Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10d06
(689 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 51 2e-07
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 50 4e-07
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 46 4e-06
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 42 8e-05
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 42 1e-04
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 40 4e-04
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 38 0.002
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 31 0.12
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 30 0.27
SPBC409.08 |||spermine family transporter |Schizosaccharomyces p... 30 0.27
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 28 1.5
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 28 1.5
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 3.4
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.4
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 26 4.5
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 26 5.9
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 26 5.9
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 600
G I+ +VW LS+ GR+ ++ G F G+ ++ A++++ T+++ RF SGF + P
Sbjct: 182 GYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCRFFSGFFASAPL 241
Query: 601 AVLISYIAXLHRTELRARVILL 666
V+ + A ++ + R I +
Sbjct: 242 TVVAAAFADMYSNKHRGTAITI 263
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 49.6 bits (113), Expect = 4e-07
Identities = 28/101 (27%), Positives = 54/101 (53%)
Frame = +1
Query: 370 MNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFA 549
+ +SLL M TV + Y S ++W LS+ GR+ ++ G G+ ++ A+ ++
Sbjct: 170 LTVSLLTM-TVFLLGY---CSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAVGKDIQ 225
Query: 550 TLLVMRFASGFLFNGPFAVLISYIAXLHRTELRARVILLXS 672
T+++ RF +GF + P V+ + +A ++ + R I L S
Sbjct: 226 TIMMCRFFAGFFASAPLTVVAAALADMYSNKYRGTAITLFS 266
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 46.4 bits (105), Expect = 4e-06
Identities = 19/82 (23%), Positives = 44/82 (53%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 600
G S ++W +S+ +GR+ ++ G F + + A++++ T+++ RF SGF + P
Sbjct: 145 GFASGPILWAPISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFSGFCASSPL 204
Query: 601 AVLISYIAXLHRTELRARVILL 666
+V+ + A + + R + +
Sbjct: 205 SVVAAAFADMFDNKTRGPAVCI 226
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 600
G S +VW + + GRR+ M+ F + + A +++ T+++ RF GF + P
Sbjct: 122 GFASGPVVWAPMCELFGRRRPMIIAVFIFCIFHIAVATAKDIQTVMICRFFCGFFGSSPI 181
Query: 601 AVLISYIAXLHRTELRARVILLXS 672
+ + + R VI + S
Sbjct: 182 TTVAGSFSDMFSARTRGLVIAVYS 205
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 41.5 bits (93), Expect = 1e-04
Identities = 18/54 (33%), Positives = 33/54 (61%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 582
G++ +++ LS+ GRR + ++G+ L+++ A+S N A +V RF SGF
Sbjct: 87 GVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFSGF 140
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 39.5 bits (88), Expect = 4e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLV 561
G++ AMVW +DT+GRR F +G+ + A S NFA++ V
Sbjct: 130 GLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIAGASPNFASICV 176
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 37.5 bits (83), Expect = 0.002
Identities = 18/82 (21%), Positives = 37/82 (45%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 600
G + W +S+ GR+ + G F + ++ A +Q+ T+++ RF G+ P
Sbjct: 186 GYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGYGACVPL 245
Query: 601 AVLISYIAXLHRTELRARVILL 666
V+ + A ++ R I +
Sbjct: 246 CVVAAAFADMYPNRYRGTAITI 267
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 31.5 bits (68), Expect = 0.12
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +1
Query: 433 SAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLI 612
S M+ LS+ GRR ++ G + + +++ A + + RF +GF P +
Sbjct: 98 SPMISAPLSEVFGRRMLLQVGNVIFIVFNMACGLARTKAQMYIFRFLAGFGSATPMGLGS 157
Query: 613 SYIAXLHRTELRARVILLXSL 675
I+ L + R + + + SL
Sbjct: 158 GTISDLFTPDERGKAVAVMSL 178
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = -2
Query: 460 PTGSPTPSRTISFLR-----KSWPSQFPYPRETSS 371
PT SP S ++SF+ WPSQ+ +P++T S
Sbjct: 232 PTTSPINSTSLSFVDAKKPGSKWPSQYDFPKKTKS 266
>SPBC409.08 |||spermine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 539
Score = 30.3 bits (65), Expect = 0.27
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +1
Query: 454 LSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLISYIAXLH 633
LS+ +GRR + + ++++ A++ N A LL++RF G P + I+ +
Sbjct: 160 LSEMIGRRIVYLVTLMIYIVLQIPCALAPNIACLLIVRFFCGCFGCTPLTLAGGVISDVW 219
Query: 634 RTELRARVI 660
T R I
Sbjct: 220 ETRERGLAI 228
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 27.9 bits (59), Expect = 1.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 466 LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGP 597
+GR++I V +++ A+ + LL MRF +GF F P
Sbjct: 148 VGRQKIYVLSLLVFVCLQIPTALGSSLGVLLPMRFLAGF-FGSP 190
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.9 bits (59), Expect = 1.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = +1
Query: 451 FLSDTLGRRQIMVWGFFCSGLVEL-------TAAMSQNFATLLVMRFASGFLFNGPFAVL 609
FL + LGR+ I + G F +GL+ T + FA ++ +F S F GP A
Sbjct: 401 FLVEKLGRKWIQLQGLFITGLMFAILAGSWDTISTGGRFACFVIAQFFSNF---GPNATT 457
Query: 610 ISYIAXLHRTELR 648
Y A + +R
Sbjct: 458 FLYPAEVFPARVR 470
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 454 LSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFA 603
LS GR + L ++ +QN TL+++RF GF + P +
Sbjct: 158 LSGIYGRFVVYFCTLLMFTLFQIGGGCAQNIWTLVILRFFQGFFGSTPLS 207
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 421 GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
G+ + G LSD LGR+ + + ++ A+++N+A L++ G
Sbjct: 129 GVALGPLFLGPLSDLLGRKLVYIGSLIIYVCFCISCALARNYAQLVISMLIMG 181
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 394 GTVTAMTYGGMISSAMVWGFLSDTLGRR 477
G V A T G I +++GFL D GR+
Sbjct: 86 GVVNAATNIGNIMGQLLFGFLGDFFGRK 113
>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 531
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 466 LGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGP 597
+GR++I V +++ A+ + LL MRF +G +F P
Sbjct: 148 IGRQKIYVLSLIVFICLQIPTALGSSLGVLLPMRFLAG-VFGSP 190
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 439 MVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
M G LSD GR+ + F + ++ A+ +N +++ F G
Sbjct: 135 MFLGPLSDIGGRKPVYFCSIFVYTVFNISCALPRNIVQMIISHFIIG 181
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,027,032
Number of Sequences: 5004
Number of extensions: 33385
Number of successful extensions: 133
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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