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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10d17
         (429 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g23720.1 68414.m02994 proline-rich extensin-like family prote...    29   1.8  
At5g44780.1 68418.m05488 expressed protein low similarity to SP|...    28   2.3  
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co...    28   2.3  
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL...    28   2.3  
At1g76010.1 68414.m08825 expressed protein                             28   2.3  
At1g72110.1 68414.m08335 expressed protein                             28   2.3  
At1g07310.1 68414.m00778 C2 domain-containing protein contains s...    28   3.1  
At1g31750.1 68414.m03895 proline-rich family protein contains pr...    27   4.1  
At2g37780.1 68415.m04639 DC1 domain-containing protein contains ...    27   5.4  
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex...    27   5.4  
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik...    27   5.4  
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,...    27   7.1  
At5g55540.1 68418.m06919 expressed protein                             27   7.1  
At3g27410.1 68416.m03426 expressed protein                             27   7.1  
At2g33520.1 68415.m04109 expressed protein                             27   7.1  
At2g32235.1 68415.m03939 expressed protein                             27   7.1  
At2g16270.1 68415.m01863 expressed protein  and genefinder; expr...    27   7.1  
At2g05540.1 68415.m00586 glycine-rich protein                          27   7.1  
At4g34440.1 68417.m04894 protein kinase family protein contains ...    26   9.4  
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ...    26   9.4  
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati...    26   9.4  

>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
           contains proline-rich extensin domains,
           INTERPRO:IPR002965
          Length = 895

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 166 PYIVN--PPKDYNPNGNG-YEPIDNGAYYVDPPQGRPYFKPTPFP 291
           PY+ N  PP  Y+P+    Y+       Y  PP   PY+ PTP P
Sbjct: 612 PYVYNSPPPPYYSPSPKPTYKSPPPPYVYSSPPP--PYYSPTPKP 654


>At5g44780.1 68418.m05488 expressed protein low similarity to
           SP|Q38732 DAG protein, chloroplast precursor
           {Antirrhinum majus}
          Length = 723

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +1

Query: 190 DYNP-NGNGYEPIDNGAYYVDPPQGR 264
           +Y+P NG  Y P   G +Y  PPQG+
Sbjct: 530 NYSPQNGGHYGPAQFGQWYPGPPQGQ 555


>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
           contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
           PF04815: Sec23/Sec24 helical domain and PF04810:
           Sec23/Sec24 zinc finger
          Length = 1096

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +1

Query: 124 NADSGNGYEPIDNRP-YIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 285
           NA    G  P+ + P + + PP ++     G  P+  G  Y  PPQ  P    TP
Sbjct: 257 NAGPFTGNSPLSSPPAHSIPPPTNFPGVPYGRPPMPGGFPYGAPPQQLPSAPGTP 311


>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
           (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
           (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
           {Arabidopsis thaliana}; contains Pfam profiles: PF00614
           phospholipase D.active site motif, PF00168 C2 domain
          Length = 1083

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 190 DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 291
           DY P+   Y+P  N   Y  PP    Y +P  +P
Sbjct: 101 DYQPSPYPYQPQGNFGAYGPPPPHYSYQEPAQYP 134


>At1g76010.1 68414.m08825 expressed protein
          Length = 350

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +1

Query: 130 DSGNGYE-PIDNRPYIVNPPKDYNPNGNG-YE-PIDNGAYYVDPPQG-RPYFKPTPFPGA 297
           D G GY+ P ++R Y      D  P G G Y+ P   G Y  D PQG R Y  P   P  
Sbjct: 220 DGGYGYDAPHEHRGYDDRGGYDAPPQGRGGYDGPQGRGGY--DGPQGRRGYDGP---PQG 274

Query: 298 RGG 306
           RGG
Sbjct: 275 RGG 277


>At1g72110.1 68414.m08335 expressed protein
          Length = 479

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 379 NSYEILKYIVNTLFRY*-FSKIFFTSHREHQGK 284
           N+  I++ I NTL  +  FS I  T H EH+GK
Sbjct: 41  NASTIVEGIKNTLINHPRFSSILVTGHGEHKGK 73


>At1g07310.1 68414.m00778 C2 domain-containing protein contains
           similarity to shock protein SRC2 [Glycine max]
           gi|2055230|dbj|BAA19769 ; contains Pfam profile
           PF00168:C2 domain
          Length = 352

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 181 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 291
           PP  + P     +P+D    Y   PQG  Y+ P+P P
Sbjct: 141 PPPQHPPPRPQSQPLD----YYSAPQGNHYYSPSPPP 173


>At1g31750.1 68414.m03895 proline-rich family protein contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 176

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 181 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 303
           PP+ Y P  +GY P    A Y  PP   P   P  +PG  G
Sbjct: 44  PPQGYPPPPHGYPP----AAYPPPPGAYP---PAGYPGPSG 77


>At2g37780.1 68415.m04639 DC1 domain-containing protein contains
           Pfam PF03107: DC1 domain
          Length = 286

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = +1

Query: 184 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFK----PTPFPGARGG 306
           P+ Y P G GY+P  N  YY     G P  +    P  +P   GG
Sbjct: 154 PEPYPPQGGGYQP-QNQNYYPYMNSGSPKTESIGHPETYPPQGGG 197


>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 826

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +1

Query: 178 NPPKDYN---PNGNGYEPIDNGAYYVDPPQGRP--YFKPTPFPGARG 303
           +PP +Y    P G    P ++  Y    P   P  Y++ TP P  RG
Sbjct: 766 SPPPEYQSPPPKGCNDSPSNDHHYQTPTPPSLPPPYYEDTPLPPIRG 812


>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
           protein, putative similar to cold-regulated gene SRC2
           [Glycine max] GI:2055230; contains Pfam profile PF00168:
           C2 domain; identical to cDNA  src2-like protein
           GI:3426059
          Length = 324

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = +1

Query: 181 PPKDYNPNGN--GYEPIDNGAYYVDPPQGRPYFKP 279
           PP  Y   G   GY P   G Y   PPQG PY  P
Sbjct: 217 PPGAYPQQGGYPGYPPQQQGGYPGYPPQG-PYGYP 250


>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           GI:3869280 from [Carica papaya]
          Length = 724

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 130 DSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 270
           D+ NGY   D +P  +N PK +  N  G+     GA    P +   Y
Sbjct: 231 DTCNGYYCEDFKPNSINKPKMWTENWTGWYTDFGGAVPYRPVEDIAY 277


>At5g55540.1 68418.m06919 expressed protein
          Length = 1380

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +1

Query: 145  YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 261
            Y  + N    +  P D NP  + + P+ N    VDP  G
Sbjct: 1086 YHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFG 1124


>At3g27410.1 68416.m03426 expressed protein
          Length = 132

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +1

Query: 55  FFMIFVLALLAMANAQDPVKVVENADSGNGYEPIDNRPYIVNPPK 189
           FF++F+  +L +AN        ++    +     DN+P + N  K
Sbjct: 5   FFLVFIFVILTVANGISAADSEKSQSPSSSKTLADNKPTVDNSTK 49


>At2g33520.1 68415.m04109 expressed protein 
          Length = 97

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +1

Query: 163 RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 270
           +P I  PP  Y P    Y+    G     PP  RPY
Sbjct: 21  QPIIEAPPPPYPPTRTRYQDYYGGYGQPHPPPLRPY 56


>At2g32235.1 68415.m03939 expressed protein
          Length = 310

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 106 PVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGR-PYFK 276
           PVK   + +S  G EP   + +I  P ++ +PN  GY  I       +P Q R P +K
Sbjct: 74  PVKR-PSPESKQGDEPRRKKLFIPRPEEEEDPNLMGYSKIPLPVVEFNPTQIRSPLYK 130


>At2g16270.1 68415.m01863 expressed protein  and genefinder;
           expression supported by MPSS
          Length = 759

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 18/64 (28%), Positives = 27/64 (42%)
 Frame = +2

Query: 128 LTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVG 307
           L   T + L+ ++     +PK  T    A NL       WTL ++ L     L   L  G
Sbjct: 325 LVSATFSPLMKSSFNEFHIPKEITEFAKANNLDQLSDKLWTLTESSLVYMDKLISRLGRG 384

Query: 308 SKEY 319
           ++EY
Sbjct: 385 NEEY 388


>At2g05540.1 68415.m00586 glycine-rich protein
          Length = 135

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
 Frame = +1

Query: 94  NAQDPVKVVENADS--GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNG 234
           N +D VK  E      G GY       Y  NP   Y   G GY   D G
Sbjct: 36  NERDEVKQTEQFGGFPGGGYGGFPGGGYGGNPGGGYGNRGGGYRNRDGG 84


>At4g34440.1 68417.m04894 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 670

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +1

Query: 175 VNPPKDYNPNGNGYEPIDNGAYYVDPPQ 258
           VN    YN N  G  P  NG YY   PQ
Sbjct: 222 VNHMHYYNNNPYGGAPSGNGGYYKGTPQ 249


>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
           contains Pfam profile: PF00096 zinc finger, C2H2 type
          Length = 214

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +1

Query: 145 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGAR 300
           +EP  + P I NP    NPN +          +++P       K TPFP AR
Sbjct: 86  FEPHHHTP-IANP----NPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSAR 132


>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
           identical to peroxiredoxin (Rehydrin homolog)
           [Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
           profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
           and thiol-specific antioxidant) family
          Length = 216

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 160 NRPYIVNPPKDYNPNGNGYEPIDNG 234
           N P I +P K+  P  N  +PI+NG
Sbjct: 95  NYPIIADPNKEIIPQLNMIDPIENG 119


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,939,265
Number of Sequences: 28952
Number of extensions: 203749
Number of successful extensions: 620
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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