Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10c19
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.0  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    21   6.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 533 PGAFTSSEAKYSLNNSWNSAKETDDLPL 450
           P  FTSS   +S+N    +A+   D+ +
Sbjct: 360 PSGFTSSNHPFSINRLLPTAESKADIKM 387


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = -2

Query: 259 LWRLGRRYRCQRCSTHPRPSK 197
           +W+    Y+C +   HP P +
Sbjct: 69  VWKPDASYKCMQYIQHPLPGQ 89


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 255 GDLAVVIGVSAAQPIP 208
           GD+A+V+    A P+P
Sbjct: 182 GDIALVLPTQGASPLP 197


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 442 KLSKGKSSVSFAEFQELFKEYFASEDVNAPGNFVFG 549
           K+ +GKS++S+    E  +     EDV    N  +G
Sbjct: 233 KVIQGKSALSYERLNEFMRLVEEIEDVIEAINGFYG 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,946
Number of Sequences: 336
Number of extensions: 3365
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)