Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e21
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0...    34   4.1  
UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n...    33   5.4  
UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system, pe...    33   5.4  
UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2; C...    33   7.2  
UniRef50_UPI0000E24C21 Cluster: PREDICTED: similar to breast can...    33   9.5  
UniRef50_A5KB17 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  
UniRef50_A5E532 Cluster: Exocyst complex component EXO84; n=1; L...    33   9.5  
UniRef50_Q8M9T2 Cluster: Putative membrane protein ycf1; n=1; Ch...    33   9.5  

>UniRef50_A2EER3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 663

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -2

Query: 623 YVINTKNIQFVKKILLSYIFSLSID*NFCYKI*N-GLITLFDCTF--CTNSQLYLKEFL* 453
           + + + NI+FV  +L +Y F   +D   CY   N     LF  TF  C++  LY+ EF+ 
Sbjct: 238 FAVASHNIEFVTYLLNNYTF--DVDLRICYNYNNLQSFLLFIDTFKLCSSGLLYISEFMG 295

Query: 452 SNFL 441
           +N L
Sbjct: 296 NNIL 299


>UniRef50_Q8IBY8 Cluster: Putative uncharacterized protein PF07_0042;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF07_0042 - Plasmodium falciparum
            (isolate 3D7)
          Length = 2910

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +3

Query: 327  VNVDIDIDQDSNEFLNVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIE 506
            +N+ +D ++  NE LN+ +  EK+ N   +  L  + E+   +   LE + G++ K T++
Sbjct: 2006 LNILLDQNKKINEELNIQVEQEKLINNEIIVQLKKENEENNKINSLLEEQNGLNKKVTLQ 2065


>UniRef50_UPI00006CD129 Cluster: TPR Domain containing protein; n=2;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 878

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
 Frame = -2

Query: 479 QLYLKEFL*SNFLFYVSIQIS*TVAI-VDFFNKNIDIQEF 363
           +L +K++    F+F  S+QI  T+ I +DFF++NI++ +F
Sbjct: 674 KLSIKQYFIDEFIFNSSVQIELTLLIQMDFFSQNINLSQF 713


>UniRef50_Q03DM1 Cluster: ABC-type multidrug transport system,
           permease component; n=16; Bacilli|Rep: ABC-type
           multidrug transport system, permease component -
           Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
          Length = 380

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
 Frame = +3

Query: 378 DILVEKIYNGYGLTDLNTDIEK----KIALQKFLEVELGISAKSTIEERNQAILDFVTKI 545
           D ++EK  N + +T  NTD  K    K+A +  + V      K  +E+ N+A+ +  TK+
Sbjct: 89  DTIIEKDGNNFNITYANTDATKTATTKMAFKNAVTVNNIKQLKKHLEQSNRALNELQTKL 148

Query: 546 SVNTQTKDVAQKNL 587
           ++ T+ K V  K++
Sbjct: 149 ALVTK-KSVKTKSM 161


>UniRef50_A0GWH4 Cluster: Lipopolysaccharide biosynthesis; n=2;
           Chloroflexus|Rep: Lipopolysaccharide biosynthesis -
           Chloroflexus aggregans DSM 9485
          Length = 349

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 14/39 (35%), Positives = 27/39 (69%)
 Frame = +3

Query: 423 LNTDIEKKIALQKFLEVELGISAKSTIEERNQAILDFVT 539
           LNTD ++ +A QKF E +L    ++ +++  QA++DF++
Sbjct: 159 LNTDFQESVAAQKFFE-DLIAPYQADVDQARQALIDFLS 196


>UniRef50_UPI0000E24C21 Cluster: PREDICTED: similar to breast cancer
           antigen NY-BR-1; n=1; Pan troglodytes|Rep: PREDICTED:
           similar to breast cancer antigen NY-BR-1 - Pan
           troglodytes
          Length = 532

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 25/93 (26%), Positives = 43/93 (46%)
 Frame = +3

Query: 330 NVDIDIDQDSNEFLNVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIEE 509
           +V + ++Q+  +  NVDIL EKI        L   +E K  L++ L ++  I  KS    
Sbjct: 299 SVRLTLNQEEEKRKNVDILKEKIRPE---EQLRKKLEVKQQLEQALRIQ-DIELKSVTSN 354

Query: 510 RNQAILDFVTKISVNTQTKDVAQKNLFDKLNIL 608
            NQ I     +++   +   V +   F+ + IL
Sbjct: 355 LNQEIAMLKLEVATLKRQHQVKENKYFEDIKIL 387


>UniRef50_A5KB17 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 140

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -1

Query: 333 HLLLSF--GFSCPFSLGSFCHLFQASFFPWPLIFLTSCLPSPIFFP 202
           HL ++F   F CPF    FC  F   F+P+ L    +  P P  +P
Sbjct: 60  HLCVNFPCAFFCPFFYPFFCPFFYPFFYPFFLSIFLAHFPCPFSWP 105


>UniRef50_A5E532 Cluster: Exocyst complex component EXO84; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Exocyst
           complex component EXO84 - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 812

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +3

Query: 363 EFLNVDILVEKIYNGYG-LTDLNTDIEKKIA-LQKFLEVELGISAKSTIEERNQAILDFV 536
           EF +VDI + +  N +     L T IEK++   + +L  +   SA S   + ++++L  V
Sbjct: 557 EFDDVDINISR--NKFADAVQLVTAIEKRLLKFENYLAKQRN-SASSLANQTDESLLLEV 613

Query: 537 TKISVNTQTKDVAQKNLFDKLN 602
           TK+ V  +  ++ Q  LFD LN
Sbjct: 614 TKLKVENRKDEIIQCLLFDLLN 635


>UniRef50_Q8M9T2 Cluster: Putative membrane protein ycf1; n=1;
            Chaetosphaeridium globosum|Rep: Putative membrane protein
            ycf1 - Chaetosphaeridium globosum
          Length = 1450

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 11/130 (8%)
 Frame = +3

Query: 372  NVDILVEKIYNGYGLTDLNTDIEKKIALQKFLEVELGISAKSTIEERNQAI------LDF 533
            N  IL EK++N   + + N  IEK I  +K  ++   I  K  +   N++I      LDF
Sbjct: 877  NTIILFEKVFNKKRINEDNKTIEKSILNKKNEQL---ILKKDEVIPNNKSIAGKLSKLDF 933

Query: 534  ----VTKISVNTQTKDVAQKNLFDKLNILGVNYXXXXXXXXXXXXGSDELNKITNPLINT 701
                +TK S+   TK +  KN ++ L  L  N               + LNK+   LI  
Sbjct: 934  HNQNITKTSIKNATKQILIKNEYNSL--LKENKNLFTKNKIVFLKIKNILNKLNLKLIKV 991

Query: 702  -VDXTVKEKT 728
             ++ T K KT
Sbjct: 992  KINFTYKIKT 1001


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,225,412
Number of Sequences: 1657284
Number of extensions: 7371104
Number of successful extensions: 21037
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20878
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)