Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b23
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 554 QQHIAAQMSSAPATMHATPTYR 489
           +QH+   +SS P      PTY+
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 554 QQHIAAQMSSAPATMHATPTYR 489
           +QH+   +SS P      PTY+
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 554 QQHIAAQMSSAPATMHATPTYR 489
           +QH+   +SS P      PTY+
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYK 198


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +2

Query: 146 FYIFIL--CNFLVIVDFCFYYII*KKFCC 226
           +Y FIL   + L++V   ++Y +   FCC
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLFCC 270


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +2

Query: 122 VNFIDGSIFYIFILCNFLVIVDF 190
           ++F+D   +++F+LC+ LV + F
Sbjct: 392 LSFVD---YFVFLLCSILVNIAF 411


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 565 PARQPQNERASTDTHQIDDPXHV 633
           P  QP      T+ H I++P  V
Sbjct: 741 PHHQPPRNPVGTNPHDINNPLSV 763


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 565 PARQPQNERASTDTHQIDDPXHV 633
           P  QP      T+ H I++P  V
Sbjct: 633 PHHQPPRNPVGTNPHDINNPLSV 655


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,019
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)