Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e21
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    27   0.21 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   1.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   5.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 357 NPGLYQYPHLLLSFGFSCPFSLGSF 283
           +PG   +P+ ++S G+S P S GS+
Sbjct: 120 SPGPPSHPYTVISNGYSSPMSSGSY 144


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 294 LGSFCHLFQASFFPWPLIFLT 232
           LG    LF    F WPL+F+T
Sbjct: 225 LGEMVGLFN-DIFGWPLVFIT 244


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 348 LYQYPHLLLSFGFSCPFSL 292
           L  YPHL   F FS P ++
Sbjct: 351 LNTYPHLFNFFEFSVPLAI 369


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 713 SXIDCIYQRVSNFIKFV*SKLNDFIF*LFQY 621
           S ID  Y +   +IK V S L DFI   F +
Sbjct: 41  SSIDRPYLKSYTYIKLVVSVLMDFIAYFFNF 71


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 257 KKEA*KR*QKEPSEKGQEKPKERSKCGY*YR 349
           KKE  +  + EP  K ++    + K  Y YR
Sbjct: 214 KKEVKEEIEDEPDHKWKKNDSSKKKTRYYYR 244


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 561  TKDVAQKNLFDKLNILGVN 617
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 561  TKDVAQKNLFDKLNILGVN 617
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 561  TKDVAQKNLFDKLNILGVN 617
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +3

Query: 561  TKDVAQKNLFDKLNILGVN 617
            T DVA K  F KLN  G N
Sbjct: 1433 TLDVAFKKRFAKLNANGTN 1451


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 508 SSIVLFALIPNSTSRNFCKAIFFSMS 431
           + I +F  I +++ RNF  A FF ++
Sbjct: 290 NEIKMFVKIVDASCRNFTAARFFELN 315


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 447 FSFLCQYSNQLNRSHCRFFQQ 385
           F FLC+++ +  +++  FF Q
Sbjct: 144 FDFLCRHTVEYFQNYIHFFYQ 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,307
Number of Sequences: 336
Number of extensions: 2055
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)