Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10d06
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 54 7e-08
Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 38 0.005
Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical p... 38 0.009
Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical pr... 37 0.012
AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical ... 37 0.012
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 36 0.036
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 35 0.048
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 34 0.11
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 34 0.11
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 34 0.11
U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical pr... 32 0.44
U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical p... 32 0.44
Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical pr... 31 0.59
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 31 0.59
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 31 0.59
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 31 0.59
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 31 0.59
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 31 0.78
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 30 1.8
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 29 2.4
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 29 3.1
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 29 3.1
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 29 3.1
Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic catio... 29 4.1
Z92777-9|CAJ58495.1| 396|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical pr... 27 9.6
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/143 (24%), Positives = 62/143 (43%)
Frame = +1
Query: 259 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 438
G+G+F L L + + I C+ +S + VT + GM+ S+
Sbjct: 77 GFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSS 136
Query: 439 MVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLISY 618
WG + D GRR+ + + + ++ + + MS +F LL R +GF G + Y
Sbjct: 137 TFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLY 196
Query: 619 IAXLHRTELRARVILLXSLFYTL 687
L T RA+ ++L F+ +
Sbjct: 197 AEFL-PTAQRAKCVVLIESFWAI 218
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/143 (24%), Positives = 62/143 (43%)
Frame = +1
Query: 259 GYGKFNLCLMLCSLPXXXXXXXXXXXXXYIFSRAQCDMNLSLLDMGTVTAMTYGGMISSA 438
G+G+F L L + + I C+ +S + VT + GM+ S+
Sbjct: 77 GFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSS 136
Query: 439 MVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLISY 618
WG + D GRR+ + + + ++ + + MS +F LL R +GF G + Y
Sbjct: 137 TFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLY 196
Query: 619 IAXLHRTELRARVILLXSLFYTL 687
L T RA+ ++L F+ +
Sbjct: 197 AEFL-PTAQRAKCVVLIESFWAI 218
>Z68219-5|CAJ43449.1| 343|Caenorhabditis elegans Hypothetical
protein T05A1.5b protein.
Length = 343
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 349 FSRAQCDMNLS--LLDMGTVTAMTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVE 519
F Q + N++ L+D G +T+ + G ++ +D +GRR +++ F SGL
Sbjct: 104 FVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSG 163
Query: 520 LTAAMSQNFATLLVMRFASGFLF 588
+ AA + F +L+ RF G F
Sbjct: 164 IGAAYAPTFEIMLIGRFFQGSCF 186
>Z68219-4|CAA92482.2| 359|Caenorhabditis elegans Hypothetical
protein T05A1.5a protein.
Length = 359
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +1
Query: 349 FSRAQCDMNLS--LLDMGTVTAMTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVE 519
F Q + N++ L+D G +T+ + G ++ +D +GRR +++ F SGL
Sbjct: 120 FVTVQNEFNITKTLIDPGEMTSSIFFLGNGILGQIYAVAADRIGRRPVLIASLFISGLSG 179
Query: 520 LTAAMSQNFATLLVMRFASGFLF 588
+ AA + F +L+ RF G F
Sbjct: 180 IGAAYAPTFEIMLIGRFFQGSCF 202
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 415 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 594
+ G++ +G +SD +GR+ + V+ L+ ++ N+ LL +RF G G
Sbjct: 92 FAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGG 151
Query: 595 PFAVLISYI 621
V+ +++
Sbjct: 152 TLVVVCTFV 160
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +1
Query: 415 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 594
+ G++ +G +SD +GR+ + V+ L+ ++ N+ LL +RF G G
Sbjct: 92 FAGVLCGTFSFGAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGG 151
Query: 595 PFAVLISYI 621
V+ +++
Sbjct: 152 TLVVVCTFV 160
>Z99281-14|CAB16524.1| 532|Caenorhabditis elegans Hypothetical
protein Y57G11C.23 protein.
Length = 532
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +1
Query: 412 TYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFN 591
T+ G + ++ G+LSDT+GRR + ++ + +A + + + RF GF
Sbjct: 113 TFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIFRFLVGFAIA 172
Query: 592 GPFAVLISYIAXL 630
G V +Y + +
Sbjct: 173 GTLTVGWTYASEM 185
>Z92775-4|CAB07163.4| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 418 GGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
GGMI S V LSD LGRR + + + S L A + N+ L+ RF SG
Sbjct: 149 GGMIVSPFV-SQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFLLFRFISG 201
>AL132895-5|CAC35863.3| 501|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 501
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +1
Query: 418 GGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
GGMI S V LSD LGRR + + + S L A + N+ L+ RF SG
Sbjct: 149 GGMIVSPFV-SQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFLLFRFISG 201
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 35.5 bits (78), Expect = 0.036
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +1
Query: 403 TAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASG 579
T++ + G + ++ ++D GRR I++ +G+V +++ NF LLV RF G
Sbjct: 133 TSIYFLGNLLIGQLFAVVADRFGRRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFIQG 191
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 35.1 bits (77), Expect = 0.048
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +1
Query: 367 DMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNF 546
D N+S+L V A+ G+ ++++G++SD GR+++ + S ++ L +
Sbjct: 73 DTNVSVLWWENVIAIQQVGIFVGSILFGYISDHFGRQKVCQYSLLISSVILLVEGFLSST 132
Query: 547 ATLLVMRFASG 579
+ + RF G
Sbjct: 133 ILIALCRFIIG 143
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 415 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 594
Y G++ +++G LSD GR+ I + + + L +S N L + RF SG G
Sbjct: 93 YLGVLVGTVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARFCSGLSIAG 152
Query: 595 PFAVLISYI 621
+ ++I
Sbjct: 153 VLVCICAWI 161
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/94 (18%), Positives = 45/94 (47%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 576
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 148 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 207
Query: 577 GFLFNGPFAVLISYIAXLHRTELRARVILLXSLF 678
GF G + V + L + R+ + ++ ++F
Sbjct: 208 GFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVF 241
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/94 (18%), Positives = 45/94 (47%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 576
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 114 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 173
Query: 577 GFLFNGPFAVLISYIAXLHRTELRARVILLXSLF 678
GF G + V + L + R+ + ++ ++F
Sbjct: 174 GFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVF 207
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/94 (18%), Positives = 45/94 (47%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 576
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 148 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 207
Query: 577 GFLFNGPFAVLISYIAXLHRTELRARVILLXSLF 678
GF G + V + L + R+ + ++ ++F
Sbjct: 208 GFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVF 241
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/94 (18%), Positives = 45/94 (47%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFAS 576
TV A+ + G + + G ++D +GR++++ W + L ++ + +++ +
Sbjct: 114 TVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAPTWWIYAILKAGT 173
Query: 577 GFLFNGPFAVLISYIAXLHRTELRARVILLXSLF 678
GF G + V + L + R+ + ++ ++F
Sbjct: 174 GFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVF 207
>U00031-5|AAP68960.1| 534|Caenorhabditis elegans Hypothetical
protein B0361.11 protein.
Length = 534
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 400 VTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 567
+T T G +I+ + L+D GR+ I+V + L + A+ S NFA L++R
Sbjct: 150 LTIFTIGAVIAVPFM-SMLADRYGRKPIIVTTAILAFLANMAASFSPNFAIFLILR 204
>Z79602-1|CAB01888.3| 508|Caenorhabditis elegans Hypothetical
protein K09E9.1 protein.
Length = 508
Score = 31.9 bits (69), Expect = 0.44
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Frame = +1
Query: 364 CDMNLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG--FFCSGLVELTAAMS 537
C N + + + +G +I S V GFLSD LGR+ + + G + LT +M
Sbjct: 107 CQKNSNQTTAMMSSLLMWGALIGS-FVCGFLSDRLGRKPVYLGCLLMITIGHILLTFSMY 165
Query: 538 QNFATLLVMRFASGFLFNGPFAVLISYIAXLHRTELRARVILLXSL 675
++ T+ A GF G ++ +++ EL +L+ SL
Sbjct: 166 LSWMTINATLAAMGFFCGG--YMVTNFVILTEAFELPKSRLLVVSL 209
>U64844-11|AAB18311.1| 482|Caenorhabditis elegans Hypothetical
protein T22F3.8 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +1
Query: 496 FFCSGLVELTA------AMSQNFATLLVMRFASGFLFNGPFAVL 609
FF SG+V + A NFA L+++RF GF F+ FA +
Sbjct: 125 FFLSGIVSCISTSLIPFAAKWNFAFLIILRFIQGFSFSADFAAI 168
>Z68215-1|CAA92450.1| 517|Caenorhabditis elegans Hypothetical
protein C53B4.1 protein.
Length = 517
Score = 31.5 bits (68), Expect = 0.59
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWG-FFCSGLVELTAAMSQNFATLLVMRFA 573
+++ T+ G + + GFL+D GRR I + F V L+AA++ N + + R
Sbjct: 117 SLSTATFIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAIT-NIYSFYIFRIL 175
Query: 574 SGFLFNGPFAVLISYIAXLHRTELRARVI 660
G +G V +Y + R R++
Sbjct: 176 IGISVSGTLTVGWTYATEMISPNRRLRIL 204
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 678 EQAXQQDHARAQ-LRAVQXRDVRDQNRERPVEQKATGEPH 562
EQ QQ HA AQ LR + R+ R++ RER +Q+A H
Sbjct: 385 EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALH 424
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -3
Query: 681 VEQAXQQDHARAQLRAVQXRDVRDQNRERPVEQKATGEPHD*ERGEVLAHGGRELDQAGA 502
+E A QQ + Q A Q + RDQ RER + E E A DQA
Sbjct: 463 MEMAAQQQQQQQQ--AAQAQAQRDQERERREREAREREAAREREREQAAREAAARDQAAR 520
Query: 501 EEAPHHDLAPAERVRQEA 448
E A A A + +A
Sbjct: 521 EHAQAVQAAAAAAQQAQA 538
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 678 EQAXQQDHARAQ-LRAVQXRDVRDQNRERPVEQKATGEPH 562
EQ QQ HA AQ LR + R+ R++ RER +Q+A H
Sbjct: 897 EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALH 936
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -3
Query: 681 VEQAXQQDHARAQLRAVQXRDVRDQNRERPVEQKATGEPHD*ERGEVLAHGGRELDQAGA 502
+E A QQ + Q A Q + RDQ RER + E E A DQA
Sbjct: 975 MEMAAQQQQQQQQ--AAQAQAQRDQERERREREAREREAAREREREQAAREAAARDQAAR 1032
Query: 501 EEAPHHDLAPAERVRQEA 448
E A A A + +A
Sbjct: 1033 EHAQAVQAAAAAAQQAQA 1050
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
protein 27,isoform a protein.
Length = 1129
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 678 EQAXQQDHARAQ-LRAVQXRDVRDQNRERPVEQKATGEPH 562
EQ QQ HA AQ LR + R+ R++ RER +Q+A H
Sbjct: 902 EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALH 941
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -3
Query: 681 VEQAXQQDHARAQLRAVQXRDVRDQNRERPVEQKATGEPHD*ERGEVLAHGGRELDQAGA 502
+E A QQ + Q A Q + RDQ RER + E E A DQA
Sbjct: 980 MEMAAQQQQQQQQ--AAQAQAQRDQERERREREAREREAAREREREQAAREAAARDQAAR 1037
Query: 501 EEAPHHDLAPAERVRQEA 448
E A A A + +A
Sbjct: 1038 EHAQAVQAAAAAAQQAQA 1055
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 678 EQAXQQDHARAQ-LRAVQXRDVRDQNRERPVEQKATGEPH 562
EQ QQ HA AQ LR + R+ R++ RER +Q+A H
Sbjct: 902 EQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALH 941
Score = 27.5 bits (58), Expect = 9.6
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -3
Query: 681 VEQAXQQDHARAQLRAVQXRDVRDQNRERPVEQKATGEPHD*ERGEVLAHGGRELDQAGA 502
+E A QQ + Q A Q + RDQ RER + E E A DQA
Sbjct: 980 MEMAAQQQQQQQQ--AAQAQAQRDQERERREREAREREAAREREREQAAREAAARDQAAR 1037
Query: 501 EEAPHHDLAPAERVRQEA 448
E A A A + +A
Sbjct: 1038 EHAQAVQAAAAAAQQAQA 1055
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 415 YGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNG 594
Y G++ +++G LSD GRR I + + + ++ + L +RF G G
Sbjct: 93 YVGVLIGTLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRFLVGLSIGG 152
Query: 595 PFAVLISYI 621
V+ ++I
Sbjct: 153 MLVVICAWI 161
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/86 (23%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 373 NLSLLDMGTVTAMTYGGMISSAMVWGFLSDTLGRR---QIMVWGFFCSGLVELTAAMSQN 543
N S L +++ +G +++ ++V+G +SD+ GR+ Q+ G L+ S+N
Sbjct: 123 NTSKLVKNSISVQMFG-VLTGSIVFGQISDSFGRKIGSQVASLGMLIGWLI---VVQSRN 178
Query: 544 FATLLVMRFASGFLFNGPFAVLISYI 621
+ R GF G +++ +I
Sbjct: 179 LLHFTISRTIVGFFTGGSISIINVFI 204
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 397 TVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGL-VELTAAMSQNFATLLVMRFA 573
+ T+ G M+ SA+ G LSD GR++I + F C L +++ S + +++RF
Sbjct: 117 STTSQMIGIMLGSAIA-GQLSDLYGRKKITLL-FLCMMLFFSTSSSFSSSIEVFIIVRFF 174
Query: 574 SGFLFNG 594
G G
Sbjct: 175 IGICCGG 181
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 448 PTPSRTISFLRKSWPSQFPYPRETSSCRTA 359
P S+T L + P Q PYPRE+ + T+
Sbjct: 799 PKHSKTARLLSEETPEQLPYPRESITSTTS 828
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/87 (20%), Positives = 34/87 (39%)
Frame = +1
Query: 388 DMGTVTAMTYGGMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMR 567
D + + + G + A+V+G L D GR+ + G + + + + ++ V+
Sbjct: 95 DSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWEVFAVLL 154
Query: 568 FASGFLFNGPFAVLISYIAXLHRTELR 648
F G V +YI E R
Sbjct: 155 FICGTSVACIMIVFYAYILEFIEPEQR 181
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 448 PTPSRTISFLRKSWPSQFPYPRETSSCRTA 359
P S+T L + P Q PYPRE+ + T+
Sbjct: 515 PKHSKTARLLSEETPEQLPYPRESITSTTS 544
>Z66567-7|CAC42386.3| 414|Caenorhabditis elegans Hypothetical
protein ZK455.8b protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 24 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRFL--LA 81
Query: 586 FNGPFAVLISYIAXLHRTELRARVIL 663
A L +Y+ + T + R I+
Sbjct: 82 ATNEAADLAAYVLCMEVTGTKYRSIV 107
>Z66567-5|CAA91492.4| 757|Caenorhabditis elegans Hypothetical
protein ZK455.8a protein.
Length = 757
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 312 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRFL--LA 369
Query: 586 FNGPFAVLISYIAXLHRTELRARVIL 663
A L +Y+ + T + R I+
Sbjct: 370 ATNEAADLAAYVLCMEVTGTKYRSIV 395
>AF199013-1|AAG28557.1| 414|Caenorhabditis elegans organic cation
transporter protein.
Length = 414
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +1
Query: 409 MTYG-GMISSAMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFL 585
M+Y G + V GF+SD GR+ + + L S+ F LV+RF
Sbjct: 24 MSYSLGYLVGCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRFL--LA 81
Query: 586 FNGPFAVLISYIAXLHRTELRARVIL 663
A L +Y+ + T + R I+
Sbjct: 82 ATNEAADLAAYVLCMEVTGTKYRSIV 107
>Z92777-9|CAJ58495.1| 396|Caenorhabditis elegans Hypothetical
protein C17H1.14 protein.
Length = 396
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 678 EQAXQQDHARAQLRAVQXRDVRD-QNRERPVEQK 580
EQ ++D ARAQ+RA Q + RD + ER E++
Sbjct: 10 EQRRREDRARAQIRADQEQRRRDLEESERRAEEE 43
>Z72505-3|CAA96610.1| 340|Caenorhabditis elegans Hypothetical
protein C50C10.4 protein.
Length = 340
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 511 LVELTAAMS----QNFATLLVMRFASGFLFNGPFAVLI 612
L+ LT MS + + L++ RFA FLF PFA+ I
Sbjct: 135 LMRLTIMMSPRHHERYCQLIMYRFAIPFLFLAPFALSI 172
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 476 RRPSVSDRKPHTIADDIIPP*VMAVTVPISKRDK 375
R + SDRK + DD +P +T ISKRDK
Sbjct: 672 RATARSDRKTKKVNDDDVPFGGREMTFTISKRDK 705
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +1
Query: 436 AMVWGFLSDTLGRRQIMVWGFFCSGLVELTAAMSQNFATLLVMRFASGFLFNGPFAVLIS 615
+++ G SD +GRR++++ + L A S N LLV R G ++
Sbjct: 82 SLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPV 141
Query: 616 YIAXLHRTELRARVILLXSL 675
Y+ T +R ++ +L
Sbjct: 142 YLGETAPTHVRGMLVAAFAL 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,729,937
Number of Sequences: 27780
Number of extensions: 209513
Number of successful extensions: 801
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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