Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10f10
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 308 2e-83
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 308 2e-83
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 308 2e-83
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 308 2e-83
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 308 2e-83
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 305 6e-83
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 300 3e-81
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 298 1e-80
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 245 1e-64
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 1.5
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 1.5
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.5
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.5
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 30 8.1
AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens ... 30 8.1
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 30 8.1
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 30 8.1
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 308 bits (755), Expect = 2e-83
Identities = 141/164 (85%), Positives = 155/164 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 308 bits (755), Expect = 2e-83
Identities = 141/164 (85%), Positives = 155/164 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 308 bits (755), Expect = 2e-83
Identities = 141/164 (85%), Positives = 155/164 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 308 bits (755), Expect = 2e-83
Identities = 141/164 (85%), Positives = 155/164 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 170
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 308 bits (755), Expect = 2e-83
Identities = 141/164 (85%), Positives = 155/164 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 305 bits (750), Expect = 6e-83
Identities = 140/164 (85%), Positives = 154/164 (93%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 171
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 300 bits (736), Expect = 3e-81
Identities = 138/161 (85%), Positives = 152/161 (94%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQK 579
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQK
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQK 167
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 298 bits (731), Expect = 1e-80
Identities = 137/164 (83%), Positives = 152/164 (92%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHC VRGAKAEEILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGL
Sbjct: 69 AVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGL 128
Query: 457 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 588
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDG
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDG 172
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 245 bits (599), Expect = 1e-64
Identities = 116/125 (92%), Positives = 120/125 (96%)
Frame = +1
Query: 97 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 276
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 277 AVHCTVRGAKAEEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 456
AVHCTVRGAKAEEILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 457 DFYVV 471
DFYVV
Sbjct: 127 DFYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 121 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 228
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 91 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 252
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 91 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 252
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 91 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 252
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 91 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 252
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens cDNA
FLJ46149 fis, clone TESTI4000621, moderately similar to
Homo sapiens Snf2-related CBP activator protein (SRCAP).
).
Length = 2427
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1737 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1786
>AK126463-1|BAC86558.1| 559|Homo sapiens protein ( Homo sapiens
cDNA FLJ44499 fis, clone UTERU3000665, highly similar
to Homo sapiens Snf2-related CBP activator protein
(SRCAP). ).
Length = 559
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 386 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 435
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1478 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1527
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 434 GSYLIPKSMCS*IPKPKLPVAEKLSRRNSYSLTFKPLSRISSALAPRTVQ 285
G L P S P P L A + +++LT P S +S LAP +VQ
Sbjct: 1560 GPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQ 1609
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,111,998
Number of Sequences: 237096
Number of extensions: 2013831
Number of successful extensions: 11557
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11557
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -