Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b14
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ... 52 2e-07
At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ... 49 2e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ... 47 8e-06
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin... 47 1e-05
At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85 hy... 40 0.001
At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PP... 29 2.9
At1g79060.1 68414.m09218 expressed protein 29 2.9
At4g25520.1 68417.m03680 transcriptional co-regulator family pro... 28 3.9
>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +2
Query: 353 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 532
C + +QI E S Y AM AYF D + G AK F +++ EEREHA KL++Y
Sbjct: 97 CEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNK 156
Query: 533 RG 538
RG
Sbjct: 157 RG 158
>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
subunit cowpea2 precursor [Vigna unguiculata]
GI:2970654; contains Pfam profile PF00210: Ferritin-like
domain
Length = 259
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 353 CYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLM 532
C + +QI E S Y A+ AYF D V G AK F +++ EEREHA L++Y
Sbjct: 95 CEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNK 154
Query: 533 RG 538
RG
Sbjct: 155 RG 156
>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
subunit cowpea2 precursor GI:2970654 (Vigna
unguiculata); contains Pfam profile PF00210:
Ferritin-like domain
Length = 253
Score = 47.2 bits (107), Expect = 8e-06
Identities = 25/55 (45%), Positives = 30/55 (54%)
Frame = +2
Query: 374 QIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 538
QI E S Y A+ AYF D V GFAK F D++ EER HA ++Y RG
Sbjct: 96 QINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRG 150
>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
[Arabidopsis thaliana] GI:1246401, GI:8163920
Length = 255
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 362 MMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMRG 538
++ +QI E S Y +M AYF D V G AK F +++ EER HA K ++Y RG
Sbjct: 97 VINEQINVEYNVSYVYHSMYAYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRG 155
>At3g61010.1 68416.m06826 glycosyl hydrolase family protein 85
hypothetical protein F9F8.14 - Arabidopsis thaliana,
EMBL:AC009991
Length = 355
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 377 IQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDY 523
I E S Y A+ AY D V GF K F D++ EER +A K ++Y
Sbjct: 297 IDVEYNVSYVYHALDAYIERDNVGLKGFTKFFNDSSLEERGYAEKFMEY 345
>At2g18230.1 68415.m02124 inorganic pyrophosphatase [soluble] (PPA)
/ pyrophosphate phospho-hydrolase / PPase nearly
identical to SP|P21216 Soluble inorganic pyrophosphatase
(EC 3.6.1.1) (Pyrophosphate phospho- hydrolase) (PPase)
{Arabidopsis thaliana}
Length = 218
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 334 PLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLNFSYNHRFFDDTQKN 185
P+I G+ D + C D KE PH + RFF+D +KN
Sbjct: 133 PMIDQGEKDDKIIAVCADDPEFRHYRDIKELPPH-RLAEIRRFFEDYKKN 181
>At1g79060.1 68414.m09218 expressed protein
Length = 396
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 355 ASLLHGEPLIPDGDGADVTLCSCGRS*GSNESEDSKENSPHLN 227
ASLL PL+ D D V++ S S S+ S E+ P L+
Sbjct: 175 ASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPRLS 217
>At4g25520.1 68417.m03680 transcriptional co-regulator family
protein contains similarity to GP|18033922|gb|AAL57277
SEUSS transcriptional co-regulator [Arabidopsis
thaliana]
Length = 748
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +3
Query: 450 APASRSYSSMLRLKNASTRPSSLTTCS*GES*QAP*PTSSRT 575
A A +Y SML +NA P+S T G S Q P P S+++
Sbjct: 558 AAALTNYQSMLMRQNAMNNPNSNTGKQEGFSSQNPTPNSNQS 599
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,384,902
Number of Sequences: 28952
Number of extensions: 192249
Number of successful extensions: 442
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -