S + T GF+ G G L+ S YFT K L
Sbjct: 44 RIIACVGSLLFMTASLITSYMSSIIPMYFTFGFMGGFGFSLMYFSSLFVLMQYFTDKLSL 103
Query: 466 YLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHP 621
+ A G +M + L + + YG + + + V HP
Sbjct: 104 ANGVVLAGSGCGSMAFSLLLGKMCSLYGVHAGFKTLAVAGVIGVLASSVYHP 155
>SB_54925| Best HMM Match : MFS_1 (HMM E-Value=4.7e-27)
Length = 1373
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/124 (22%), Positives = 50/124 (40%)
Frame = +1
Query: 277 LSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKK 456
L R V G+ ++ +A+FL V + T + +T G L G L+ S YF +
Sbjct: 116 LGCRIVACTGSLLFLIAAFLTSLVSNMTYMYLTFGILGGFAFSLMYFASLVVLIEYFNRH 175
Query: 457 KVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPVQWYM 636
L + + G T++ + + +YG R I +S L P+ +
Sbjct: 176 LSLANGIAVSGSGAGTLVISMIVDEMCRRYGLRAGFRFIAGMSFLGFIAGLSFAPLSKHP 235
Query: 637 VKKL 648
++ L
Sbjct: 236 MEPL 239
>SB_41721| Best HMM Match : MFS_1 (HMM E-Value=2.2e-26)
Length = 440
Score = 41.5 bits (93), Expect = 6e-04
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R V L G L F+ V + + +T F+ G G + +YT +FTK +
Sbjct: 99 RLVSLAGGVFAALGLFITSQVNTIAMMYLTYSFIFGFGSSCVFTPAYTVVPGHFTKWQST 158
Query: 466 YLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAIS-AHSIFGAL 609
+ L +S GL ++ + IK ++ YG+R T + + A ++ G +
Sbjct: 159 AMGLMGSSNGL-SLAMSMLIKTLLSNYGWRVTFMAMGGFALADAVIGGI 206
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/127 (20%), Positives = 50/127 (39%)
Frame = +1
Query: 298 LIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLYLSL 477
+ G + T++ + F + Q+ GLG + N YF K+ L L +
Sbjct: 1 MAGVIMCTVSVVVMSFTENIIQMFFAYSLPYGLGSCFVFISGVFVINKYFNKRHALALGI 60
Query: 478 CKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPVQWYMVKKLKTC 657
+ + + + I +YG+R I+ AI + F L +P + +
Sbjct: 61 YNTGVNIGVLTLAPLCQVIIEKYGWRSMYRIMTAIVGLAFFLTLTFNPNAMSSMSDEQKK 120
Query: 658 EKIVLIP 678
E+++L P
Sbjct: 121 EQVILEP 127
>SB_25744| Best HMM Match : MFS_1 (HMM E-Value=9.7e-23)
Length = 403
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R + G F+ +A + + S L VT G GLG L YF K + L
Sbjct: 85 RATAIAGGFVCAIAFLSSAYSPSLELLYVTYGVGLGLGTSLCFCSGLGIIPMYFEKHQAL 144
Query: 466 YLSLCK--ASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPV 624
SL + A +G +T L PL +++ + GF T+ I + L PV
Sbjct: 145 AYSLGQLGAPVGTLT-LTPL-LQYLFNKLGFSLTMVAIAGFHIIVVISGLTYRPV 197
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 37.1 bits (82), Expect = 0.013
Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Frame = +1
Query: 70 PEGGWGYVVCVGLSVIFIAGTAHQPVFGFIYNDFLDELXXXXXXXXXXXXXFQV------ 231
PEGGWG++VC+ + Q G +Y L E ++
Sbjct: 794 PEGGWGWLVCLAGFIAQFTILGIQNNTGILYTTLLTEFKGNKGDTGILNPKNELSPKNTQ 853
Query: 232 -------------TLAIAGFSANIAL-KSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLI 369
T I +A AL + + R V ++G + L L+ FV L
Sbjct: 854 KNATFIPVTKIRGTFEIRQCTALGALCERVGCRVVAVVGGLLGVLGFLLSSFVKDLYILY 913
Query: 370 VTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYG 549
VT G L G+G + + + +F ++ L + A G T+ ++ T+T G
Sbjct: 914 VTFGVLWGIGSSMCYLPTLRALPYWFRRRISLTNGIVTAGSGFGTIAMGPLMQLTVTYLG 973
Query: 550 FRGT------LAIICAISA 588
+ T + ++CAISA
Sbjct: 974 WAHTTRILAGVLLLCAISA 992
>SB_50290| Best HMM Match : MFS_1 (HMM E-Value=2.2e-18)
Length = 534
Score = 34.7 bits (76), Expect = 0.071
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 334 LAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVLYLSLCKA--SIGLITM 507
L F S + +T GFL GLG + + YF K++ L + A S+G+IT
Sbjct: 232 LTSFCESLLLMYLTYGFLFGLGACFIHTGCVFAVTMYFNKRRSLATGIMGASQSLGIIT- 290
Query: 508 LYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHP 621
L P+ ++ + G+R T I+ A+ + ++ A P
Sbjct: 291 LAPV-LQELLHSLGWRNTYRILGALFSLALIAAFSFDP 327
>SB_34014| Best HMM Match : MFS_1 (HMM E-Value=0.18)
Length = 195
Score = 34.3 bits (75), Expect = 0.094
Identities = 21/99 (21%), Positives = 44/99 (44%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R+ ++G ++ ++ F + G L G+G G + + YF K++ L
Sbjct: 89 RRTAIVGTLTCAVSLIISSFAPGLLMMYFIYGALFGIGGGFIHTSGLLTTTKYFYKRRSL 148
Query: 466 YLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAI 582
+ A + T++ P++ + I G+R + II A+
Sbjct: 149 ATGIVAAGASIGTLIGPVY-QALIDGVGWRNSYRIIGAL 186
>SB_20627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 70 PEGGWGYVVCVG--LSVIFIAGTAHQPVFGFIYNDFLDE 180
P+GGWG++VC+ ++ + GT + FG IY + L E
Sbjct: 102 PDGGWGWLVCLAAFITQFIVLGTMNN--FGVIYVELLQE 138
>SB_36417| Best HMM Match : MFS_1 (HMM E-Value=0.0037)
Length = 547
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 70 PEGGWGYVVC-VGLSVIFIAGTAHQPVFGFIYNDFLDE 180
PEGGWG+VVC FI H FG ++ LDE
Sbjct: 64 PEGGWGWVVCATAFLAQFIVLGIHNS-FGILFPFLLDE 100
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 442 YFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAII 573
YF K+ L + A G+ T+ + +++ + YGF TL I+
Sbjct: 124 YFCKRLSLANGIITAGSGVGTLTFGPLLQYLLKTYGFSSTLRIL 167
>SB_8625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSF-NSYFTKKKV 462
R V + + I + + FV + L T GF+ GLG GL+ VS T + NS+FT +
Sbjct: 294 RVVFMSSSLITIIGLVSSSFVPNIVLLYFTYGFMNGLG-GLIADVSGTGYTNSFFTAGAI 352
Query: 463 LYLSLC 480
++ C
Sbjct: 353 EVVAGC 358
>SB_33586| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-36)
Length = 355
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 406 LLIPVSYTSFNSYFTKKKVLYLSLCKASIGLITMLYPL 519
+L+ +S+ +S + LY++LC A + + T++YPL
Sbjct: 73 ILVFISFARNSSLRRPRYFLYINLCAADLAIATLVYPL 110
>SB_14642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +1
Query: 442 YFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHP 621
YF KK+ + + + A GL M P ++ + +G+R + ++ + S L P
Sbjct: 79 YFKKKRSMAVGMVTAGAGLGVMTIPPLAQYFVDTFGWRDAMRLLACLYVGSCVCTLAYSP 138
>SB_22485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 519
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 499 ITMLYPLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPVQ 627
I +LYPL IK+ IT+ F + I+ +SA +I ++ Q
Sbjct: 127 IALLYPLNIKYRITKRRFYIIMVIVYVVSAWAILPYMIFQEYQ 169
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/112 (21%), Positives = 43/112 (38%)
Frame = +1
Query: 253 SANIALKSLSLRQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTS 432
+A + ++ R +IG + ++ V L + L G G L S+
Sbjct: 83 TAGMIVQKFGCRLTCVIGGLSCAIGLGVSSLVDKMDYLFGSYSLLFGFGCSCLFNSSFVV 142
Query: 433 FNSYFTKKKVLYLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAISA 588
YF + L L A ++ ++ I YG+R TL +I A ++
Sbjct: 143 VTRYFDRYLSLATGLVTAGQSAGIFMFGPALQALIDAYGWRVTLRVIAATTS 194
>SB_42398| Best HMM Match : CaMBD (HMM E-Value=6.2)
Length = 159
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 285 KTSRSYRCLYIHTSIIPSNIC 347
KTSR Y C Y H + PS++C
Sbjct: 68 KTSRDYPCAYAHDTDQPSDLC 88
>SB_40144| Best HMM Match : 7tm_1 (HMM E-Value=4.8e-14)
Length = 341
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 605 APKIL*ADMAQIIARVPLNPYWVIVNFINSGYNIVINPIDALHRLKYS 462
A +L +A + +P N YWVI N S +N +N AL L+YS
Sbjct: 217 AVTLLIVTLASLATWIPFNCYWVIHNLDFSFFNFTVN--IALLFLQYS 262
>SB_37909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 285 KTSRSYRCLYIHTSIIPSNIC 347
KTSR Y C Y H + PS++C
Sbjct: 51 KTSRDYPCAYAHDTDQPSDLC 71
>SB_4082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 285 KTSRSYRCLYIHTSIIPSNIC 347
KTSR Y C Y H + PS++C
Sbjct: 6 KTSRDYPCAYAHDTDQPSDLC 26
>SB_31860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 285 KTSRSYRCLYIHTSIIPSNIC 347
KTSR Y C Y H + PS++C
Sbjct: 6 KTSRDYPCAYAHDTDQPSDLC 26
>SB_43178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +1
Query: 514 PLFIKFTITQYGFRGTLAIICAISAHSIFGALVMHPVQWYM 636
P+ F + YG R T I A++A ++ H + W M
Sbjct: 430 PIIGGFLVADYGIRATFLIFGALAAGVAIFSVTAHVIHWLM 470
>SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 1799
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 273 FQSYVRRKTGNS*CDLKHSIYNCNGASTDAKFVQKIIVYKTKNRLMRGASNE 118
+QSY+ R+ N C ++S++N F +K + K+R+ S+E
Sbjct: 42 YQSYLSRRKFNFICKTQNSVFNAESEVGSTTFSRKSASRRRKSRISPQLSSE 93
>SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = -1
Query: 273 FQSYVRRKTGNS*CDLKHSIYNCNGASTDAKFVQKIIVYKTKNRLMRGASNE 118
+QSY+ R+ N C ++S++N F +K + K+R+ S+E
Sbjct: 80 YQSYLSRRKFNFICKTQNSVFNAESEVGSTTFSRKSASRRRKSRISPQLSSE 131
>SB_38622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3824
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R V + + I + + FV + L T GF+ GLG+ L+ + YF ++++L
Sbjct: 3477 RVVFMSSSLITIMGLVSSSFVPNIVLLYFTYGFVNGLGVNLMYISTMMVPALYFKRRRML 3536
Query: 466 YLSLCKASIG 495
++ A G
Sbjct: 3537 ATAIVSAGPG 3546
>SB_8931| Best HMM Match : MFS_1 (HMM E-Value=0.012)
Length = 266
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/99 (23%), Positives = 41/99 (41%)
Frame = +1
Query: 286 RQVGLIGAFIYTLASFLAIFVVSTTQLIVTNGFLQGLGMGLLIPVSYTSFNSYFTKKKVL 465
R V + + I + + FV + L T GF+ GLG L+ S YF ++++L
Sbjct: 28 RVVFMSSSLITIMGLVSSSFVPNIVLLYFTYGFVNGLGGNLMYISSMMVPALYFKRRRML 87
Query: 466 YLSLCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAI 582
+ A G + ++ +R TL + A+
Sbjct: 88 ATAFVSAGPGAGLFIMSPIVEAIHKVLDWRKTLLCLAAL 126
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +3
Query: 498 DNDVVPAVYKIY-DNPIRV*RD-----SSDYLCHISSQYFRSSSHASCTMVYGEE 644
+N+V+P+V I D P+ V RD S Y C S+ + S+ + VYG E
Sbjct: 2444 NNEVIPSVGGIQSDRPVLVLRDVIAQDESPYYCQASNDAGTAKSNIATLKVYGGE 2498
>SB_40873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2496
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 475 LCKASIGLITMLYPLFIKFTITQYGFRGTLAIICAIS 585
LC S ++ +LYP + ITQ + T+ ++ A+S
Sbjct: 107 LCLTSNRMVAVLYPFHYEAMITQEKIQITIGVVWAVS 143
>SB_29962| Best HMM Match : CBFB_NFYA (HMM E-Value=3.4)
Length = 172
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -1
Query: 651 FQFLHHIPLYRMHD*SSENTVS*YGTNNR*SPSKPVLGYR 532
F ++H + R+ + +E+ S G N +P+ P++GYR
Sbjct: 36 FWYIHKTKILRIREWVTESYKSVSGLQNPKNPTNPLVGYR 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,167,915
Number of Sequences: 59808
Number of extensions: 407868
Number of successful extensions: 1107
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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