SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e04
         (295 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020961-1|AAH20961.1|  495|Homo sapiens solute carrier family 1...    32   0.29 
AL590428-1|CAI15635.1|  495|Homo sapiens solute carrier family 1...    32   0.29 
AL121972-1|CAI20417.1|  495|Homo sapiens solute carrier family 1...    32   0.29 
AJ387747-1|CAB62540.1|  495|Homo sapiens sialin protein.               32   0.29 
AF244577-1|AAF97769.1|  536|Homo sapiens membrane glycoprotein H...    32   0.29 
BC069646-1|AAH69646.1|  582|Homo sapiens differentiation-associa...    31   0.51 
BC069640-1|AAH69640.1|  582|Homo sapiens solute carrier family 1...    31   0.51 
BC069629-1|AAH69629.1|  582|Homo sapiens solute carrier family 1...    31   0.51 
AB032435-1|BAA92874.1|  582|Homo sapiens differentiation-associa...    31   0.51 
BC072430-1|AAH72430.1|  272|Homo sapiens cholesterol 25-hydroxyl...    28   4.7  
BC059379-1|AAH59379.1|  560|Homo sapiens solute carrier family 1...    28   4.7  
BC017843-1|AAH17843.1|  272|Homo sapiens cholesterol 25-hydroxyl...    28   4.7  
AL513533-5|CAI13519.1|  272|Homo sapiens cholesterol 25-hydroxyl...    28   4.7  
AF059214-1|AAC97483.1|  272|Homo sapiens cholesterol 25-hydroxyl...    28   4.7  
AF059212-1|AAC97481.1|  272|Homo sapiens cholesterol 25-hydroxyl...    28   4.7  
AB032436-1|BAA92875.1|  560|Homo sapiens brain-specific Na-depen...    28   4.7  

>BC020961-1|AAH20961.1|  495|Homo sapiens solute carrier family 17
           (anion/sugar transporter), member 5 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 33  WQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 134
           WQ VF I  +        F +F KG VQ W  +D
Sbjct: 456 WQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489


>AL590428-1|CAI15635.1|  495|Homo sapiens solute carrier family 17
           (anion/sugar transporter), member 5 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 33  WQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 134
           WQ VF I  +        F +F KG VQ W  +D
Sbjct: 456 WQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489


>AL121972-1|CAI20417.1|  495|Homo sapiens solute carrier family 17
           (anion/sugar transporter), member 5 protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 33  WQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 134
           WQ VF I  +        F +F KG VQ W  +D
Sbjct: 456 WQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489


>AJ387747-1|CAB62540.1|  495|Homo sapiens sialin protein.
          Length = 495

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 33  WQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 134
           WQ VF I  +        F +F KG VQ W  +D
Sbjct: 456 WQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 489


>AF244577-1|AAF97769.1|  536|Homo sapiens membrane glycoprotein HP59
           protein.
          Length = 536

 Score = 32.3 bits (70), Expect = 0.29
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 33  WQIVFLITVSFQFITNAVFVIFVKGSVQPWNFHD 134
           WQ VF I  +        F +F KG VQ W  +D
Sbjct: 497 WQTVFYIAAAINVFGAIFFTLFAKGEVQNWALND 530


>BC069646-1|AAH69646.1|  582|Homo sapiens differentiation-associated
           Na-dependent inorganic phosphate cotr protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 18  KNPSR--WQIVFLITVSFQFITNAVFVIFVKGSVQPW 122
           KN SR  WQ VFLI     +     + IF  G  QPW
Sbjct: 469 KNKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505


>BC069640-1|AAH69640.1|  582|Homo sapiens solute carrier family 17
           (sodium-dependent inorganic phosphate cotransporter),
           protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 18  KNPSR--WQIVFLITVSFQFITNAVFVIFVKGSVQPW 122
           KN SR  WQ VFLI     +     + IF  G  QPW
Sbjct: 469 KNKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505


>BC069629-1|AAH69629.1|  582|Homo sapiens solute carrier family 17
           (sodium-dependent inorganic phosphate cotransporter),
           protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 18  KNPSR--WQIVFLITVSFQFITNAVFVIFVKGSVQPW 122
           KN SR  WQ VFLI     +     + IF  G  QPW
Sbjct: 469 KNKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505


>AB032435-1|BAA92874.1|  582|Homo sapiens differentiation-associated
           Na-dependent inorganic phosphate cotransporter protein.
          Length = 582

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +3

Query: 18  KNPSR--WQIVFLITVSFQFITNAVFVIFVKGSVQPW 122
           KN SR  WQ VFLI     +     + IF  G  QPW
Sbjct: 469 KNKSREEWQYVFLIAALVHYGGVIFYAIFASGEKQPW 505


>BC072430-1|AAH72430.1|  272|Homo sapiens cholesterol 25-hydroxylase
           protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 KVPWLHRPFHEYHEDS 81
           KVPWL+R FH+ H  +
Sbjct: 148 KVPWLYRTFHKVHHQN 163


>BC059379-1|AAH59379.1|  560|Homo sapiens solute carrier family 17
           (sodium-dependent inorganic phosphate cotransporter),
           protein.
          Length = 560

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = +3

Query: 18  KNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW---NFHDEERIG-TGVEELKSLND 182
           K    WQ VFLI     +     + +F  G  QPW       EE+ G  G ++L   +D
Sbjct: 463 KTREEWQYVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSDD 521


>BC017843-1|AAH17843.1|  272|Homo sapiens cholesterol 25-hydroxylase
           protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 KVPWLHRPFHEYHEDS 81
           KVPWL+R FH+ H  +
Sbjct: 148 KVPWLYRTFHKVHHQN 163


>AL513533-5|CAI13519.1|  272|Homo sapiens cholesterol 25-hydroxylase
           protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 KVPWLHRPFHEYHEDS 81
           KVPWL+R FH+ H  +
Sbjct: 148 KVPWLYRTFHKVHHQN 163


>AF059214-1|AAC97483.1|  272|Homo sapiens cholesterol 25-hydroxylase
           protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 KVPWLHRPFHEYHEDS 81
           KVPWL+R FH+ H  +
Sbjct: 148 KVPWLYRTFHKVHHQN 163


>AF059212-1|AAC97481.1|  272|Homo sapiens cholesterol 25-hydroxylase
           protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 128 KVPWLHRPFHEYHEDS 81
           KVPWL+R FH+ H  +
Sbjct: 148 KVPWLYRTFHKVHHQN 163


>AB032436-1|BAA92875.1|  560|Homo sapiens brain-specific
           Na-dependent inorganic phosphate cotransporter protein.
          Length = 560

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = +3

Query: 18  KNPSRWQIVFLITVSFQFITNAVFVIFVKGSVQPW---NFHDEERIG-TGVEELKSLND 182
           K    WQ VFLI     +     + +F  G  QPW       EE+ G  G ++L   +D
Sbjct: 463 KTREEWQYVFLIASLVHYGGVIFYGVFASGEKQPWAEPEEMSEEKCGFVGHDQLAGSDD 521


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,589,591
Number of Sequences: 237096
Number of extensions: 507889
Number of successful extensions: 1090
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -