Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b17
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.6  
AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    23   2.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 565 LAPFFVDCISEQDLDEMNIEIIRN 636
           + P F+  + EQ L E N+E +R+
Sbjct: 149 ILPIFLYALGEQPLTEQNLEELRD 172


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 565 LAPFFVDCISEQDLDEMNIEIIRN 636
           + P F+  + EQ L E N+E +R+
Sbjct: 187 ILPIFLYALGEQPLTEQNLEELRD 210


>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -2

Query: 515 T*IASICSNEPNGWHFGINS 456
           T +  +C ++ +G+H+G++S
Sbjct: 6   TVLCRVCGDKASGFHYGVHS 25


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -2

Query: 515 T*IASICSNEPNGWHFGINS 456
           T +  +C ++ +G+H+G++S
Sbjct: 64  TVLCRVCGDKASGFHYGVHS 83


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 709 HISSSSSRFAYRNHKKLPNTP 647
           HI+  SS+F      KLP TP
Sbjct: 64  HINCDSSKFEEDLMNKLPTTP 84


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 509 IASICSNEPNGWHFGINS 456
           + SIC +  +G H+G+ S
Sbjct: 109 LCSICGDRASGKHYGVYS 126


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 509 IASICSNEPNGWHFGINS 456
           + SIC +  +G H+G+ S
Sbjct: 109 LCSICGDRASGKHYGVYS 126


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 77 ETRNSLRPFNSEPKPRDAI 21
          ET+N L PFN +   R  I
Sbjct: 42 ETKNQLSPFNIDTPNRQKI 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,723
Number of Sequences: 438
Number of extensions: 4080
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)