Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10c16
         (352 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    34   0.58 
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.3  
UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2; ...    32   3.1  
UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    32   3.1  
UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep: D-...    31   4.1  
UniRef50_Q6ALP6 Cluster: Putative uncharacterized protein; n=1; ...    31   7.2  
UniRef50_A5IHN2 Cluster: Lipid A biosynthesis acyltransferase; n...    31   7.2  
UniRef50_Q4CWK8 Cluster: Putative uncharacterized protein; n=2; ...    31   7.2  
UniRef50_UPI000049A291 Cluster: hypothetical protein 74.t00024; ...    30   9.5  
UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3; ...    30   9.5  

>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 34.3 bits (75), Expect = 0.58
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 276 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFLPPS-KEKCSDRHNRH 142
           NK + P  Y  + SSP+   S+   GNL FL  S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 288 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPFL 184
           Y FANK +F ++Y+L+ S  I  L SV +G + F+
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAFM 108


>UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 567

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -3

Query: 230 RFAP*APCGGGTFLSCHQVKRNVPTATTAIAPSAKALAADV 108
           RFAP A     +F + HQ ++++ TA   +AP+A A AA +
Sbjct: 251 RFAPAAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPI 291


>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +3

Query: 141 DGGCGGRNISLYLVARKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 302
           D GCG  ++SLYL  R   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep:
           D-aminopeptidase - Myxococcus xanthus (strain DK 1622)
          Length = 419

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 206 GGGTFLSCHQVKRNVPTATTAIAPSAKALAADVLLPC 96
           GGGT + CH  K  + TA+  +  S       VLL C
Sbjct: 198 GGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQC 234


>UniRef50_Q6ALP6 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 225

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 235 FADSRLELRAVGEPSFLATK*REMFRPPQPP 143
           F ++  +L+AVG+P+FL T  +++F  P PP
Sbjct: 100 FRNNLPDLQAVGDPAFLITDDKKIFILPPPP 130


>UniRef50_A5IHN2 Cluster: Lipid A biosynthesis acyltransferase; n=5;
           Legionella pneumophila|Rep: Lipid A biosynthesis
           acyltransferase - Legionella pneumophila (strain Corby)
          Length = 281

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 96  RIRILGHRKMAIYLWQRKTTMIVMEHFARYRF 1
           ++ ++GH KM   + Q+K  ++V  HF  + F
Sbjct: 80  QVEVIGHEKMLAVVAQKKGVLVVTGHFGNWEF 111


>UniRef50_Q4CWK8 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 508

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 143 WRLWRSEHFSLLGGKK 190
           W+ WR +HFSL GG++
Sbjct: 150 WKCWRDKHFSLFGGRE 165


>UniRef50_UPI000049A291 Cluster: hypothetical protein 74.t00024;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 74.t00024 - Entamoeba histolytica HM-1:IMSS
          Length = 408

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 206 GGGTFLSCHQVKRNVPTATTAIAPSAKALAADVLLPCEL 90
           GG   +SC  V+        A+ PS K  A++V  PCE+
Sbjct: 249 GGSCLVSCKCVQSIYKNVQPAMIPSEKDYASNVAFPCEV 287


>UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 578

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -3

Query: 212 PCGGGTFLSCHQVKRNVPTATTAIAPSAKALAADVLLPCELEFLVIAKWQ 63
           PCG   +L+CH      P   T   P A   +  V  PC  ++L  ++W+
Sbjct: 323 PCGHLCWLTCHDETPCAPCKETVTVPCACG-SRHVSCPCFCQYLPESEWE 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,307,036
Number of Sequences: 1657284
Number of extensions: 6491143
Number of successful extensions: 16237
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16237
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11088517726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)