Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b15
(642 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 76 4e-15
SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar... 30 0.33
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 27 2.3
SPAPB18E9.05c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 4.0
SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA methyltransfera... 26 5.3
SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyc... 26 5.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 7.0
SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces pom... 25 9.3
SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 25 9.3
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 76.2 bits (179), Expect = 4e-15
Identities = 39/162 (24%), Positives = 86/162 (53%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAH 180
NEGFA + ++ PE ++ + +Q A+ D++ ++H + ++ + ++
Sbjct: 338 NEGFATWMSWFSCNHFYPEWKVWESYVTDNLQSALSLDALRSSHPI-EVPIMHDYEINQI 396
Query: 181 FSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGAL 360
F I+Y++G+ ++RM +G +TF+KG++ Y+ + ++ L+ AL A + +D
Sbjct: 397 FDAISYSKGSCVIRMVSKYVGEDTFIKGIQKYISKHRYGNTVTEDLWAALSAESGQD--- 453
Query: 361 NGYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQERW 486
I + W++K G+P+L+V+ GE+++ Q R+
Sbjct: 454 -------ISSTMHNWTKKTGYPVLSVS-ETNDGELLIEQHRF 487
>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 559
Score = 29.9 bits (64), Expect = 0.33
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +3
Query: 183 FYNNLRERCCHSQDDSTLTWSRNLR*RPPQLSP*KTIQ 296
F + ERCCH T + PPQ SP T+Q
Sbjct: 381 FGHRFAERCCHLPGKRIFTIDSSYSEEPPQSSPSSTLQ 418
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 27.1 bits (57), Expect = 2.3
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Frame = +1
Query: 238 LGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGALNGYGGI--TIDTYFRTWSE 411
LG+E KG + +L++R + P A + A+ G T+ + +S
Sbjct: 46 LGIENTAKG-KQFLKQRDYLREFPRPCILRFIACNGQTRAVQSRGDYQKTLAIALKKFSL 104
Query: 412 KAGHPLLTVTINQRTGEMIVTQERWERNTGVSQFPSLWHIPITWTRAGAPEFEDLKPS 585
+ + V ++Q + ++T+E +++ S P + I P FEDL+ S
Sbjct: 105 EDASKFI-VCVSQSSRIKLITEEEFKQICFNSSSPERDRLIIVPKEKPCPSFEDLRRS 161
>SPAPB18E9.05c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 90
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 497 VLRSHLSCVTIISPVLWLIVTVRS 426
+L HLS V+I+SPVL + + + S
Sbjct: 17 ILSMHLSPVSILSPVLLIYLVIHS 40
>SPBC25D12.05 |trm1||N2,N2-dimethylguanosine tRNA
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 548
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 313 HLFTALDAAAVEDG-ALNGYGGITIDTYFRTWSEKAGHPLLTVTINQRT 456
HL A+ A+A + G A+ ++ID YFR + + P+L + ++
Sbjct: 263 HLLYAIAASAAKYGRAIKPLLSLSIDFYFRVFVQIKAKPVLVKNLQSQS 311
>SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 5.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 37 TASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAHFSTITYARG 207
TA A E+ TRF + + ++ H + L+VNDP T+ ++T A G
Sbjct: 182 TAGTASEM---TRFAIITEETRHIKMAIIDKHTMPILSVNDPETMYGLPPSLTAATG 235
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +2
Query: 242 ESKPSLKASATISVKDN--SMLLSLITFSRL 328
+SKPS+ S +I+V DN S+L S +T + L
Sbjct: 485 QSKPSIDPSESITVTDNQDSLLFSQLTNNAL 515
>SPBP4G3.02 |pho1||acid phosphatase Pho1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 453
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 244 VETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGALNGYG 372
VE F G + Y R + A ++++TA V+ GYG
Sbjct: 133 VELFDMGRQFYERYHELFNASTYNIYTAAQQRVVDSALWYGYG 175
>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 469
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 301 AEPHHLFTALDAAAVEDGALNGYGGITID 387
++P + LD + VED + G+G +++D
Sbjct: 142 SDPRNQNLELDLSQVEDAVVIGHGNVSLD 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,697,095
Number of Sequences: 5004
Number of extensions: 55024
Number of successful extensions: 173
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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