Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b17
(714 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting... 345 1e-94
BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting... 282 1e-75
AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2 s... 282 1e-75
AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens ... 282 1e-75
X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase pr... 227 2e-59
BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein. 32 1.8
AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein. 32 1.8
AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2 prot... 32 1.8
>BC008861-1|AAH08861.1| 351|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d1 protein.
Length = 351
Score = 345 bits (847), Expect = 1e-94
Identities = 154/193 (79%), Positives = 176/193 (91%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K G+L Q+DYLNLVQCETLEDLKLHLQ TDYG FLANE SPL+VS
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLANEASPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
IDD+L+EK+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PK
Sbjct: 69 VIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLGSFEQMEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKA
Sbjct: 129 CHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKA 188
Query: 652 YLEAFYDFCKQIG 690
YLE+FY FC +G
Sbjct: 189 YLESFYKFCTLLG 201
>BC065207-1|AAH65207.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal 38kDa, V0 subunit d2 protein.
Length = 350
Score = 282 bits (691), Expect = 1e-75
Identities = 122/193 (63%), Positives = 159/193 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIG 690
YLEAFY FCK G
Sbjct: 189 YLEAFYKFCKNHG 201
>AY079172-1|AAL87000.1| 350|Homo sapiens vacuolar H+ ATPase d2
subunit protein.
Length = 350
Score = 282 bits (691), Expect = 1e-75
Identities = 122/193 (63%), Positives = 159/193 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIG 690
YLEAFY FCK G
Sbjct: 189 YLEAFYKFCKNHG 201
>AK096027-1|BAC04679.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38708 fis, clone KIDNE2002872, moderately
similar to Mus musculus Ac39/physophilin mRNA. ).
Length = 350
Score = 282 bits (691), Expect = 1e-75
Identities = 122/193 (63%), Positives = 159/193 (82%)
Frame = +1
Query: 112 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 291
FN+D GYLEGL RG K +L Q DY+NLVQCETLEDLK+HLQ TDYG FLAN +PL+VS
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 292 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 471
ID ++R++L EF++ RNHS+EPLSTFL ++T SYMIDN+ILL+ G L ++ + E++ K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 472 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 651
CHPLG F +MEA+++A TP++L+NA+L++TPLAPFF DC+SE LDE+NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 652 YLEAFYDFCKQIG 690
YLEAFY FCK G
Sbjct: 189 YLEAFYKFCKNHG 201
>X71490-1|CAA50591.1| 274|Homo sapiens vacuolar proton ATPase
protein.
Length = 274
Score = 227 bits (556), Expect = 2e-59
Identities = 100/124 (80%), Positives = 116/124 (93%)
Frame = +1
Query: 319 LVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPKCHPLGSFEQ 498
+V+EF+H+RNH+ EPL++FLDFITYSYMIDN+ILLITGTLHQR I+EL+PKCHPLGSFEQ
Sbjct: 1 MVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQRSIAELVPKCHPLGSFEQ 60
Query: 499 MEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKAYLEAFYDFC 678
MEA+++A TPAELYNA+LVDTPLA FF DCISEQDLDEMNIEIIRNTLYKAYLE+FY FC
Sbjct: 61 MEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFC 120
Query: 679 KQIG 690
+G
Sbjct: 121 TLLG 124
>BC020880-1|AAH20880.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AL031731-6|CAI20214.1| 293|Homo sapiens F-box protein 6 protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
>AF233223-1|AAF67153.1| 293|Homo sapiens F-box protein FBG2
protein.
Length = 293
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 58 RKLFLVSLKIIIKMKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQ 237
+K F+ S ++ +K + + + GY E L F+ I+ + + C LK+ L
Sbjct: 130 KKYFVTSYEMCLKSQ-LVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLA 188
Query: 238 GTDYGTFLANEPSPLSV 288
DY + EP P+++
Sbjct: 189 SADYFVLASFEPPPVTI 205
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,887,496
Number of Sequences: 237096
Number of extensions: 2323014
Number of successful extensions: 4528
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4528
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -