Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10d10
(706 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 34 0.098
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 31 0.91
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 31 1.2
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 30 2.1
SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25) 29 2.8
SB_58244| Best HMM Match : MpPF26 (HMM E-Value=9.9) 29 3.7
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_793| Best HMM Match : GHMP_kinases (HMM E-Value=0.0037) 29 3.7
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 29 4.9
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_331| Best HMM Match : F5_F8_type_C (HMM E-Value=0.034) 28 6.4
SB_55582| Best HMM Match : GHMP_kinases (HMM E-Value=4.9e-32) 28 6.4
SB_28330| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0) 28 8.5
SB_26698| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1) 28 8.5
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 28 8.5
SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07) 28 8.5
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 34.3 bits (75), Expect = 0.098
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Frame = -1
Query: 592 STKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LAHS 413
ST T V+P ++V+ T++A P + TT+ T + + P I A
Sbjct: 1730 STAATESTVAPETTVSQETTVAPETTVPTETTAAPETTLEPEITVAPETTVAPEITAAPD 1789
Query: 412 GWPGRNSALMVAGKLASNSSPDANTVITRQTSVL----LYDPTTTVRNGIATGRTKPSQ* 245
+ + +A S+ T ++ +T+ + L TT ++ A T +
Sbjct: 1790 TTLAPETTFKLESTVAPESTVSPETTVSPETTAVPETTLSPGTTVAQDTTAAPETTVAPE 1849
Query: 244 STCSPMRLTRPGAAAA 197
+T SP + P A
Sbjct: 1850 TTVSPETIAEPETTVA 1865
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 31.1 bits (67), Expect = 0.91
Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 2/181 (1%)
Frame = -1
Query: 541 ATSMAALLETPEPIGTSDTTTISK-PFTFIGKLAITPLI*LAHSGWPGRNSALMVAGKLA 365
A S +AL P+ G+ + PF+F ++ T +A +G PG + +
Sbjct: 2133 AGSTSALPSFPKVEGSKGSEAAKPAPFSFGAGVSSTAGAGVASTGIPGNAAPTSSVAPFS 2192
Query: 364 SNSSPDANTVITRQTSVLLYDPTTTVRN-GIATGRTKPSQ*STCSPMRLTRPGAAAATSG 188
+ T + P+T + +G P T + + P + A
Sbjct: 2193 FTGTSTTTAAATGIQAPAAAAPSTASKPFQFGSGAVSPFTFGTATGSSTSVPQSIATAPF 2252
Query: 187 RLPYATMNLSVACRNNTPSPFGIASQFIILTQNIYISFVITIPLSTERTATASLTSSYHA 8
AT +TP FG A+ ++ + F P + +TAS S
Sbjct: 2253 VFGAATTTAEALTSTSTPFAFGAATTTAAISTSTSTPFAFGAPATAAAVSTASSAPSAFV 2312
Query: 7 F 5
F
Sbjct: 2313 F 2313
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Frame = -1
Query: 592 STKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LAHS 413
ST T V+P ++V+ T++A P + TT++ TF + + P
Sbjct: 270 STAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTVVP------E 323
Query: 412 GWPGRNSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTV-RNGIATGRTKPSQ*STC 236
P + A+ S+ T ++++T+V P TTV T P+ +T
Sbjct: 324 TTPALETTSAPESTAATESTVAPETTVSQETTVA---PETTVPTETTVVPETTPALETTS 380
Query: 235 SPMRLTRPGAAAATSGRLP 179
+P + A +P
Sbjct: 381 APESTAATESTVAPETTVP 399
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 4/145 (2%)
Frame = -1
Query: 592 STKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LAHS 413
ST T V+P ++V+ T++A P + TT++ TF + + P A
Sbjct: 2332 STAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPEITFAPETTLPPETTAAPD 2391
Query: 412 GWPGRNSALMVAGKLASNSSPDANTVITRQTSV----LLYDPTTTVRNGIATGRTKPSQ* 245
+ + + LA S+ T + +++V + TT A +
Sbjct: 2392 TTLAPETTVALESTLALESTVAPETTVAPESTVAPESTVATETTVAPETTAAPEITAAPD 2451
Query: 244 STCSPMRLTRPGAAAATSGRLPYAT 170
+T +P P A +P T
Sbjct: 2452 TTVAPETTVAPETTVAPESTVPPET 2476
Score = 28.7 bits (61), Expect = 4.9
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 4/138 (2%)
Frame = -1
Query: 592 STKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LAHS 413
ST T V+P ++V+ T++A P + TT++ TF + + P A
Sbjct: 1438 STAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPDITFAPETTVPPETTGAPD 1497
Query: 412 GWPGRNSALMVAGKLASNSSPDANTVITRQTSV----LLYDPTTTVRNGIATGRTKPSQ* 245
+ + + LA S+ T + +++V + TT A + +
Sbjct: 1498 TTLAPETTVSLESTLALESTVAPETTMAPESTVPPESTVATETTVAPETTAAPESTLAPD 1557
Query: 244 STCSPMRLTRPGAAAATS 191
T +P RP A AT+
Sbjct: 1558 ITAAPDTTMRPLMAPATT 1575
Score = 27.9 bits (59), Expect = 8.5
Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Frame = -1
Query: 592 STKLTILPVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LAHS 413
ST T V+P ++V+ T++A P + TT++ TF + + P A
Sbjct: 369 STAATESTVAPETTVSQETTVAPETTVPTETTAAPETTVAPDITFAPETTVPPETTGAPD 428
Query: 412 GWPGRNSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ*STCS 233
+ + + LA S+ T + +++V P +TV AT T + +T +
Sbjct: 429 TTLAPETTVSLESTLALESTVAPETTMAPESTV---PPESTV----ATETTVAPE-TTAA 480
Query: 232 PMRLTRPG-AAAATSGRLPYATMNL 161
P P AA + +P +T+ L
Sbjct: 481 PESTLAPEITAAPDTTMVPKSTVAL 505
>SB_7171| Best HMM Match : Nodulin_late (HMM E-Value=0.25)
Length = 472
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +1
Query: 271 WQYRSLPSS-WDRTTTQM--SVA*SQCWRPVR--SWRPVSLLPSRQ 393
W ++S ++ W + SV CWRPVR + RPVS LP ++
Sbjct: 24 WSFKSARAALWKERVRAVLQSVRTQPCWRPVRPANCRPVSRLPEQR 69
>SB_58244| Best HMM Match : MpPF26 (HMM E-Value=9.9)
Length = 125
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -1
Query: 142 NTPSPFGIASQFIILTQNIYISF-VITI 62
N PSPF I + FII+T I I+F VITI
Sbjct: 29 NLPSPF-IITMFIIITTTIIITFLVITI 55
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 274 ATGRTKPSQ*STCSPMRLTRPGAAAATSGRLPYATMNLSVACRNNTPSP 128
++G P++ T SP R+T P A++ +GR A +S A R P+P
Sbjct: 504 SSGGASPAR--TTSPARITSPARASSPAGRASPA-RGVSPASRGKRPAP 549
>SB_793| Best HMM Match : GHMP_kinases (HMM E-Value=0.0037)
Length = 284
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Frame = +3
Query: 414 EWANYI----KGVIANFPI-KVNGFDIVVVSDVPMGSGVSSSAAI 533
EW +Y KG++ PI G +++V +VP +G+SSS+A+
Sbjct: 31 EWYHYFLCGYKGIVDRVPILDPVGMNVLVDGNVPNSAGLSSSSAL 75
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 4.9
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Frame = -1
Query: 592 STKLTILPVSPSSSV--NTATSMAALLETPEPIGTSDTTTISKPFTFIGKLAITPLI*LA 419
S+ L + SSS+ + + ++ + P+ + TT + + + P
Sbjct: 444 SSSLVVESGQTSSSLVAESGQTSSSFVAEPKAVSVLATTVTQTSASATSTIILVPSPSQT 503
Query: 418 HSGWPGRNSALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ*ST 239
HS RN LAS S D+N V V+ +PT + + R +
Sbjct: 504 HS----RNDTFSATQTLASVSGYDSNAVTVTNNQVMSSEPTQAPTSSVHQARRRRRDFKG 559
Query: 238 CSPMRLTRPGAAAATSGRLPYATMNLS 158
+ L+ + AT+ L A+ + S
Sbjct: 560 SRAISLSSQEHSVATTTTLQSASSSSS 586
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 28.7 bits (61), Expect = 4.9
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = -1
Query: 571 PVSPSSSVNTATSMAALLETPEP-IGTSDTTTISKPFTFIGKLAITPLI*LAHSGWPGRN 395
P+S S + + + AL TP P TS TT ++ T I +P+ H+
Sbjct: 5 PISTSIDIYSGWTTIALATTPSPQAQTSSTTGLT---TSIQPQTSSPIF---HTTSTRPQ 58
Query: 394 SALMVAGKLASNSSPDANTVITRQTSVLLYDPTTTVRNGIATGRTKPSQ*STCSPMRLTR 215
+ V + + P ++ I TS P T+ G T TKP + S P T+
Sbjct: 59 TTTTVGSTIL--TQPQTSSAICHTTST---QPHTSSAVGHTTS-TKPQKSSPIGPTTSTQ 112
Query: 214 PGAAAA---TSGRLPY--ATMNLSVACRNNTPSPFG 122
P ++ T+ P +T+ + + + T SP G
Sbjct: 113 PQTSSTVGHTTSTQPQTSSTVGHTTSTKPQTSSPIG 148
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +3
Query: 522 SAAIEVAVF---TLLEGLTGRMVSLVEKAKLCQKAE 620
S AI+ VF L G+T + V EKAKLC A+
Sbjct: 196 SCAIKCFVFQNLAKLRGITWKFVDYAEKAKLCASAQ 231
>SB_331| Best HMM Match : F5_F8_type_C (HMM E-Value=0.034)
Length = 302
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 551 REYCHFNGGAAGNTRTHRHVGYDNNI 474
R H + G G TRT RH GY+ +I
Sbjct: 189 RRVQHAHCGTQGTTRTLRHAGYNTHI 214
>SB_55582| Best HMM Match : GHMP_kinases (HMM E-Value=4.9e-32)
Length = 307
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 468 GFDIVVVSDVPMGSGVSSSAAIEVAVFTLLEGLTGRMVSLVEKAKLCQKAE 620
GF+I + ++ GSG+ SSAA + L G +L E + E
Sbjct: 78 GFEIEIYKNIKPGSGIGSSAASAAGAVYGVNKLLGEPFALQELVPFAMQGE 128
>SB_28330| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 488 IRRADGFWCFQQRRH*SGSIHAAR 559
I R+ G WC +QRRH H R
Sbjct: 15 IPRSHGSWCQRQRRHKGARAHGTR 38
>SB_24224| Best HMM Match : Lectin_C (HMM E-Value=0)
Length = 2726
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -1
Query: 571 PVSPSSSVNTATSMAALLETPEPIGTSDTTTISKPFT 461
P+SPSSS NT+ S + + +S T KPF+
Sbjct: 761 PLSPSSSDNTSVSSSPESSLEQGTSSSQLVTDRKPFS 797
>SB_26698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 133 SPFGIASQFIILTQNIYISFVITIPLSTERTATASLT 23
+PF I + FII+ I I+ ITI ++ T T ++T
Sbjct: 15 TPFIITTPFIIIIITITITITITITITITITITITIT 51
>SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)
Length = 570
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 134 LAFRYRFAIHYFNTKYLYFFCYHNPVEYRAHGHRFT 27
+A +YR HY L+ CY ++YR+H H +T
Sbjct: 172 VALQYRSLCHYL----LHKLCYCVALQYRSHCHYYT 203
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 232 ENTLTIAKASFYQWQYRSLPSSWDRTTTQMS 324
E L+I KAS Q+ Y +LP + DRT++ S
Sbjct: 211 EANLSIRKASDIQFNYTTLPIAIDRTSSLKS 241
>SB_2086| Best HMM Match : 7tm_1 (HMM E-Value=9.1e-07)
Length = 827
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 145 CDRPLTDS*SHTADDRKSLQRRRDASTSSENTLTIAKASFYQ 270
CD+ + S D K+L + SSE T K FYQ
Sbjct: 325 CDKESLNDESSQPSDEKNLSKPESEQCSSEEESTAPKEPFYQ 366
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,763,550
Number of Sequences: 59808
Number of extensions: 575931
Number of successful extensions: 1533
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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