Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e14
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0669 + 10295160-10295356,10296003-10296045                       39   0.002
07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207           28   6.0  
02_02_0379 + 9565001-9565515,9565553-9565833,9565884-9566084,956...    28   6.0  
05_03_0039 - 7621613-7622695                                           23   7.1  

>03_02_0669 + 10295160-10295356,10296003-10296045
          Length = 79

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +2

Query: 167 SGSTLYAGSFHLGKYCETINNEYMLCRQEENDPRKCINEGKAVTACTLE 313
           + S L A S H+   C   N  ++ C++++ +P+KC+ +G+ V  C  +
Sbjct: 17  TSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPQKCLEKGRQVKRCVFD 65


>07_01_0642 - 4795536-4795628,4795941-4796063,4796962-4797207
          Length = 153

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 206 KYCETINNEYMLCRQEENDPRKCINEGKAVTACTLEFFRKVKKTCLAEFNQYSNCLDKS 382
           K C+T+ ++Y  C     +PR C     A   C  +   ++ K C    +  S CL ++
Sbjct: 92  KKCKTLIDKYEECSNPPKEPRLCPAHELAFEKCLQKNVGEI-KVCQFWMDMMSKCLRRN 149


>02_02_0379 +
           9565001-9565515,9565553-9565833,9565884-9566084,
           9566253-9566309,9566955-9567019,9567199-9567420
          Length = 446

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +2

Query: 413 KTQGVFDQCMLEKLNLPRPGFGYFCEARVHDTKRPKPLPEPKAVYPGRHASS 568
           K  G+F++ +  +L LP P   +    + H  + P P P P A     HA++
Sbjct: 367 KVTGIFEEDLPGEL-LPMPDPSWERPLKPHPLREPSPTPHPPASDAVAHAAT 417


>05_03_0039 - 7621613-7622695
          Length = 360

 Score = 23.4 bits (48), Expect(2) = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 488 EARVHDTKRPKPLPEPK 538
           E ++H    PKP PEP+
Sbjct: 215 EPKLHPKPEPKPHPEPE 231



 Score = 22.6 bits (46), Expect(2) = 7.1
 Identities = 8/14 (57%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +2

Query: 515 PKPLPEPKAV-YPG 553
           PKP+P+PK + +PG
Sbjct: 270 PKPVPKPKPIPHPG 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,978,509
Number of Sequences: 37544
Number of extensions: 303201
Number of successful extensions: 725
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)