Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10c13
         (460 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   4.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   5.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 196 SKKEAKLREIEAKEKVIRDAKLKEEK 273
           +KKE K ++   KEK   D +L + K
Sbjct: 258 TKKEDKKKKKTIKEKYTEDEELNKTK 283


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 163 VLYGAFHQNRLSKKEAKLREIEAKEK 240
           V +  F+QN+L +  +KL +++ K K
Sbjct: 94  VFFCLFYQNKLIEVISKLHKLDNKLK 119



 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 62  YSNFITKCQIYHTEHLCVY 118
           Y NF+++ +I H E L  +
Sbjct: 213 YKNFLSQVEIIHNEILVTH 231


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 62  YSNFITKCQIYHTEHLCVY 118
           Y NF+++ +I H E L  +
Sbjct: 38  YKNFLSQVEIIHNEILVTH 56


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
          transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 19 IGFFQKVSYNNCFTVQQFYNKMSDLP 96
          +G +   S +  +    +YN  SD+P
Sbjct: 5  VGMYGHHSQHGTYPSDNYYNYTSDIP 30


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
          protein.
          Length = 210

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 19 IGFFQKVSYNNCFTVQQFYNKMSDLP 96
          +G +   S +  +    +YN  SD+P
Sbjct: 5  VGMYGHHSQHGTYPSDNYYNYTSDIP 30


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
          protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = +1

Query: 19 IGFFQKVSYNNCFTVQQFYNKMSDLP 96
          +G +   S +  +    +YN  SD+P
Sbjct: 5  VGMYGHHSQHGTYPSDNYYNYTSDIP 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,912
Number of Sequences: 336
Number of extensions: 1970
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)