Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10d06
(689 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 45 5e-05
SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05) 38 0.010
SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.094
SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022) 32 0.50
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 31 0.67
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3) 30 1.5
SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068) 30 2.0
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 29 2.7
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 29 3.6
SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12) 29 3.6
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 29 4.7
SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_43212| Best HMM Match : MFS_1 (HMM E-Value=0.00051) 28 6.2
SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073) 28 6.2
SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05) 28 8.2
SB_11705| Best HMM Match : Cu2_monooxygen (HMM E-Value=1.8e-17) 28 8.2
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 28 8.2
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +1
Query: 400 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVW--GFFCSGLVELTAAMSQNFATLLVMRFA 573
+ + T G I A++ G L+D+LGR+ ++V G F +G V + A +++ LLV R
Sbjct: 92 IVSGTIGTAIVGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKH--VLLVGRLV 149
Query: 574 SGFLFNGPFAVLISYIAXLHRTELRARVILLXSLFYT 684
G G + Y+A + +R +++ L +LF T
Sbjct: 150 IGLGIGGASMTVPIYVAEAAPSSMRGKLVTLNNLFIT 186
>SB_58306| Best HMM Match : Sugar_tr (HMM E-Value=2.6e-05)
Length = 457
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/94 (23%), Positives = 44/94 (46%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 576
T+ + + GM+ ++V G +SD GR++ + + G+ + +A + +RF
Sbjct: 78 TLQSCFFVGMLIGSLVCGVISDAWGRKKCLFISYTLLGVAGVGSACVDCVSFFAFLRFVV 137
Query: 577 GFLFNGPFAVLISYIAXLHRTELRARVILLXSLF 678
GF G Y+A + + R + +L +LF
Sbjct: 138 GFGLTGVMLSEYVYLAEMVGPKRRTLIAVLFALF 171
>SB_58285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 34.3 bits (75), Expect = 0.094
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 394 GTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFA 573
G +++ + G + A+ G+LSD GRR ++ +G + +A+S F ++ R
Sbjct: 107 GVSSSVIFAGWLLGAIFIGWLSDRTGRRYVVYFGSLGLLAAAVVSALSPFFWLFVLSRAI 166
Query: 574 SGFLFNG----PFAVLISYIAXLHR 636
G + G F ++ ++ HR
Sbjct: 167 VGVMIGGSSLCQFILMTEFVGVRHR 191
>SB_28173| Best HMM Match : Sugar_tr (HMM E-Value=0.022)
Length = 453
Score = 31.9 bits (69), Expect = 0.50
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 400 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
V + + GM+ +MV G+ SD GRR ++ G ++ A + + L +RF G
Sbjct: 118 VQSCFFAGMLVGSMVGGWASDRFGRRLCLLVGSAIMLILSFGTAFADCLSLLAFLRFGVG 177
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +1
Query: 400 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
V + + GM+ ++V G+ SD GRR ++ G ++ + + L ++RF G
Sbjct: 117 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 176
Query: 580 FLFNGPFAVLISYIAXLHRTELRARVILLXSLFYTL 687
F Y+ L + R + F+ L
Sbjct: 177 FALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDL 212
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +1
Query: 400 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
V + + GM+ ++V G+ SD GRR ++ G ++ + + L ++RF G
Sbjct: 630 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 689
Query: 580 FLFNGPFAVLISYIAXLHRTELRARVILLXSLFYTL 687
F Y+ L + R + F+ L
Sbjct: 690 FALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDL 725
>SB_55039| Best HMM Match : MFS_1 (HMM E-Value=5.3)
Length = 509
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 391 MGTVT-AMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 546
+GTV A + GM+ +++ G LSD LGR++ W + S ++ L ++ S +F
Sbjct: 100 LGTVLQACDFSGMVLGSLISGNLSDRLGRKK---WCLY-SAIILLISSTSSSF 148
>SB_17852| Best HMM Match : MFS_1 (HMM E-Value=0.00068)
Length = 256
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +1
Query: 367 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVW---GFFCSGLV-ELTAA- 531
DM + + G V + + G + + + GFLSD G ++++W G S LV L A+
Sbjct: 65 DMGWNKRESGLVLSSFFWGYLITQIPGGFLSDVYGAERLLLWAVTGCSLSTLVIPLVASQ 124
Query: 532 -MSQNFATLLVMRFASGFLFNG 594
++ +L+ R A G +F G
Sbjct: 125 KVTSPITLVLISRLALG-VFQG 145
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +1
Query: 406 AMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
++ + G + +V+G LSD GRR+++ V ++ + V RF GF
Sbjct: 98 SIMFTGWLFGNIVFGILSDKYGRRKVLFISSCMVCWVAFASSFVPYYWLYAVFRFFIGFG 157
Query: 586 FNGPFAVL 609
G +L
Sbjct: 158 LGGSIVIL 165
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 99 HRHRASTATGRAGRSETVMRLAAPTRPSSGGHS 1
H H +ST T R+ + + APTR SS GHS
Sbjct: 311 HGHSSSTITSRSQHQHDHVTVTAPTR-SSHGHS 342
>SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12)
Length = 186
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 13 RGRSRRSCQP-HHRLGAPSPAGSRTCAMAVGQDAGAARPAEEIPHDH 150
+GR +C+P +RL +P G + CA G A A+ H+H
Sbjct: 85 QGRQCDTCKPGFYRLTRDNPEGCQECACHHGGTANASNVCVTTQHEH 131
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 415 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGF 582
+ GM +++ G +SD GRR M + + A+ + + L ++RF GF
Sbjct: 64 FSGMAVGSLLGGLISDAFGRRLCMFLSCGILVISGVAASFADCLSLLGLLRFCIGF 119
>SB_47019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 463 CPTGSPTPSRTISFLRKSWPSQFPYPRETSSCRTAL 356
C TG P + I +RK P P R+ + C+T L
Sbjct: 81 CITGERMPDKEIENIRKPPPPLVPLGRQGTECKTWL 116
>SB_43212| Best HMM Match : MFS_1 (HMM E-Value=0.00051)
Length = 446
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 427 ISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPF 600
I+S++V G SD +GR+ IM+ + L+ + ++ +F +L V G + G F
Sbjct: 81 IASSLVLGAWSDRVGRKAIMILPPVGNILMNINYMLNVHFFSLNVNYLIIGIVIAGTF 138
>SB_31109| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.073)
Length = 582
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/93 (23%), Positives = 37/93 (39%)
Frame = +1
Query: 406 AMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
+M + G A+ G ++D GR ++ + L A + +LV+RF GF
Sbjct: 413 SMLFFGWAIGAIFLGIIADKYGRCSVLFPSAILVMGLSLAMAFVKKAWLVLVLRFFIGFF 472
Query: 586 FNGPFAVLISYIAXLHRTELRARVILLXSLFYT 684
G F + L RA L +++T
Sbjct: 473 EGGGFLSMFVLATELVGPAKRALAGTLVWIYFT 505
>SB_34068| Best HMM Match : rve (HMM E-Value=5.7e-05)
Length = 1081
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = -1
Query: 671 LXSRITRARSSVRCXSAMYEIRTANGPLNRKPLANLMTKSVAKFWLMAAVSSTRPEQKKP 492
L R +R R + ++ +A+ P+ A + + L+ ++ +++
Sbjct: 705 LGRRSLASRRDARACARAPKMPSAHTPVPESNSAWSASSVIGVAGLLVSLIGLYTRRREL 764
Query: 491 HTMIWRRPSVSDRK--PHTIADDIIPP 417
R P+V+ R PH ADD+ PP
Sbjct: 765 AAAFTRTPAVNQRATDPHVAADDVTPP 791
>SB_11705| Best HMM Match : Cu2_monooxygen (HMM E-Value=1.8e-17)
Length = 413
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +3
Query: 354 ASAVRHELVSLGYGNCDGHDLRRNDIVRDGVGLPVGHARPAPDHGVGLLLL 506
AS+V++ ++ + YG+ D +N ++D G+ + P H G+LL+
Sbjct: 154 ASSVKYLVLQVHYGHVD--KFVKNPDLKDSSGITIRTTHERPPHLAGILLV 202
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Frame = +1
Query: 406 AMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
A+ G++ ++ + +SD GRR M F + + +S + + RF +G
Sbjct: 4 AVYMAGLLVGSVTFSSISDHFGRRLSMFLSIFLMAACGIVSGVSDCLSMFALFRFGAGAA 63
Query: 586 FNG----PFAVLISYIAXLHRT 639
G + + + HRT
Sbjct: 64 CAGCLLARYVYCVELVVRKHRT 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,773,403
Number of Sequences: 59808
Number of extensions: 298157
Number of successful extensions: 1133
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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