Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e11
         (114 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    19   4.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    18   8.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    18   8.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    18   8.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +2

Query: 2   NNKIIYGLKIYY 37
           +NK+++G+  YY
Sbjct: 302 DNKLLFGVLAYY 313


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -3

Query: 112 FFLININYYLNK 77
           FF++N+ Y  N+
Sbjct: 278 FFIVNVLYICNQ 289


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 106 LININYYLNKLKINTKI 56
           ++ I+Y L KLK   +I
Sbjct: 289 ILGISYSLEKLKTGDEI 305


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 106 LININYYLNKLKINTKI 56
           ++ I+Y L KLK   +I
Sbjct: 289 ILGISYSLEKLKTGDEI 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,023
Number of Sequences: 336
Number of extensions: 134
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 18
effective length of database: 116,537
effective search space used:  2214203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)