BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmmt10d14 (610 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 25 1.4 AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical prote... 24 3.3 AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosens... 24 3.3 DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 23 5.8 AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 5.8 AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transpo... 23 7.7 >AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit protein. Length = 837 Score = 25.4 bits (53), Expect = 1.4 Identities = 9/16 (56%), Positives = 9/16 (56%) Frame = -1 Query: 139 CPCHGAISSGTCLCTV 92 C HG GTC CTV Sbjct: 645 CSGHGTCECGTCRCTV 660 >AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical protein protein. Length = 191 Score = 24.2 bits (50), Expect = 3.3 Identities = 9/28 (32%), Positives = 17/28 (60%) Frame = -1 Query: 520 HFTNCL*NTTPCPSQQTEVRASNSEALR 437 ++ +CL + PCP + +++ EALR Sbjct: 49 NYVDCLLSRKPCPPEGKDLKRILPEALR 76 >AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosensory protein CSP5 protein. Length = 191 Score = 24.2 bits (50), Expect = 3.3 Identities = 9/28 (32%), Positives = 17/28 (60%) Frame = -1 Query: 520 HFTNCL*NTTPCPSQQTEVRASNSEALR 437 ++ +CL + PCP + +++ EALR Sbjct: 49 NYVDCLLSRKPCPPEGKDLKRILPEALR 76 >DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosyltransferase 2 protein. Length = 451 Score = 23.4 bits (48), Expect = 5.8 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = -2 Query: 597 FIKFYTNNTNYRISRKNTLI*FLFDFTSQIVCRTQ 493 FI Y + YRI + +I F D T C+++ Sbjct: 401 FIGTYESTFTYRIYEEREIIGFPKDLTFNTFCKSE 435 >AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing protein I protein. Length = 1340 Score = 23.4 bits (48), Expect = 5.8 Identities = 13/50 (26%), Positives = 19/50 (38%) Frame = -1 Query: 484 PSQQTEVRASNSEALRGFYLQRSYHTSRRELQNFIPARLHEPFKALHLQK 335 PS+ TE N A+ GF+ + +I L P K L + Sbjct: 391 PSEGTEQLGINFNAVDGFFFYEDVNKVETVTDAYIKLELKSPIKRNKLMR 440 >AF543192-1|AAN40409.1| 636|Anopheles gambiae amino acid transporter Ag_AAT8 protein. Length = 636 Score = 23.0 bits (47), Expect = 7.7 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 432 STYREATIHLVVSFKTSFLLGC 367 + YR+ATI + TS L GC Sbjct: 357 NVYRDATIVTSIDTFTSLLAGC 378 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 557,867 Number of Sequences: 2352 Number of extensions: 8954 Number of successful extensions: 22 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 59291487 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -