Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10d08
         (308 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation ...    29   3.7  
AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens ...    29   3.7  

>BC013590-1|AAH13590.1|  721|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 5 epsilon, 82kDa protein.
          Length = 721

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -1

Query: 185 DQPTTIRPARKIIS---PLETLFLGGVQITLMFLCW-ATFLKIWLLARSKFLIPNIL 27
           DQP  + P   +      LE L   GVQ T +F CW A  +K  LL +SK+  P  L
Sbjct: 62  DQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLL-KSKWCRPTSL 117


>AK091646-1|BAC03712.1|  721|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34327 fis, clone FEBRA2009022, highly similar to
           TRANSLATION INITIATION FACTOR EIF-2B EPSILON SUBUNIT. ).
          Length = 721

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -1

Query: 185 DQPTTIRPARKIIS---PLETLFLGGVQITLMFLCW-ATFLKIWLLARSKFLIPNIL 27
           DQP  + P   +      LE L   GVQ T +F CW A  +K  LL +SK+  P  L
Sbjct: 62  DQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLL-KSKWCRPTSL 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,732,266
Number of Sequences: 237096
Number of extensions: 897359
Number of successful extensions: 1652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)