Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b15
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 82 4e-16
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 82 4e-16
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 81 9e-16
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 55 4e-08
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 45 4e-05
AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormo... 28 4.9
AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signali... 28 4.9
Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical p... 28 6.5
Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical pr... 27 8.6
U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase... 27 8.6
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Frame = +1
Query: 4 EGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAHF 183
EGFA F +Y + PE F+ +++ M D++ +H + ++ +++P + +
Sbjct: 336 EGFASFMEYMFVGANCPEFKIWLHFLNDELASGMGLDALRNSHPI-EVEIDNPNELDEIY 394
Query: 184 STITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGALN 363
+ITYA+ ++ RM + L F KGLR YL+ Q++ A L+TAL A+
Sbjct: 395 DSITYAKSNSVNRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEAS------- 447
Query: 364 GYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVT--QERWERNTGVSQFPSLWHIPI 537
G ++ W+++ G P+L V+ Q I+T Q R+ + G S W +PI
Sbjct: 448 ---GQNVNELMSGWTQQMGFPVLKVSQRQDGNNRILTVEQRRFISDGGEDPKNSQWQVPI 504
Query: 538 TWTRAGAPEFEDLKPSQFISQQVTSIN-RGTTGLEW 642
T +P D+K + ++ G EW
Sbjct: 505 TVAVGSSP--SDVKARFLLKEKQQEFTIEGVAPGEW 538
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensitive
aminopeptidaseprotein 1, isoform b protein.
Length = 948
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Frame = +1
Query: 4 EGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAHF 183
EGFA F +Y + PE F+ +++ M D++ +H + ++ +++P + +
Sbjct: 400 EGFASFMEYMFVGANCPEFKIWLHFLNDELASGMGLDALRNSHPI-EVEIDNPNELDEIY 458
Query: 184 STITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGALN 363
+ITYA+ ++ RM + L F KGLR YL+ Q++ A L+TAL A+
Sbjct: 459 DSITYAKSNSVNRMLCYYLSEPVFQKGLRLYLKRFQYSNAVTQDLWTALSEAS------- 511
Query: 364 GYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVT--QERWERNTGVSQFPSLWHIPI 537
G ++ W+++ G P+L V+ Q I+T Q R+ + G S W +PI
Sbjct: 512 ---GQNVNELMSGWTQQMGFPVLKVSQRQDGNNRILTVEQRRFISDGGEDPKNSQWQVPI 568
Query: 538 TWTRAGAPEFEDLKPSQFISQQVTSIN-RGTTGLEW 642
T +P D+K + ++ G EW
Sbjct: 569 TVAVGSSP--SDVKARFLLKEKQQEFTIEGVAPGEW 602
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 80.6 bits (190), Expect = 9e-16
Identities = 52/185 (28%), Positives = 96/185 (51%), Gaps = 5/185 (2%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAPELG--YETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVS 174
NEGFA ++ ++ SV P+ +T +++++Q+ + +D AH L + + P
Sbjct: 412 NEGFADYFMTFIQKSVYPQQATYLDTLQVLDELQVGLTADVRYDAHPL--VYPDGPA--- 466
Query: 175 AHFSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDG 354
F ITY +GA++LRM +LG + F +G+R YL++ Q++ A LF+ L A +
Sbjct: 467 --FDDITYNKGASMLRMLSDVLGADVFKQGIRAYLQKMQYSNANDFDLFSTLTDTAKSNN 524
Query: 355 ALNGYG-GITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQERWERNTGVSQFP--SLW 525
L+ G + + + + + + HPL+ NQ+ G +QE + + ++ P W
Sbjct: 525 ILDWCGLPLNVTDFMQPYIHQTNHPLIRYNNNQKIGGSTFSQEPFLDISDLTATPWNYTW 584
Query: 526 HIPIT 540
IP+T
Sbjct: 585 SIPLT 589
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAP-ELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSA 177
NEGFA +Y T ++ + F ++ + A+ +DSV + H LT ++ V
Sbjct: 406 NEGFATLVEYLGTDEISDGNMRMREWFTMDALWSALAADSVASTHPLT-FKIDKAMEVLD 464
Query: 178 HFSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGA 357
F ++TY +G A+L M + +G E F G+ +YL QF+ A+ +L TAL + D
Sbjct: 465 SFDSVTYDKGGAVLAMVRKTIGEENFNTGINHYLTRHQFDNADAGNLLTAL-GEKIPDSV 523
Query: 358 LNGYG-GITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQERWE-RNTGVSQ------- 510
+ G + I + W+++ G+PLL + T +IV Q R++ TG +
Sbjct: 524 MGPKGVKLNISEFMDPWTKQLGYPLLNASRINNT-HIIVEQSRFKLLATGKEEEKYSNPV 582
Query: 511 FPSLWHIPITWTRAGAPEFE 570
+ W +P+ + G+ E E
Sbjct: 583 WGFKWDVPVWYQVVGSSELE 602
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical protein
T07F10.1a protein.
Length = 988
Score = 80.2 bits (189), Expect = 1e-15
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAP-ELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSA 177
NEGFA +Y T ++ + F ++ + A+ +DSV + H LT ++ V
Sbjct: 418 NEGFATLVEYLGTDEISDGNMRMREWFTMDALWSALAADSVASTHPLT-FKIDKAMEVLD 476
Query: 178 HFSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGA 357
F ++TY +G A+L M + +G E F G+ +YL QF+ A+ +L TAL + D
Sbjct: 477 SFDSVTYDKGGAVLAMVRKTIGEENFNTGINHYLTRHQFDNADAGNLLTAL-GEKIPDSV 535
Query: 358 LNGYG-GITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQERWE-RNTGVSQ------- 510
+ G + I + W+++ G+PLL + T +IV Q R++ TG +
Sbjct: 536 MGPKGVKLNISEFMDPWTKQLGYPLLNASRINNT-HIIVEQSRFKLLATGKEEEKYSNPV 594
Query: 511 FPSLWHIPITWTRAGAPEFE 570
+ W +P+ + G+ E E
Sbjct: 595 WGFKWDVPVWYQVVGSSELE 614
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/161 (24%), Positives = 73/161 (45%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAH 180
NEGFA + +Y + P+ +RF E + + D ++ A+ +D ++
Sbjct: 522 NEGFANYMEYKCVEHLFPDWSIMSRFYAENLAFSQEPDGFLSSRAIES---DDDDSLLNL 578
Query: 181 FSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGAL 360
F I Y + AAI+ M + G + F L YL + ++ A +D + +
Sbjct: 579 FDAINYHKAAAIIHMIAEMAGQKNFQNALVEYLNKYAYSNA------IGVDLWKIVEKHA 632
Query: 361 NGYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQER 483
N G ++I + ++ + G+PLLTV +RT E ++ +
Sbjct: 633 NLQGTVSIPDLAKAYTTQVGYPLLTV---ERTDEGVLVHNQ 670
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 55.2 bits (127), Expect = 4e-08
Identities = 39/161 (24%), Positives = 73/161 (45%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAH 180
NEGFA + +Y + P+ +RF E + + D ++ A+ +D ++
Sbjct: 522 NEGFANYMEYKCVEHLFPDWSIMSRFYAENLAFSQEPDGFLSSRAIES---DDDDSLLNL 578
Query: 181 FSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGAL 360
F I Y + AAI+ M + G + F L YL + ++ A +D + +
Sbjct: 579 FDAINYHKAAAIIHMIAEMAGQKNFQNALVEYLNKYAYSNA------IGVDLWKIVEKHA 632
Query: 361 NGYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQER 483
N G ++I + ++ + G+PLLTV +RT E ++ +
Sbjct: 633 NLQGTVSIPDLAKAYTTQVGYPLLTV---ERTDEGVLVHNQ 670
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 54.8 bits (126), Expect = 5e-08
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = +1
Query: 196 YARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGALNGYGG 375
YA+G + +RM + ++G E F + +R YL F+ E +L+ AL + + +NG
Sbjct: 412 YAKGCSFIRMLEKIVGTEHFNEAIRTYLHTHDFSNVEDKNLYDALRVYS-DKLEING-KP 469
Query: 376 ITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQER-WERNTG-VSQFPSLWHIPITWTR 549
I+ + R W+ + G+P + V+ + G+ ++Q + E TG + + W IPI + +
Sbjct: 470 FDIEEFGRCWTHQTGYPTVYVS-SYYAGQTRLSQVKVKEIVTGDFHECNNKWDIPIWYQQ 528
Query: 550 AGAPEFE 570
+G+ E E
Sbjct: 529 SGSTEVE 535
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 50.0 bits (114), Expect = 1e-06
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 5/152 (3%)
Frame = +1
Query: 97 MAMFSDSVDTAHALTDL-NVNDPTTVSAHFSTITYARGAAILRMTQHLLGVETFVKGLRN 273
+A+ +D +D+ ++ N N + + I Y + A I+RM + L+ + F +GL+
Sbjct: 512 VALRADQIDSISPVSGKKNSNFDSYMEIQGKAIIYKKSAIIIRMIERLVEEDIFRQGLKR 571
Query: 274 YLRERQFNVAEPHHLFTALDAAAVEDGALNGY---GGITIDTYFRTWSEKAGHPLLTVTI 444
+L + A+ LF L V D + G+ ++ TW +A P+ + +
Sbjct: 572 FLNTFLYKNADHEDLFNVL--VYVHDSSAGGHLRGQNFSLSDVMDTWIRQAHFPV--IHV 627
Query: 445 NQRTGEMI-VTQERWERNTGVSQFPSLWHIPI 537
N++ G ++ + QE++E +W IPI
Sbjct: 628 NRKEGSLVTLRQEKYEHVPRDEPEKQVWKIPI 659
>Z71177-6|CAA94872.2| 1090|Caenorhabditis elegans Hypothetical
protein AC3.5 protein.
Length = 1090
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Frame = +1
Query: 88 QVQMAMFSDSVDTAHALTDLNVNDPTTVSAHFSTITYARGAAILRMTQHLLGVETFVKGL 267
+++ + D+ T+ L NV ++ +GAA+LRM Q +GV F K +
Sbjct: 544 EMEKILERDATATSQPLRVKNVFSSADIAEIDHEFIGKKGAAVLRMIQKSVGVNVFNKAI 603
Query: 268 RNYLRERQFNVAEPHHLFTALDAAAVEDGALNGYGGITIDT--YFRTWSEKAGHPLLTV- 438
R+++ + L+ + + A G L G+ +D + TW ++ G PL++V
Sbjct: 604 RSFVSSYRSAYPYDDGLWKSFEKAL--GGKLKGWNNEPLDVAKFVNTWVDQIGFPLVSVE 661
Query: 439 TINQRTGEMIVTQERWERN 495
++ T E+ +QER++ +
Sbjct: 662 KLDDETVEL--SQERFKND 678
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/161 (22%), Positives = 63/161 (39%)
Frame = +1
Query: 1 NEGFARFYQYYLTASVAPELGYETRFIVEQVQMAMFSDSVDTAHALTDLNVNDPTTVSAH 180
NEGFA FY Y + ++ P + + + + D +L + S+
Sbjct: 446 NEGFATFYVYEMMSTERPVTA-QFEYYDSLASLILAQSEEDHRLSLVRELATESQVESSF 504
Query: 181 FSTITYARGAAILRMTQHLLGVETFVKGLRNYLRERQFNVAEPHHLFTALDAAAVEDGAL 360
T Y +G ++RM + L+ F +R YLR+ + LF +L A A + GA
Sbjct: 505 HPTNLYTKGCVLIRMLRDLVSDFDFKAAVRRYLRKNAYRSVSRDDLFASLPAYA-DHGAE 563
Query: 361 NGYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQER 483
+ W G P +T+ N M ++Q +
Sbjct: 564 QE----KLSHVLEGWFVNEGIPEITLIRNYDNEMMTISQRK 600
>AF016438-1|AAB65895.1| 406|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 133 protein.
Length = 406
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 SVAPELGYETRFIVEQVQMAMFSDSVDT-AHALTDLNVNDPTTVSAHFSTITYARGAAIL 219
+V ++ + + + VEQ++ + D HAL+DL DPT V +F I +A
Sbjct: 266 NVKIDIKWSSNYSVEQLRGFLVPDIEKYWRHALSDLVELDPTNVELNFMLIQLCLNSAGQ 325
Query: 220 RMTQHLL 240
+ H+L
Sbjct: 326 KYQGHVL 332
>AF002197-3|AAD34660.1| 1451|Caenorhabditis elegans Notch signaling
pathway homologprotein 1 protein.
Length = 1451
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 361 NGYGGITIDTYFRTWSEKAGHPLLTVTINQRTGEMIVTQERWERNTGV 504
N YG + +DT +T +AG PL+ + + GE + G+
Sbjct: 1125 NKYGRVALDTLLKTVIGQAGTPLIDPPKDYKAGEFFEDMRLYMEGVGL 1172
>Z99281-15|CAB16528.1| 199|Caenorhabditis elegans Hypothetical
protein Y57G11C.25 protein.
Length = 199
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 480 FLCNNHFPSSLVNSNSQKWMSGLLGPSS 397
FLC NHF +S +S +QK S L S+
Sbjct: 168 FLCLNHFEASTSSSTTQKLTSSNLSTST 195
>Z73105-2|CAA97439.2| 803|Caenorhabditis elegans Hypothetical
protein R13.4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +1
Query: 442 INQRTGEMIVTQERWE----RNTGVSQFPSLWHIPITWTRAGAPEFEDLKPSQ 588
I + E+IV QE + RN S P +P WTR +P F P++
Sbjct: 595 IKRIKSEIIVKQETFTDMHGRNVPFSPMPMPGSVPPDWTRLQSPSFSMQSPNK 647
>Z81109-2|CAB03244.1| 408|Caenorhabditis elegans Hypothetical
protein R10D12.2 protein.
Length = 408
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 275 ISVKDNSMLLSLITFSRLWMRLLW 346
IS +D +L+ + F+ LW+ LW
Sbjct: 236 ISTEDKMILIQYVKFANLWLDALW 259
>U13875-11|AAA21158.1| 1193|Caenorhabditis elegans Rna polymerase ii
(b) subunit protein2 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 262 GLRNYLRERQFNVAEPHHLF 321
G +LRER F V++P+H++
Sbjct: 1104 GATQFLRERLFEVSDPYHVY 1123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,019,626
Number of Sequences: 27780
Number of extensions: 314233
Number of successful extensions: 768
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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