Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10e03
(657 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024919-1|AAH24919.1| 289|Homo sapiens nucleotide binding prot... 149 9e-36
AK022722-1|BAB14203.1| 289|Homo sapiens protein ( Homo sapiens ... 149 9e-36
BC008005-1|AAH08005.1| 271|Homo sapiens nucleotide binding prot... 63 7e-10
BC002768-1|AAH02768.1| 271|Homo sapiens nucleotide binding prot... 63 7e-10
AL031724-1|CAC36077.1| 265|Homo sapiens C447E6.1 (nucleotide bi... 63 7e-10
AK001023-1|BAA91471.1| 271|Homo sapiens protein ( Homo sapiens ... 63 7e-10
AF118394-1|AAD45242.1| 271|Homo sapiens putative nucleotide bin... 63 7e-10
U01833-1|AAA61932.1| 320|Homo sapiens protein ( Human nucleotid... 58 4e-08
BC109323-1|AAI09324.1| 320|Homo sapiens nucleotide binding prot... 58 4e-08
BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding prot... 58 4e-08
BC100290-1|AAI00291.1| 309|Homo sapiens NUBP1 protein protein. 58 4e-08
AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding prot... 58 4e-08
U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged pr... 30 8.3
U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jag... 30 8.3
U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein. 30 8.3
U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jag... 30 8.3
BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille synd... 30 8.3
BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille synd... 30 8.3
BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille synd... 30 8.3
AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille synd... 30 8.3
AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein J... 30 8.3
AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein. 30 8.3
>BC024919-1|AAH24919.1| 289|Homo sapiens nucleotide binding
protein-like protein.
Length = 289
Score = 149 bits (361), Expect = 9e-36
Identities = 70/138 (50%), Positives = 89/138 (64%)
Frame = +3
Query: 243 IMDHRAKVMSKGLPEKKPLPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLL 422
+ R ++MS+GLP++KP+ GVK +I+ NLA A+ + K IGLL
Sbjct: 15 LKQRRTQIMSRGLPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLL 74
Query: 423 DADVFGPSVPLMMNISGEPMLNDDHLIEPLLNYGVKCMSMGLLVSGENAVVWRGLMVMQA 602
D DV+GPSVP MMN+ G P L+ +L+ PLLNYG+ CMSMG LV VVWRGLMVM A
Sbjct: 75 DVDVYGPSVPKMMNLKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSA 134
Query: 603 LERLTRHVAWGPLDCLVV 656
+E+L R V WG LD LVV
Sbjct: 135 IEKLLRQVDWGQLDYLVV 152
>AK022722-1|BAB14203.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ12660 fis, clone NT2RM4002174, moderately
similar to MRP PROTEIN. ).
Length = 289
Score = 149 bits (361), Expect = 9e-36
Identities = 70/138 (50%), Positives = 89/138 (64%)
Frame = +3
Query: 243 IMDHRAKVMSKGLPEKKPLPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLL 422
+ R ++MS+GLP++KP+ GVK +I+ NLA A+ + K IGLL
Sbjct: 15 LKQRRTQIMSRGLPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLL 74
Query: 423 DADVFGPSVPLMMNISGEPMLNDDHLIEPLLNYGVKCMSMGLLVSGENAVVWRGLMVMQA 602
D DV+GPSVP MMN+ G P L+ +L+ PLLNYG+ CMSMG LV VVWRGLMVM A
Sbjct: 75 DVDVYGPSVPKMMNLKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSA 134
Query: 603 LERLTRHVAWGPLDCLVV 656
+E+L R V WG LD LVV
Sbjct: 135 IEKLLRQVDWGQLDYLVV 152
>BC008005-1|AAH08005.1| 271|Homo sapiens nucleotide binding protein
2 (MinD homolog, E. coli) protein.
Length = 271
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 297 LPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGE 476
L GV+ IIL LA A++ K++G+LD D+ GPS+P M+ G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELALALR--HAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 477 PMLNDDHLIEPLL---NYGVKCMSMG-LLVSGENAVVWRGLMVMQALERLTRHVAWGPLD 644
+ D P+ + MS+G LL + AVVWRG +++ VAWG LD
Sbjct: 68 AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127
Query: 645 CLVV 656
LVV
Sbjct: 128 YLVV 131
>BC002768-1|AAH02768.1| 271|Homo sapiens nucleotide binding protein
2 (MinD homolog, E. coli) protein.
Length = 271
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 297 LPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGE 476
L GV+ IIL LA A++ K++G+LD D+ GPS+P M+ G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELALALR--HAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 477 PMLNDDHLIEPLL---NYGVKCMSMG-LLVSGENAVVWRGLMVMQALERLTRHVAWGPLD 644
+ D P+ + MS+G LL + AVVWRG +++ VAWG LD
Sbjct: 68 AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127
Query: 645 CLVV 656
LVV
Sbjct: 128 YLVV 131
>AL031724-1|CAC36077.1| 265|Homo sapiens C447E6.1 (nucleotide
binding protein 1 (E.coli MinD like) ) protein.
Length = 265
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 297 LPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGE 476
L GV+ IIL LA A++ K++G+LD D+ GPS+P M+ G
Sbjct: 4 LAGVRHIILVLSGKGGVGKSTISTELALALR--HAGKKVGILDVDLCGPSIPRMLGAQGR 61
Query: 477 PMLNDDHLIEPLL---NYGVKCMSMG-LLVSGENAVVWRGLMVMQALERLTRHVAWGPLD 644
+ D P+ + MS+G LL + AVVWRG +++ VAWG LD
Sbjct: 62 AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 121
Query: 645 CLVV 656
LVV
Sbjct: 122 YLVV 125
>AK001023-1|BAA91471.1| 271|Homo sapiens protein ( Homo sapiens
cDNA FLJ10161 fis, clone HEMBA1003555, moderately
similar to NUCLEOTIDE-BINDING PROTEIN. ).
Length = 271
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 297 LPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGE 476
L GV+ IIL LA A++ K++G+LD D+ GPS+P M+ G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELALALR--HAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 477 PMLNDDHLIEPLL---NYGVKCMSMG-LLVSGENAVVWRGLMVMQALERLTRHVAWGPLD 644
+ D P+ + MS+G LL + AVVWRG +++ VAWG LD
Sbjct: 68 AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127
Query: 645 CLVV 656
LVV
Sbjct: 128 YLVV 131
>AF118394-1|AAD45242.1| 271|Homo sapiens putative nucleotide
binding protein protein.
Length = 271
Score = 63.3 bits (147), Expect = 7e-10
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +3
Query: 297 LPGVKSIILXXXXXXXXXXXXXXXNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGE 476
L GV+ IIL LA A++ K++G+LD D+ GPS+P M+ G
Sbjct: 10 LAGVRHIILVLSGKGGVGKSTISTELALALR--HAGKKVGILDVDLCGPSIPRMLGAQGR 67
Query: 477 PMLNDDHLIEPLL---NYGVKCMSMG-LLVSGENAVVWRGLMVMQALERLTRHVAWGPLD 644
+ D P+ + MS+G LL + AVVWRG +++ VAWG LD
Sbjct: 68 AVHQCDRGWAPVFLDREQSISLMSVGFLLEKPDEAVVWRGPKKNALIKQFVSDVAWGELD 127
Query: 645 CLVV 656
LVV
Sbjct: 128 YLVV 131
>U01833-1|AAA61932.1| 320|Homo sapiens protein ( Human
nucleotide-binding protein mRNA, complete cds. ).
Length = 320
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 396 EPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLL---NYGVKCMSMGLLVSG-E 563
+ + +I LLD D+ GPS+P +M + GE + P+ N GV MS+G L+S +
Sbjct: 82 DENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGV--MSVGFLLSSPD 139
Query: 564 NAVVWRGLMVMQALERLTRHVAWGPLDCLVV 656
+AV+WRG +++ R V WG +D L+V
Sbjct: 140 DAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170
>BC109323-1|AAI09324.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) protein.
Length = 320
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 396 EPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLL---NYGVKCMSMGLLVSG-E 563
+ + +I LLD D+ GPS+P +M + GE + P+ N GV MS+G L+S +
Sbjct: 82 DENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGV--MSVGFLLSSPD 139
Query: 564 NAVVWRGLMVMQALERLTRHVAWGPLDCLVV 656
+AV+WRG +++ R V WG +D L+V
Sbjct: 140 DAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170
>BC109322-1|AAI09323.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) protein.
Length = 320
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 396 EPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLL---NYGVKCMSMGLLVSG-E 563
+ + +I LLD D+ GPS+P +M + GE + P+ N GV MS+G L+S +
Sbjct: 82 DENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGV--MSVGFLLSSPD 139
Query: 564 NAVVWRGLMVMQALERLTRHVAWGPLDCLVV 656
+AV+WRG +++ R V WG +D L+V
Sbjct: 140 DAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170
>BC100290-1|AAI00291.1| 309|Homo sapiens NUBP1 protein protein.
Length = 309
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +3
Query: 396 EPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLLNYGVKCMSMGLLVSG-ENAV 572
+ + +I LLD D+ GPS+P +M + GE + D N GV MS+G L+S ++AV
Sbjct: 82 DENTQIALLDIDICGPSIPKIMGLEGEQYVED--------NLGV--MSVGFLLSSPDDAV 131
Query: 573 VWRGLMVMQALERLTRHVAWGPLDCLVV 656
+WRG +++ R V WG +D L+V
Sbjct: 132 IWRGPKKNGMIKQFLRDVDWGEVDYLIV 159
>AK223204-1|BAD96924.1| 320|Homo sapiens nucleotide binding protein
1 (MinD homolog, E. coli) variant protein.
Length = 320
Score = 57.6 bits (133), Expect = 4e-08
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Frame = +3
Query: 396 EPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLL---NYGVKCMSMGLLVSG-E 563
+ + +I LLD D+ GPS+P +M + GE + P+ N GV MS+G L+S +
Sbjct: 82 DENTQIALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGV--MSVGFLLSSPD 139
Query: 564 NAVVWRGLMVMQALERLTRHVAWGPLDCLVV 656
+AV+WRG +++ R V WG +D L+V
Sbjct: 140 DAVIWRGPKKNGMIKQFLRDVDWGEVDYLIV 170
>U77914-1|AAC50909.1| 263|Homo sapiens soluble protein Jagged
protein.
Length = 263
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 37 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 74
>U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jagged
protein.
Length = 1214
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 766 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 803
>U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jagged
1 protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille
syndrome) protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein
Jagged 1 protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
>AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.
Length = 1218
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 344 CWKNYHSCKPSMCYESNRTGQGNRAPRC*CVWSFSTID 457
C +N + C P CY S G+ RC C F+ D
Sbjct: 779 CAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPD 816
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,882,241
Number of Sequences: 237096
Number of extensions: 2104349
Number of successful extensions: 3176
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3166
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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