Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10e12
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 6e-57
SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 9e-15
SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11) 64 1e-10
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06) 52 4e-07
SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77) 43 2e-04
SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_32164| Best HMM Match : ECH (HMM E-Value=0.02) 34 0.082
SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_28781| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 29 3.1
SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11) 28 5.4
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_38336| Best HMM Match : UCR_TM (HMM E-Value=4.6) 27 9.4
>SB_43237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 217 bits (530), Expect = 6e-57
Identities = 108/171 (63%), Positives = 124/171 (72%), Gaps = 2/171 (1%)
Frame = +1
Query: 118 SATSQASIKFYSTA--SYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVND 291
SA+S + + +A SYE+I E G NVG IQLNRPKALNALC L EL A++
Sbjct: 20 SASSLRYTRAFCSAKKSYEHILTETKGESNNVGFIQLNRPKALNALCNDLMYELSDALDA 79
Query: 292 FDADSNIAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVN 471
F+AD N+ I++TG +AFAAGADIKEMQ TY FL W +S C KP+IAAVN
Sbjct: 80 FEADKNVGCIVLTGCGRAFAAGADIKEMQPLTYQKCLSGDFLGHWTRVSKCTKPVIAAVN 139
Query: 472 GFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKS 624
GFALGGGCELAM+CDIIYA +KAKFGQPEI IGTIPGAGGTQRL R VGKS
Sbjct: 140 GFALGGGCELAMMCDIIYASDKAKFGQPEILIGTIPGAGGTQRLTRAVGKS 190
>SB_6823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 77.4 bits (182), Expect = 9e-15
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Frame = +1
Query: 196 KKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEM 375
K V ++ + RP+ NA+ +L + F+ D ++ ++TG F AG+D++E+
Sbjct: 35 KGKVLVVSIARPEKRNAINSETADQLSETFRHFEIDDSVNVAVLTGKGGNFCAGSDLQEL 94
Query: 376 QNNTYSSNTKQGFLREWED--ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFG 549
+ K + D ++ +P+I A+ G+A+GGG ELA+LCD+ E + FG
Sbjct: 95 AQKDAETYMKSFYPPGEGDGPMAEANQPVIGAIQGYAVGGGLELALLCDLRVCEEDSVFG 154
Query: 550 QPEINIGTIPGAGGTQRLPRYVGKSK 627
G GG RLP +G S+
Sbjct: 155 FFNRRFGVPLVDGGAVRLPYLIGLSR 180
>SB_54248| Best HMM Match : ECH (HMM E-Value=6.6e-11)
Length = 230
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 448 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAK--FGQPEINIGTIPGAGGTQRLPRYVG 618
KP++AA+ G +GGG ELA+ C A K PE+ +G +PGAGGTQRLPR VG
Sbjct: 4 KPVVAAIMGTCMGGGLELALSCHYRIAVNDGKTVLSAPEVMLGLLPGAGGTQRLPRLVG 62
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 59.3 bits (137), Expect = 3e-09
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Frame = +1
Query: 241 NALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEM--QNNTYSSNTK--- 405
NAL + +L A+++ D ++ ++I G K F +G D + + NTK
Sbjct: 272 NALTIEMCEQLVAALHEASKD-DVNVVVIIGAGKYFCSGLDYTCVFTRGPQQKQNTKLLV 330
Query: 406 QGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGA 585
+ F E I +C KPIIAAVNG A G G L LCDI+Y EK G P
Sbjct: 331 ERFKLLVEVIIHCSKPIIAAVNGDAKGFGTSLVALCDIVYVCEKINLELSFTKWGHTPIG 390
Query: 586 GGTQRLPRYVG 618
T LP+ VG
Sbjct: 391 CCTYTLPQAVG 401
>SB_56936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 157 ASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGN 336
+ Y+ I+V K + I+LNRPK NA+ ++ E A+++ S+ ++TG
Sbjct: 68 SQYKEIEVTY---KDGIQTIKLNRPKKYNAITWEMYQEWINALDEGAKSSSCVVTLVTGA 124
Query: 337 EKAFAAGADIKEMQNNTYSSNTKQG-----FLREWED-ISNCGKPIIAAVNGFALGGGCE 498
+ +G D+ K LR++ + KP++AA+NG A+G
Sbjct: 125 GDYYCSGNDLSNFAKIPPEGPEKMARAGREVLRKFVSAFIDYPKPLVAAINGPAVGISVT 184
Query: 499 LAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRYVGKS 624
+ L D+++A ++A F P + +G P + P +G S
Sbjct: 185 VLGLFDLVFATDRATFHTPFMELGQSPEGCSSFTFPAIMGPS 226
>SB_31836| Best HMM Match : ECH (HMM E-Value=3.3e-06)
Length = 149
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +1
Query: 433 ISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQRLPRY 612
I C KP+IAAV+ +GGG ++ CDI A F E+ +G G QR+P+
Sbjct: 35 IEKCEKPVIAAVHSACVGGGVDMICACDIRLCTSDAWFQVKEVELGLAADVGTLQRMPKI 94
Query: 613 VG 618
VG
Sbjct: 95 VG 96
>SB_20977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 50.0 bits (114), Expect = 2e-06
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Frame = +1
Query: 232 KALNALCKPLFVELGKAVNDFDADSNIAAIIITGN-EKAFAAGAD-IKEMQNNTYSSNTK 405
K +N+ E+ + D +++++ +I+T + K F+AG D +KE+ Y S+ K
Sbjct: 6 KPVNSFSLEFLEEIHDTLEDLESNTDCRGLIVTSSMPKVFSAGLDLVKEL----YKSDEK 61
Query: 406 QGFL--REWEDI--SNCGKPI--IAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINI 567
+ F+ R ++D+ G + +AAVNG A+ GGC LA CD G E +
Sbjct: 62 RLFVFWRRFQDVWMQLYGSRLATVAAVNGHAVAGGCLLAAACDYRLMAANFTIGMNETIV 121
Query: 568 GTIPGAGGTQRLPRYVGKS 624
G +Q + VG S
Sbjct: 122 GIAIPFWISQNIVNLVGTS 140
>SB_20978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1683
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 346 FAAGADIKEMQNNTYSS--NTKQGFLREWEDISNCGKPIIAAVNGFALGGGCELAMLCDI 519
F AG D+KE+ S ++ F W + +AA+ G A+ GGC L++ CD
Sbjct: 1478 FCAGLDLKEVLALRKSKLVTFRKTFQDMWSRLYGSRLVTMAAIKGHAIAGGCVLSLACDY 1537
Query: 520 IYAGEKAKFGQPEINIGT--IPGAGGTQRLPRYVGKSK 627
+ G PE+++G P GT L VG+++
Sbjct: 1538 SVMASDFRIGLPELSLGLYFAPWMAGT--LSNAVGRNR 1573
>SB_31954| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 4/165 (2%)
Frame = +1
Query: 133 ASIKFYSTASYENIKVEVVGSKKNVGLIQLNRPKALNALCKPLFVEL-GKAVNDFDADSN 309
+S++F+ SY N K + I LN PK NAL + + ++D
Sbjct: 9 SSLEFFM--SYGNRKWSP-SQDNGIRRIVLNNPKKRNALSLAMLEAIRSDLLHDLQG--- 62
Query: 310 IAAIIITGNEKAFAAGADIKEMQNNTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGG 489
I+ I+++ N F++G D+KE+ +I G A
Sbjct: 63 ISVIVLSANGPVFSSGHDLKEL--------------------------LILLSTGLATAA 96
Query: 490 GCELAMLCDIIYAGEKAKFGQPEINIG---TIPGAGGTQRLPRYV 615
GC+L CD+ A +K++F P +NIG + PG + +PR V
Sbjct: 97 GCQLVASCDVAVASDKSQFATPGVNIGLFCSTPGVALARAVPRKV 141
>SB_58262| Best HMM Match : Cytochrom_B_C (HMM E-Value=0.77)
Length = 393
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 448 KPIIAAVNGFALGGGCELAMLCDIIYAGEKAKF 546
KP+I A+ G+A+GGG ELA+LCD+ E + F
Sbjct: 358 KPVIGAIQGYAVGGGLELALLCDLRVCEEDSVF 390
>SB_19701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +1
Query: 214 IQLNRPKALNALCKPLFVELGKAVNDFDADSNI-AAIIITGNEKAFAAGADI---KEMQN 381
++LNR +PL + L K + + + ++ +++++ + AGADI K +N
Sbjct: 49 VKLNRDGIYGIRQQPL-LPLRKVMQEITHNPDVKCSVLMSAKPGCWIAGADINMLKAGEN 107
Query: 382 NTYSSNTKQGFLREWEDISNCGKPIIAAVNGFALGGGCE 498
+ +G + ++ + + KP++AA+ G +GGG E
Sbjct: 108 AAQVTEIAKGGQQVYQFLEDSPKPVVAAIMGTCMGGGLE 146
>SB_26566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 34.7 bits (76), Expect = 0.062
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Frame = +1
Query: 217 QLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIIITGNEKAFAAGADIKEMQN-NTYS 393
QL A NAL + V L + V++ + A+I+ G+ F +G D+ ++ +T
Sbjct: 891 QLAGIAARNALTGHMMVRLAEVVDELEKWQAGKALILHGDAGTFVSGGDLSVLKEIHTPG 950
Query: 394 SNTKQGFL--REWEDISNCGKPIIAAVNGFALGGGCEL-------AMLCDIIYAGEK--A 540
+ + + + + +AA+ G A+GGG E + E +
Sbjct: 951 EGEQMCYFMHKTFARLQRLPLISLAAIQGLAIGGGAEAHTQGGAGGVNAPPHTTAESPFS 1010
Query: 541 KFGQPEI-----NIGTIPGAGGTQRLPRYVGKSK 627
+PEI +G PG GG RL + VG+ K
Sbjct: 1011 VLNRPEIKFVQARMGLTPGWGGGARLVQLVGRQK 1044
>SB_32164| Best HMM Match : ECH (HMM E-Value=0.02)
Length = 280
Score = 34.3 bits (75), Expect = 0.082
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +1
Query: 526 AGEKAKFGQPEINIGTIPGAGGTQRLPRYVGK 621
A EK F PE IG P GG LPR GK
Sbjct: 134 ATEKTTFAMPETAIGFFPDVGGAHALPRLSGK 165
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 193 SKKNVGLIQLNRPKALNALCKPL 261
+K N G+I +NRPKALNAL P+
Sbjct: 90 TKNNAGIITMNRPKALNALNLPM 112
>SB_12455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 400 TKQGFLREWEDISNCGKPIIAAVNGFAL 483
T++ LR ++DIS C + I VNGF++
Sbjct: 30 TRERLLRSYQDISECNRRIHGPVNGFSI 57
>SB_28781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 190 GSKKNVGLIQLNRPKALNALCKPLFVELGKAVNDFDADSNIAAIII 327
GS + + L NRP+A NA+ K +A+ DS + A+I+
Sbjct: 55 GSHEGIALFTFNRPEAKNAMSKNFLKLFLEALASVKHDSKVRAVIV 100
>SB_46122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +1
Query: 427 EDISNCGKPIIAAVNGFALGGGCELAMLCDIIYAGEKAKFGQPEINIGTIPGAGGTQR-L 603
+ I + KPI+A ++ A G G +L +CD++ ++A G P I++ + G
Sbjct: 581 QTIQHFPKPIVATISKPAHGLGAQLVAMCDMVC--DEASLGSP-IDVASAKANGIVPYCF 637
Query: 604 PRYVGKS 624
PR +G S
Sbjct: 638 PRLMGHS 644
>SB_1618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1371
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 537 LFAGIDDIAQHCQLTTTSKSETINSGNDGLPTVGDVLPFTKET 409
+F+G+ QH +T TI G G T + LP T ET
Sbjct: 781 VFSGLSIQKQHAVITIKDSEITIKPGTSGAKTKVNGLPLTGET 823
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -2
Query: 536 FSPA*MISHSIASSQPPPRAKPLTAAMMGFPQLEMSSHSRRKPCFVLL 393
F+ A + SH + SQP P + P A++ ++H KPCF L
Sbjct: 458 FNQALLHSHP-SPSQPSPVSHPPAQALLHTSHPSPATHPSPKPCFTFL 504
>SB_29302| Best HMM Match : LRR_1 (HMM E-Value=1.1e-11)
Length = 606
Score = 28.3 bits (60), Expect = 5.4
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -3
Query: 454 WASHSWRCPPIHEGNPVLCCCCMYCF 377
W + C + G CCCC +CF
Sbjct: 496 WCKALFFCCGVITGCYFCCCCCFFCF 521
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 57 CRYCNSCFAGKECTEQVQSGIRN-KPSIHKV 146
C YC++C GK+ + QS I N KP I V
Sbjct: 321 CDYCDACLKGKDKRLEFQSLIDNYKPDIVNV 351
>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -1
Query: 465 SGNDGLPTVGDVLPFTKET-LFCVAAVCIVLHLLNISTSRKRLLVTSDDDGSNVAVGVKI 289
S N G + + FT + +F + ++L+N + R+R + +D ++ GV +
Sbjct: 193 SDNYGRSLLDSMPHFTNLSGIFDSVNTLVSVYLINDAIDRRRNIKNYPEDPGDLG-GVGV 251
Query: 288 IDCLPEFDKQWF 253
C P + ++WF
Sbjct: 252 PYCNPHYSRKWF 263
>SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 526 HR*YRTALPAHNHLQERNH*QRQ*WASHSWRCPPIHEGNPV 404
H +R L L+ R+ + WA H+ R PP+ GN V
Sbjct: 1027 HPTWRDTLALREALRNRHMQASERWAEHTKRLPPLVVGNHV 1067
>SB_38336| Best HMM Match : UCR_TM (HMM E-Value=4.6)
Length = 165
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -2
Query: 215 MSPTFFLEPTTSTLMFSYDAVL*NFMDAWLVADTTLHLFSTFFPSKARVTVATEAI 48
++PT L+ TS YD+ L + WL+ + L F T++ ++T+A + +
Sbjct: 27 ITPTTPLDSWTSD-QSGYDSHLASTFSEWLMGFSFLLFFMTYYREFKKITIAIKVV 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,646,756
Number of Sequences: 59808
Number of extensions: 474443
Number of successful extensions: 1475
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1471
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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