Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10e03
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...    58   4e-09
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.      28   6.7  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = +3

Query: 369 NLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPL-LNYGVKCMSMG 545
           NLA A+   +P K++ +LD D+ GPS P MM +  E + N      P+ +   +  MS+ 
Sbjct: 78  NLARAL-ASDPSKQVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGIQPNLTLMSIA 136

Query: 546 LLVSGEN-AVVWRGLMVMQALERLTRHVAWGPLDCLVV 656
            L+  +N AV+WRG      +++  + V WG +D L++
Sbjct: 137 FLLGDKNDAVIWRGARKNGMIKQFLKDVDWGEVDYLLI 174


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 387 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 506
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 387 KVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIE 506
           K I+   ++GL+D DV  P VP M  +  + +L+   +IE
Sbjct: 529 KCIKDLNDLGLVDLDVSEPIVPFMETVIEDSVLSAPQIIE 568


>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
            R10E8.6 protein.
          Length = 1696

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +3

Query: 117  YQLNMTLQRRFLRFSSSYVFSTRMNTIAPCLQTVRFNHSKSDIMDHRAKVMSKGLPEK 290
            Y   + L R +LR  S YVF   + +  P   T+  N SK + ++ +  +   G P++
Sbjct: 917  YLKEVLLSRFYLRSHSYYVFQHLLGSPTPFKFTINDNRSKEEHVNAKNLLEEFGTPDR 974


>Z81493-1|CAB04039.1|  178|Caenorhabditis elegans Hypothetical
           protein F01D5.1 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 308 KEYHTCSFRERRCWKNYHSCKPSMCYESN 394
           K ++ CS RE+ C K+   C P  C + N
Sbjct: 136 KCFYKCSEREKYCAKSCGFCTPGTCKDCN 164


>Z79694-3|CAB01962.3|  594|Caenorhabditis elegans Hypothetical
           protein C15A11.3 protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 24  KNLQAAYIF*ARKDHVN*AHFTYLSLLYQNKYQLNMTLQRRFLRFSS 164
           +NL   YIF  R D V   HF Y  +  +   Q + T Q  ++ FS+
Sbjct: 460 RNLYCEYIFHGRNDQVVHIHFEYFDI--EGFNQCDETTQSDYILFSN 504


>AY387697-1|AAR26326.1|  594|Caenorhabditis elegans SOL-1 protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 24  KNLQAAYIF*ARKDHVN*AHFTYLSLLYQNKYQLNMTLQRRFLRFSS 164
           +NL   YIF  R D V   HF Y  +  +   Q + T Q  ++ FS+
Sbjct: 460 RNLYCEYIFHGRNDQVVHIHFEYFDI--EGFNQCDETTQSDYILFSN 504


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 610 RSSACITIKPRHTTAFSPDTNRPI 539
           ++SA  T  P HTTA  P T +P+
Sbjct: 542 QTSASPTTTPTHTTASQPTTTKPV 565


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,257,019
Number of Sequences: 27780
Number of extensions: 324184
Number of successful extensions: 654
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)