BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmmt10d17 (429 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 29 1.8 At5g44780.1 68418.m05488 expressed protein low similarity to SP|... 28 2.3 At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 28 2.3 At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 28 2.3 At1g76010.1 68414.m08825 expressed protein 28 2.3 At1g72110.1 68414.m08335 expressed protein 28 2.3 At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 28 3.1 At1g31750.1 68414.m03895 proline-rich family protein contains pr... 27 4.1 At2g37780.1 68415.m04639 DC1 domain-containing protein contains ... 27 5.4 At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 5.4 At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 27 5.4 At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 27 7.1 At5g55540.1 68418.m06919 expressed protein 27 7.1 At3g27410.1 68416.m03426 expressed protein 27 7.1 At2g33520.1 68415.m04109 expressed protein 27 7.1 At2g32235.1 68415.m03939 expressed protein 27 7.1 At2g16270.1 68415.m01863 expressed protein and genefinder; expr... 27 7.1 At2g05540.1 68415.m00586 glycine-rich protein 27 7.1 At4g34440.1 68417.m04894 protein kinase family protein contains ... 26 9.4 At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 26 9.4 At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 26 9.4 >At1g23720.1 68414.m02994 proline-rich extensin-like family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 895 Score = 28.7 bits (61), Expect = 1.8 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = +1 Query: 166 PYIVN--PPKDYNPNGNG-YEPIDNGAYYVDPPQGRPYFKPTPFP 291 PY+ N PP Y+P+ Y+ Y PP PY+ PTP P Sbjct: 612 PYVYNSPPPPYYSPSPKPTYKSPPPPYVYSSPPP--PYYSPTPKP 654 >At5g44780.1 68418.m05488 expressed protein low similarity to SP|Q38732 DAG protein, chloroplast precursor {Antirrhinum majus} Length = 723 Score = 28.3 bits (60), Expect = 2.3 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = +1 Query: 190 DYNP-NGNGYEPIDNGAYYVDPPQGR 264 +Y+P NG Y P G +Y PPQG+ Sbjct: 530 NYSPQNGGHYGPAQFGQWYPGPPQGQ 555 >At3g44340.1 68416.m04764 sec23/sec24 transport family protein contains Pfam domains PF04811: Sec23/Sec24 trunk domain, PF04815: Sec23/Sec24 helical domain and PF04810: Sec23/Sec24 zinc finger Length = 1096 Score = 28.3 bits (60), Expect = 2.3 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%) Frame = +1 Query: 124 NADSGNGYEPIDNRP-YIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 285 NA G P+ + P + + PP ++ G P+ G Y PPQ P TP Sbjct: 257 NAGPFTGNSPLSSPPAHSIPPPTNFPGVPYGRPPMPGGFPYGAPPQQLPSAPGTP 311 >At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PLDBETA1) identical to SP|P93733 Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta) {Arabidopsis thaliana}; contains Pfam profiles: PF00614 phospholipase D.active site motif, PF00168 C2 domain Length = 1083 Score = 28.3 bits (60), Expect = 2.3 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +1 Query: 190 DYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 291 DY P+ Y+P N Y PP Y +P +P Sbjct: 101 DYQPSPYPYQPQGNFGAYGPPPPHYSYQEPAQYP 134 >At1g76010.1 68414.m08825 expressed protein Length = 350 Score = 28.3 bits (60), Expect = 2.3 Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 130 DSGNGYE-PIDNRPYIVNPPKDYNPNGNG-YE-PIDNGAYYVDPPQG-RPYFKPTPFPGA 297 D G GY+ P ++R Y D P G G Y+ P G Y D PQG R Y P P Sbjct: 220 DGGYGYDAPHEHRGYDDRGGYDAPPQGRGGYDGPQGRGGY--DGPQGRRGYDGP---PQG 274 Query: 298 RGG 306 RGG Sbjct: 275 RGG 277 >At1g72110.1 68414.m08335 expressed protein Length = 479 Score = 28.3 bits (60), Expect = 2.3 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = -3 Query: 379 NSYEILKYIVNTLFRY*-FSKIFFTSHREHQGK 284 N+ I++ I NTL + FS I T H EH+GK Sbjct: 41 NASTIVEGIKNTLINHPRFSSILVTGHGEHKGK 73 >At1g07310.1 68414.m00778 C2 domain-containing protein contains similarity to shock protein SRC2 [Glycine max] gi|2055230|dbj|BAA19769 ; contains Pfam profile PF00168:C2 domain Length = 352 Score = 27.9 bits (59), Expect = 3.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +1 Query: 181 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 291 PP + P +P+D Y PQG Y+ P+P P Sbjct: 141 PPPQHPPPRPQSQPLD----YYSAPQGNHYYSPSPPP 173 >At1g31750.1 68414.m03895 proline-rich family protein contains proline rich extensin domains, INTERPRO:IPR002965 Length = 176 Score = 27.5 bits (58), Expect = 4.1 Identities = 16/41 (39%), Positives = 19/41 (46%) Frame = +1 Query: 181 PPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 303 PP+ Y P +GY P A Y PP P P +PG G Sbjct: 44 PPQGYPPPPHGYPP----AAYPPPPGAYP---PAGYPGPSG 77 >At2g37780.1 68415.m04639 DC1 domain-containing protein contains Pfam PF03107: DC1 domain Length = 286 Score = 27.1 bits (57), Expect = 5.4 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Frame = +1 Query: 184 PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFK----PTPFPGARGG 306 P+ Y P G GY+P N YY G P + P +P GG Sbjct: 154 PEPYPPQGGGYQP-QNQNYYPYMNSGSPKTESIGHPETYPPQGGG 197 >At1g62440.1 68414.m07044 leucine-rich repeat family protein / extensin family protein similar to extensin-like protein [Lycopersicon esculentum] gi|5917664|gb|AAD55979; contains leucine-rich repeats, Pfam:PF00560; contains proline rich extensin domains, INTERPRO:IPR002965 Length = 826 Score = 27.1 bits (57), Expect = 5.4 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = +1 Query: 178 NPPKDYN---PNGNGYEPIDNGAYYVDPPQGRP--YFKPTPFPGARG 303 +PP +Y P G P ++ Y P P Y++ TP P RG Sbjct: 766 SPPPEYQSPPPKGCNDSPSNDHHYQTPTPPSLPPPYYEDTPLPPIRG 812 >At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like protein, putative similar to cold-regulated gene SRC2 [Glycine max] GI:2055230; contains Pfam profile PF00168: C2 domain; identical to cDNA src2-like protein GI:3426059 Length = 324 Score = 27.1 bits (57), Expect = 5.4 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%) Frame = +1 Query: 181 PPKDYNPNGN--GYEPIDNGAYYVDPPQGRPYFKP 279 PP Y G GY P G Y PPQG PY P Sbjct: 217 PPGAYPQQGGYPGYPPQQQGGYPGYPPQG-PYGYP 250 >At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase, putative similar to beta-galactosidase precursor GI:3869280 from [Carica papaya] Length = 724 Score = 26.6 bits (56), Expect = 7.1 Identities = 15/47 (31%), Positives = 21/47 (44%) Frame = +1 Query: 130 DSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 270 D+ NGY D +P +N PK + N G+ GA P + Y Sbjct: 231 DTCNGYYCEDFKPNSINKPKMWTENWTGWYTDFGGAVPYRPVEDIAY 277 >At5g55540.1 68418.m06919 expressed protein Length = 1380 Score = 26.6 bits (56), Expect = 7.1 Identities = 12/39 (30%), Positives = 17/39 (43%) Frame = +1 Query: 145 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 261 Y + N + P D NP + + P+ N VDP G Sbjct: 1086 YHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFG 1124 >At3g27410.1 68416.m03426 expressed protein Length = 132 Score = 26.6 bits (56), Expect = 7.1 Identities = 11/45 (24%), Positives = 21/45 (46%) Frame = +1 Query: 55 FFMIFVLALLAMANAQDPVKVVENADSGNGYEPIDNRPYIVNPPK 189 FF++F+ +L +AN ++ + DN+P + N K Sbjct: 5 FFLVFIFVILTVANGISAADSEKSQSPSSSKTLADNKPTVDNSTK 49 >At2g33520.1 68415.m04109 expressed protein Length = 97 Score = 26.6 bits (56), Expect = 7.1 Identities = 13/36 (36%), Positives = 15/36 (41%) Frame = +1 Query: 163 RPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPY 270 +P I PP Y P Y+ G PP RPY Sbjct: 21 QPIIEAPPPPYPPTRTRYQDYYGGYGQPHPPPLRPY 56 >At2g32235.1 68415.m03939 expressed protein Length = 310 Score = 26.6 bits (56), Expect = 7.1 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%) Frame = +1 Query: 106 PVKVVENADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGR-PYFK 276 PVK + +S G EP + +I P ++ +PN GY I +P Q R P +K Sbjct: 74 PVKR-PSPESKQGDEPRRKKLFIPRPEEEEDPNLMGYSKIPLPVVEFNPTQIRSPLYK 130 >At2g16270.1 68415.m01863 expressed protein and genefinder; expression supported by MPSS Length = 759 Score = 26.6 bits (56), Expect = 7.1 Identities = 18/64 (28%), Positives = 27/64 (42%) Frame = +2 Query: 128 LTQETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVG 307 L T + L+ ++ +PK T A NL WTL ++ L L L G Sbjct: 325 LVSATFSPLMKSSFNEFHIPKEITEFAKANNLDQLSDKLWTLTESSLVYMDKLISRLGRG 384 Query: 308 SKEY 319 ++EY Sbjct: 385 NEEY 388 >At2g05540.1 68415.m00586 glycine-rich protein Length = 135 Score = 26.6 bits (56), Expect = 7.1 Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%) Frame = +1 Query: 94 NAQDPVKVVENADS--GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNG 234 N +D VK E G GY Y NP Y G GY D G Sbjct: 36 NERDEVKQTEQFGGFPGGGYGGFPGGGYGGNPGGGYGNRGGGYRNRDGG 84 >At4g34440.1 68417.m04894 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 670 Score = 26.2 bits (55), Expect = 9.4 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +1 Query: 175 VNPPKDYNPNGNGYEPIDNGAYYVDPPQ 258 VN YN N G P NG YY PQ Sbjct: 222 VNHMHYYNNNPYGGAPSGNGGYYKGTPQ 249 >At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 214 Score = 26.2 bits (55), Expect = 9.4 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +1 Query: 145 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGAR 300 +EP + P I NP NPN + +++P K TPFP AR Sbjct: 86 FEPHHHTP-IANP----NPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSAR 132 >At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative identical to peroxiredoxin (Rehydrin homolog) [Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase and thiol-specific antioxidant) family Length = 216 Score = 26.2 bits (55), Expect = 9.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = +1 Query: 160 NRPYIVNPPKDYNPNGNGYEPIDNG 234 N P I +P K+ P N +PI+NG Sbjct: 95 NYPIIADPNKEIIPQLNMIDPIENG 119 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,939,265 Number of Sequences: 28952 Number of extensions: 203749 Number of successful extensions: 620 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 617 length of database: 12,070,560 effective HSP length: 74 effective length of database: 9,928,112 effective search space used: 675111616 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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