Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10f07
         (597 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69793-5|CAA93673.2|  441|Caenorhabditis elegans Hypothetical pr...   107   8e-24
Z69793-6|CAI46593.1|  424|Caenorhabditis elegans Hypothetical pr...   106   1e-23
AL031621-5|CAA20930.1|  437|Caenorhabditis elegans Hypothetical ...   105   3e-23
Z82078-2|CAD54160.1|  714|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z82078-1|CAB04944.2|  707|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U80029-17|AAB37596.2|  330|Caenorhabditis elegans Serpentine rec...    27   7.7  

>Z69793-5|CAA93673.2|  441|Caenorhabditis elegans Hypothetical
           protein R03A10.4a protein.
          Length = 441

 Score =  107 bits (256), Expect = 8e-24
 Identities = 61/123 (49%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +3

Query: 231 SVCRTMAEKFRLP-ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQ 407
           S CR  +     P ER      S+WVE+  LAAE K AVNLGQGFPD  APK VT+ L  
Sbjct: 14  SRCRMSSSFAPKPAERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLEN 72

Query: 408 IATS-ENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILG 584
           ++   E    HQYTRG+G P LV+ L+K+YS     Q+D  NE+LVT GAY +LY   LG
Sbjct: 73  LSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLG 132

Query: 585 HVD 593
            V+
Sbjct: 133 WVN 135


>Z69793-6|CAI46593.1|  424|Caenorhabditis elegans Hypothetical
           protein R03A10.4b protein.
          Length = 424

 Score =  106 bits (255), Expect = 1e-23
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
 Frame = +3

Query: 270 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATS-ENPLLHQYT 446
           ER      S+WVE+  LAAE K AVNLGQGFPD  APK VT+ L  ++   E    HQYT
Sbjct: 11  ERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYT 69

Query: 447 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVD 593
           RG+G P LV+ L+K+YS     Q+D  NE+LVT GAY +LY   LG V+
Sbjct: 70  RGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVN 118


>AL031621-5|CAA20930.1|  437|Caenorhabditis elegans Hypothetical
           protein F28H6.3 protein.
          Length = 437

 Score =  105 bits (251), Expect = 3e-23
 Identities = 56/108 (51%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = +3

Query: 270 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSENPL-LHQYT 446
           E  G  ++S+WVE+ +LA E K AV+LGQGFPD  APK VTE L  IA+    +  HQYT
Sbjct: 11  ENVGEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYT 69

Query: 447 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHV 590
           R FG P LV  LSK+YS   G  ++A ++IL+T GAY ALY + LG +
Sbjct: 70  RAFGHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWI 117


>Z82078-2|CAD54160.1|  714|Caenorhabditis elegans Hypothetical
           protein W09D6.1b protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 213 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 320
           HF I  ++ CR+   K R+   YG  E S W  Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278


>Z82078-1|CAB04944.2|  707|Caenorhabditis elegans Hypothetical
           protein W09D6.1a protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 213 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 320
           HF I  ++ CR+   K R+   YG  E S W  Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 408  IATSENPLLHQYTRGFGLPRLV 473
            + ++EN +  +YTR FG P+LV
Sbjct: 1387 VVSTENAMRMRYTRSFGKPKLV 1408


>U80029-17|AAB37596.2|  330|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 22 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
 Frame = +3

Query: 105 ALSRFIYLLIFIMFRTSRGLFAAVNYSSLSRSVKIEHFIRQLSVCRTMAEKFRLPERYGA 284
           A+  F  +L  +MFR +  L + +  SSLS    +E  ++ +   +  A    L   +  
Sbjct: 197 AIQIFGRILFELMFRKNEELRSKLLTSSLSNRYSLEQNVKSMETLKVFA---NLQSIFLT 253

Query: 285 GEKSV--WVEYIQLAAE---YKPAVNLGQGFPDY 371
            + ++  ++ Y+ LA E   Y   + L  G+P Y
Sbjct: 254 AQMTIFLFILYLGLAIEKTTYISLIELNAGYPIY 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,149,237
Number of Sequences: 27780
Number of extensions: 272297
Number of successful extensions: 555
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)