Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10e10
(498 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 62 2e-10
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 8e-07
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 50 1e-06
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 46 2e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 44 7e-05
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 42 4e-04
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 38 0.006
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.008
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.019
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 34 0.057
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.057
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.70
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 30 0.92
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 30 0.92
SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11) 29 2.8
SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0) 27 6.5
SB_36384| Best HMM Match : Keratin_B2 (HMM E-Value=2.3) 27 8.6
SB_8898| Best HMM Match : WSC (HMM E-Value=6.4) 27 8.6
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 62.1 bits (144), Expect = 2e-10
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 184
HPE+ + D++++ ++ + F + GWG+T+ G+
Sbjct: 160 HPEYDDRKIKNDIALLELSRPVKFDREGKVGTACLTNQQPTPGKRCYITGWGSTIGTGN- 218
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 364
S L + L + + +C+ +Y G V + CAG R+G N D G P ++
Sbjct: 219 SPRILQQAMLPIASHNDCKNKYYG---VSSTAHLCAGEARSGASGGCNGDSGGPLVCEDN 275
Query: 365 ----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQ 460
L G VS+GK + Y V ++S+T+WI Q
Sbjct: 276 GRWYLHGAVSYGKLHCPTTYYTVFARVASYTDWIKQ 311
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 50.4 bits (115), Expect = 8e-07
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 4/154 (2%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 184
HP++++ D++++ + + F + GWG
Sbjct: 514 HPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCYITGWGAINGDTQQ 573
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 364
S L + L + + ENCR +Y V + CAG R+ N D G P ++
Sbjct: 574 SPDILQQAMLPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDN 630
Query: 365 ----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
L G VS+G N + V ++S+T+WI
Sbjct: 631 GSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 664
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 326 NTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
N D G P ++ L G VS+G N + V ++S+T+WI
Sbjct: 284 NGDSGGPLVCEDNGSWFLHGAVSYGLRNCPTTHYTVFARVASYTDWI 330
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +2
Query: 152 GWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNT 331
GWG +G + L + ++ + +++ C Q DR +T+N CAG+ R GG D
Sbjct: 351 GWGALQEGAGSTSKVLMQAKVPLVSRDQCSHQQSYGDR-ITENMLCAGM-RQGGVDSCQG 408
Query: 332 DLGAPAFFQN-------ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
D G P N LVG+ S+GK A + + ++ + WI
Sbjct: 409 DSGGPFVCTNPENPRQWTLVGVTSWGKGCARALKYGIYANVRRYLHWI 456
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 49.6 bits (113), Expect = 1e-06
Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 15/169 (8%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXX---DLLGWGTTVQG 175
HP +S ++YD D++++R+ + F + GWG
Sbjct: 199 HPHYSPDSYDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSGTISGWGKRKLW 258
Query: 176 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 355
LH+ + + + + CR+ + D +VT N FCAG + D D G P
Sbjct: 259 RDRVANRLHEATVPIVDIQTCRKAHP--DYIVTANMFCAGFENSSRGDACQGDSGGPFSV 316
Query: 356 QN------------ALVGIVSFGKSNANDIYPVVLTSISSFTEWILQNV 466
N L+G++S+G V T + +F +WIL +
Sbjct: 317 DNPLPATPKGQHRHVLLGVISWGDGCGKFGKYGVYTRLFNFIDWILNEI 365
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 45.6 bits (103), Expect = 2e-05
Identities = 32/154 (20%), Positives = 54/154 (35%), Gaps = 4/154 (2%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 184
H FS Y D++++++ L GWG V
Sbjct: 23 HSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSPGDVPPVGSKCWLTGWGRQVDSSGP 82
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN- 361
L + + + + E+C+ +Y + + CAG + D G P +
Sbjct: 83 LPDILQQARIPIASHEDCKRKYGSG--IYSYTHLCAGEAKPNAAGACQGDSGGPLVCERN 140
Query: 362 ---ALVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
L G+VSFG N V T +S++ +WI
Sbjct: 141 GQWTLYGVVSFGAGNCEVTSYTVYTKVSNYLDWI 174
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 5/160 (3%)
Frame = +2
Query: 5 HPEFS-EENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGS 181
HP+++ N+D DV+++++ + + + GWG + G
Sbjct: 188 HPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYISGWGHLQEAGH 247
Query: 182 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN 361
LH+ + + +++ C++ Y V+ CAG AGG D D G P +
Sbjct: 248 -GPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAG-YGAGGIDACQGDSGGPLVCKE 305
Query: 362 A----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVH 469
L+G +S+G A V + W+ +H
Sbjct: 306 GDVWYLMGAISWGVGCARGGRYGVYADMMDLKYWVQSTIH 345
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 41.5 bits (93), Expect = 4e-04
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLL-GWGTTVQGGS 181
+P F+E +Y D++++ + + P+ + GWG +G
Sbjct: 23 NPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGKNCFITGWGRVFEGSD 82
Query: 182 VSDGNLHKLELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDYDNTDLGAPAFFQ 358
++ L + EL+V + C ++ G V D + CAG GG D+ G P
Sbjct: 83 EAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQGDS---GGPLVCN 137
Query: 359 NA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
A L GIVS+G + + V T + ++ WI
Sbjct: 138 EAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 173
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 4/162 (2%)
Frame = +2
Query: 2 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGS 181
+H +S D D +++++T ++F + GWG+T GS
Sbjct: 376 SHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGS 433
Query: 182 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN 361
S L ++ L + N C Y R +T CAG + + D G P +
Sbjct: 434 PSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCER 492
Query: 362 A----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVH*Y 475
L+G+ S+G P V + + + +WI + Y
Sbjct: 493 GGRWFLMGLSSWGWV-CPQARPKVFSDVLAAMDWIREKTRYY 533
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 4/162 (2%)
Frame = +2
Query: 2 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGS 181
+H +S D D +++++T ++F + GWG+T GS
Sbjct: 625 SHANYSYNTVDYDYALLKLTRPLNF--TQYVQPVCLPDSDFPAGTLCYVTGWGSTNYRGS 682
Query: 182 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQN 361
S L ++ L + N C Y R +T CAG + + D G P +
Sbjct: 683 PSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCAG-TEGVAKAVCSGDSGGPLVCER 741
Query: 362 A----LVGIVSFGKSNANDIYPVVLTSISSFTEWILQNVH*Y 475
L+G+ S+G P V + + + +WI + Y
Sbjct: 742 GGRWFLMGLSSWGWV-CPQARPKVFSDVLAAMDWIREKTRYY 782
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 40.3 bits (90), Expect = 9e-04
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = +2
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 364
+ G L + L + CR+QY+ DR CAG R G N D G P + +
Sbjct: 632 TQGTLQQAMLPIAEHSLCRKQYRV-DRTAHP---CAGEARVGAAGGCNGDSGGPLVCEQS 687
Query: 365 ----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
L G VS+G Y V T +SS+ WI
Sbjct: 688 GVWVLHGAVSYGARWCPTDYYTVFTRVSSYVAWI 721
Score = 37.5 bits (83), Expect = 0.006
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = +2
Query: 212 LIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA----LVGIV 379
L + + ENCR +Y V + CAG R+ N D G P ++ L G V
Sbjct: 913 LPIASHENCRRKYGD---VSSTAHLCAGEARSDAAGGCNGDSGGPLVCEDNGSWFLHGAV 969
Query: 380 SFGKSNANDIYPVVLTSISSFTEWI 454
S+G + V ++S+T+WI
Sbjct: 970 SYGMKYCPTTHYTVFARVASYTDWI 994
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Frame = +2
Query: 2 NHPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXD--LLGWGTTVQG 175
+HP FS YD D++++R+ + +LGWG T
Sbjct: 1249 SHPRFSWRTYDSDIALIRLRWKANITEYVRPVCLPNGYQRRLVKPRAKGVMLGWGVTEN- 1307
Query: 176 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 355
L + + V N C++ Y+ VT N CAG + RD N D G F
Sbjct: 1308 -KRPSKTLKEAIVPVVNHNACKKAYENETWPVTSNMLCAG-YKNKSRDSCNRDSGGGFVF 1365
Query: 356 QNA 364
++
Sbjct: 1366 YDS 1368
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 4/154 (2%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 184
H +FS + DV+++++ + I + GWG V GG
Sbjct: 152 HKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRAQVGAQCFITGWGRLVGGGQP 211
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQNA 364
S+ L + L V + C + V + CAG + GG D+ G P
Sbjct: 212 SE-ILQQAMLPVASHSACDRKNSYLVPVEEKSMICAGGMGMGGCQGDS---GGPFVCNEG 267
Query: 365 ----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
L G VS+G+ + V +SSF +WI
Sbjct: 268 GRWVLRGAVSWGQPMCGTDHYTVFARVSSFIDWI 301
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 39.1 bits (87), Expect = 0.002
Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 5/156 (3%)
Frame = +2
Query: 2 NHPEF-SEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGG 178
NHP++ S + D++++R++ + GWGT GG
Sbjct: 709 NHPDYGSPKRSSNDIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWGTLSSGG 768
Query: 179 SVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFFQ 358
S + L++ + + + C Y G ++ + CAG GG D D G P Q
Sbjct: 769 SQPEA-LNQAVVPLRTRSECERSYPGK---ISADMICAGNPE-GGVDTCQGDSGGPLVCQ 823
Query: 359 NA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
+ L G+ S+G A V + +W+
Sbjct: 824 HGNQWFLTGVTSWGHGCAFAGKYGVYAGVQQLKQWV 859
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 37.5 bits (83), Expect = 0.006
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTD-NKFCAGLVRAGGRDY 322
+ GWG +G ++ L + EL+V + C ++ G V D + CAG GG
Sbjct: 531 IAGWGRVFEGSDEAEF-LQEAELVVASNAKC-DKKNGELLPVDDASMVCAGGPGRGGCQG 588
Query: 323 DNTDLGAPAFFQNA----LVGIVSFGKSNANDIYPVVLTSISSFTEWI 454
D+ G P A L GIVS+G + + V T + ++ WI
Sbjct: 589 DS---GGPLVCNEAGRWVLRGIVSWGSRECSTEFYTVFTRVINYMPWI 633
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 4/111 (3%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 325
+ GWG GG+ S L + + + + C + V+ CA + G D
Sbjct: 344 ITGWGRLHSGGA-SPEILQQAKTKLLSYAECTKNGSYEAAAVSSTMLCA---QVPGIDTC 399
Query: 326 NTDLGAPAFFQN----ALVGIVSFGKSNANDIYPVVLTSISSFTEWILQNV 466
D G P +N LVG+ S+G A+ YP + ++ +W+ ++
Sbjct: 400 QGDSGGPLVCENNNKWTLVGVTSWGYGCAHPDYPGIYAKLTELKDWVFHHM 450
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.9 bits (79), Expect = 0.019
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRV--------VTDNKFCAGLV 301
+ GWG + G ++ L + +L V + C E++ G + VT+ CAG
Sbjct: 158 ITGWGRSYYPGPTAN-KLQQADLRVVSNRACSERHMGSKNMRLENGTWRVTETMLCAGDA 216
Query: 302 RAGGRDYDNTDLGAPAFFQN-----ALVGIVSFGKSNANDI-YPVVLTSISSFTEWI 454
G++ N D G P +N L G+VS+G + + V +S WI
Sbjct: 217 GKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFARVSVLRHWI 273
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 34.3 bits (75), Expect = 0.057
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 325
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 78 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 132
Query: 326 NTDLGAP 346
D G P
Sbjct: 133 QGDSGGP 139
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 34.3 bits (75), Expect = 0.057
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYD 325
+ GWGT GG+ L + + + ++ C Y + D+ CAGL AGG D
Sbjct: 422 ITGWGTLASGGN-QPNKLMQASVPLVSQSKCNTAYPNK---IHDSMLCAGL-DAGGIDAC 476
Query: 326 NTDLGAP 346
D G P
Sbjct: 477 QGDSGGP 483
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 31.9 bits (69), Expect = 0.30
Identities = 24/108 (22%), Positives = 41/108 (37%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTTVQGGSV 184
H +FS + D++++++ + + GWG TV GGS
Sbjct: 110 HEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRTVGGGSA 169
Query: 185 SDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDN 328
+ G L + L V +C+ V + + CAG GG D+
Sbjct: 170 A-GILQQAMLPVAGDSDCQRTNGRLVPVDSRSMICAGGQGKGGCQGDS 216
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 31.1 bits (67), Expect = 0.53
Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 11/161 (6%)
Frame = +2
Query: 5 HPEFSEENYDKDVSIVRVTHAIHFGPNXXXXXXXXXXXXXXXXXXXDLLGWGTT---VQG 175
HP + + D DV+++R++H + GWG T G
Sbjct: 1411 HPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGESEAVGKNCYITGWGRTGYNRPG 1470
Query: 176 GSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDYDNTDLGAPAFF 355
SV L + + + +++ C + VVT C G D G P
Sbjct: 1471 ASV----LQEAMMPIVSQQTCAAAMRRWG-VVTSRMICGGFGAGSTISGCFGDSGGPFVC 1525
Query: 356 QNA-----LVGIVSFGK---SNANDIYPVVLTSISSFTEWI 454
Q + + G+VS+G S+ + Y V ++ F WI
Sbjct: 1526 QGSNKRWNIQGVVSWGTRTCSSGQNEY-TVYARVAQFVPWI 1565
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 30.7 bits (66), Expect = 0.70
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -2
Query: 350 RQGHPSQYCRSRGHQPGPNRR--RICYQSRRD 261
RQG P +YCRS Q GP RR R Y +R+
Sbjct: 338 RQGTPDEYCRSSVKQIGPFRRFERRGYSKKRN 369
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 30.3 bits (65), Expect = 0.92
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 371 LLAHFGRRQGHPSQYCRSRGHQPGPNRRRICYQSRRDHDPCTV 243
L+ H G R +PS+ C + P +++ YQS+ HD C +
Sbjct: 162 LICH-GCRGINPSKVCAACNGDFAPGEKKVGYQSKTFHDKCFI 203
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 30.3 bits (65), Expect = 0.92
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 146 LLGWGTTVQGGSVSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGG 313
++GWG TV GG ++ L + L V +C ++ RV + CAG RA G
Sbjct: 92 VVGWGRTVGGGQGAE-ILQQAMLPVAYDNHCMQRNNQLMRVDPVSMICAGGQRAAG 146
>SB_29023| Best HMM Match : Pentaxin (HMM E-Value=2.9e-11)
Length = 204
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +2
Query: 182 VSDGNLHKLELIVTNKENCREQYKGHDRVVTDNKFCAGLVRAGGRDY----DNTDLGAPA 349
++D H + +N E + Y + V + G +GG + + DLG
Sbjct: 78 IADSRFHSVVATWSNSEGEFQFYVDNSLVTKEKNLATGRTISGGGVFIIGNEQDDLGGGF 137
Query: 350 FFQNALVGIVS 382
F NALVG ++
Sbjct: 138 SFGNALVGTIT 148
>SB_33704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -2
Query: 416 RGRCHWHCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRRICY 276
R CH F+++ LLA F R+ HP + R H P R++C+
Sbjct: 249 RQMCHPLAPFRQMCYLLAPFRRQMCHPLAHFRQMCHPLAP-FRQMCH 294
>SB_35220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 27.9 bits (59), Expect = 4.9
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = -3
Query: 259 MTLVLFPAVFFVGHNEFELVEVAVRYTAALNGSSPSEQINKNTLGYYDTLLDNSTLLDVW 80
M +VLF A+F + EF ++ + + T + +GS + +N Y D +D T+L
Sbjct: 1 MAVVLF-ALFRL--LEFLMLVIFTKGTCSNSGSQQALHVNITCEKYLDVYVDGETMLTGV 57
Query: 79 AEVDGMCYSYDAHILVV 29
V + +H++ V
Sbjct: 58 QGVHSILIDSSSHVMAV 74
>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 937
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 318 SRPPARTKPAQNLLSVTTRS*P 253
+RPP KPA N LS T RS P
Sbjct: 594 ARPPPTAKPAVNRLSPTRRSLP 615
>SB_36384| Best HMM Match : Keratin_B2 (HMM E-Value=2.3)
Length = 199
Score = 27.1 bits (57), Expect = 8.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 147 RSTKIPWGITTPCWIIAPC 91
R T + W PCW+ PC
Sbjct: 137 RDTVLSWSPMIPCWVGTPC 155
>SB_8898| Best HMM Match : WSC (HMM E-Value=6.4)
Length = 165
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -2
Query: 419 LRGRCHW--HCSFQKIRCLLAHFGRRQGHPSQYCRSRGHQPGPNRRR----ICYQSRRDH 258
++ +CH+ HC + K C + ++ R + R + + P R R CY+ RD
Sbjct: 49 IKHKCHYKYHC-YLKCSCKVKYYHCRYRRRCVW-RYKYYHGKPRRYRHCYRYCYRRIRDA 106
Query: 257 DPCTVPCS 234
P PCS
Sbjct: 107 SPVYYPCS 114
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,144,354
Number of Sequences: 59808
Number of extensions: 402670
Number of successful extensions: 966
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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