Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt10b13
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 264 4e-71
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 107 7e-24
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30) 89 5e-18
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 85 4e-17
SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6) 72 4e-13
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 69 3e-12
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15) 64 2e-10
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18) 55 7e-08
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 43 3e-04
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 42 7e-04
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 41 0.001
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012
SB_47222| Best HMM Match : UQ_con (HMM E-Value=5) 36 0.027
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 33 0.25
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 33 0.34
SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24) 32 0.59
SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 31 1.4
SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 29 4.1
SB_47964| Best HMM Match : Abi_HHR (HMM E-Value=5) 29 4.1
SB_14159| Best HMM Match : ETF (HMM E-Value=9.9) 29 4.1
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 29 4.1
SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 29 4.1
SB_25381| Best HMM Match : ETF (HMM E-Value=9.9) 29 4.1
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_51755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24) 29 5.5
SB_20994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_33948| Best HMM Match : rve (HMM E-Value=2.8e-29) 29 5.5
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23) 29 5.5
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 7.2
SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01) 28 7.2
SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_11166| Best HMM Match : CARD (HMM E-Value=0.001) 28 9.5
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 264 bits (648), Expect = 4e-71
Identities = 118/145 (81%), Positives = 135/145 (93%)
Frame = +1
Query: 238 ELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKIS 417
EL+++R+SG K+FRD++VDESNIL WQGLIVP+ PPYNKGAFRIEI FPAEYPFKPPKI+
Sbjct: 1 ELDELRKSGTKTFRDVKVDESNILYWQGLIVPEMPPYNKGAFRIEICFPAEYPFKPPKIT 60
Query: 418 FKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 597
FKTKIYHPNIDEKGQVCLPIIS ENWKPATKT+QVIQAL+ALV+DPEPEHPLRA+LAEE+
Sbjct: 61 FKTKIYHPNIDEKGQVCLPIISPENWKPATKTEQVIQALLALVHDPEPEHPLRADLAEEY 120
Query: 598 LKDRKKFTKNAEEFTKKHSEKRPTD 672
KD+KKF KNAE+ TKK+ EKRP D
Sbjct: 121 SKDKKKFMKNAEDCTKKYGEKRPAD 145
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 107 bits (258), Expect = 7e-24
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Frame = +1
Query: 322 LIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAE---N 492
LI + PY+KG F+++I P YPF+PPK+ F T IYHPNID G++CL +
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPPKGM 61
Query: 493 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 648
WKPA V+ ++ L+ +P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 62 WKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 113
>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
Length = 204
Score = 88.6 bits (210), Expect = 5e-18
Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Frame = +1
Query: 325 IVPDNPPYNKGAFRIEIN----FPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAE- 489
++ ++PP+ + ++ N A PF+PPK+ F T IYHPNID G++CL +
Sbjct: 13 LLAEDPPHGASCWPVDENRIDKLEASTPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMPP 72
Query: 490 --NWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKK 648
WKPA V+ ++ L+ +P P+ PL AE++ EF ++ +F + A+E+T K
Sbjct: 73 KGMWKPALNISSVLSTILILMAEPNPDDPLMAEISNEFKYNKAQFLEKAKEWTLK 127
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 85.4 bits (202), Expect = 4e-17
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Frame = +1
Query: 196 SKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIE 372
+K +A R LQ EL + + ++ F DESN W I P Y G F+
Sbjct: 1118 AKLDLSSAVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAH 1177
Query: 373 INFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPI------------ISAENWKPATKTD 516
++FP +YP+ PP F TK++HPNI E G VC+ I + +E W P
Sbjct: 1178 MSFPHDYPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVR 1237
Query: 517 QVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAE 633
++ ++++L+N+P P + + F K R+ K++E
Sbjct: 1238 TILLSVISLLNEPNTFSPANVDASVMFRKWRETKGKDSE 1276
>SB_23214| Best HMM Match : zf-CW (HMM E-Value=9.6)
Length = 69
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/43 (72%), Positives = 39/43 (90%)
Frame = +1
Query: 205 CTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVP 333
C MAAT+RL KEL+++R+SG K+FRD++VDESNIL WQGLIVP
Sbjct: 27 CVMAATKRLGKELDELRKSGTKTFRDVKVDESNILYWQGLIVP 69
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/127 (24%), Positives = 69/127 (54%), Gaps = 13/127 (10%)
Frame = +1
Query: 247 DIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFK 423
++++ ++ F D+ ++ W+ ++V P Y +G F+ + FP EYP +PP ++F
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 424 TKIYHPNIDEKGQVCLPII------------SAENWKPATKTDQVIQALVALVNDPEPEH 567
+ I+HPN+ + G+VC+ I+ + E W+P + ++ ++++++ +P E
Sbjct: 403 SDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPNDES 462
Query: 568 PLRAELA 588
P + A
Sbjct: 463 PANVDAA 469
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 69.3 bits (162), Expect = 3e-12
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +R+Q+EL +I + ++ W I+ P Y G F ++I+FP++Y
Sbjct: 96 AAKRIQRELTEITLDPPPNC-SAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDY 154
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
PFKPP KG VCL I+ ++W PA +V+ ++ +L+ D P PL
Sbjct: 155 PFKPP---------------KGMVCLDILK-DSWSPALTISKVLLSICSLLTDCNPADPL 198
Query: 574 RAELAEEFLKDRKKFTKNAEEFTKKHS 654
+A ++++R + A+E+TK+++
Sbjct: 199 VGSIAALYVQNRSEHDATAKEWTKRYA 225
>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
Length = 243
Score = 63.7 bits (148), Expect = 2e-10
Identities = 32/100 (32%), Positives = 54/100 (54%)
Frame = +1
Query: 295 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLP 474
E N+ ++ I P + Y G F+ + +YP P I+ KTKIYHPN+D VC+
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVR-TTDYPNVAPSINCKTKIYHPNMDGYDGVCMS 91
Query: 475 IISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEE 594
++ ++W+ + + ++Q L+ L +P E PL + EE
Sbjct: 92 LL--DDWQASNDLEDLVQGLLFLFYNPNLEDPLSSLFEEE 129
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +1
Query: 418 FKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 597
F TKI+HPN+ + G++C+ + ++WKP QV+ + L+ P PE L E +
Sbjct: 147 FLTKIFHPNVAKNGEICVNTLK-KDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLL 205
Query: 598 LKDRKKFTKNAEEFTKKHSE 657
L+ ++K A+ FT+ H++
Sbjct: 206 LERYDDYSKRAKMFTEIHAK 225
>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
Length = 215
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +1
Query: 295 ESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQVCL 471
E N+ ++ I P + Y G F+ + +YP PP IYHPN+D + G VCL
Sbjct: 33 EDNMEEFELQITPTDGAYRGGQFKFSVK-TEDYPNTPPVPRCVNNIYHPNMDLDDGSVCL 91
Query: 472 PIISAENWKPATKTDQVIQALVALVNDPEPEHPL 573
++ ++W + + ++Q L+ L +P E PL
Sbjct: 92 SLL--DDWNESNDLEDLVQGLLFLFYNPNLEDPL 123
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 44.4 bits (100), Expect = 1e-04
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +RL +E ++R + Q E N+ W + P + + G + I P EY
Sbjct: 11 AVKRLMREAKELRNA--TELYHAQPLEDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEY 68
Query: 394 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALV 546
P KPP I T I +K + + E W+P+ V+ A++ +
Sbjct: 69 PMKPPSIMLLTPNGRFEIGKKICLSMSAHHPETWQPSWSIRTVLMAIIGFM 119
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 217 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 393
A +R+Q+EL +I + ++ W I+ P Y G F ++I+FP++Y
Sbjct: 136 AAKRIQRELTEITLDPPPNC-SAGPKGDDLYEWYSTILGPPGSVYEGGVFFLDIHFPSDY 194
Query: 394 PFKPPK 411
PFKPPK
Sbjct: 195 PFKPPK 200
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTK-----IYHPNIDE 453
D+ +I LI P + PY G F I P +YP +PP++ T ++PN+
Sbjct: 6 DKDDIPKIHALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYR 65
Query: 454 KGQVCLPII 480
G+VCL II
Sbjct: 66 NGKVCLSII 74
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKI---YHPNIDEKGQVCL-PIISAENWK 498
P PY+ G F +I PA YP PP + + +PN+ E G+VC+ P + N
Sbjct: 643 PAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCITPFLLRNNVP 702
Query: 499 PATKTDQVI 525
+ D V+
Sbjct: 703 VSRCNDHVV 711
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 313 WQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKI 414
W I+ P Y G F ++I+FP +YPFKPPK+
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPKV 88
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 37.5 bits (83), Expect = 0.012
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 10/119 (8%)
Frame = +1
Query: 220 TRRLQKELNDIRQSGLKSFRDIQVDESNILTWQ---------GLIVPDNPPYNKGAFRIE 372
++RL KE D+ + + F VD+ N+ W L+ D +
Sbjct: 736 SKRLMKEFQDVSRKTERIFSAELVDD-NLFEWNVKLHTIDGDSLLYRDMVETGSKFILLN 794
Query: 373 INFPAEYPFKPPKIS-FKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALV 546
I FP +PF PP + +I + + G +C+ +++ + W A + V+ A V
Sbjct: 795 ITFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKGWSSAYTVEAVVLQFSAAV 853
>SB_47222| Best HMM Match : UQ_con (HMM E-Value=5)
Length = 46
Score = 36.3 bits (80), Expect = 0.027
Identities = 14/42 (33%), Positives = 29/42 (69%)
Frame = +1
Query: 529 ALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHS 654
++ +L+ DP P+ PL ++A + D+ K+ + A+E+TKK++
Sbjct: 4 SICSLLCDPNPDDPLVPDIARIYKTDKPKYNELAKEWTKKYA 45
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 33.9 bits (74), Expect = 0.15
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPKIS 417
P PY G +++ ++ P +YPFK P I+
Sbjct: 57 PVGTPYEGGVWKVRVDLPEKYPFKSPSIA 85
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 292 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 426
DE+ + + L+ P + PY++G F +I FP YP PP + T
Sbjct: 1 DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 32.7 bits (71), Expect = 0.34
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 331 PDNPPYNKGAFRIEINFPAEYPFKPPK 411
P P+ G + ++I P YPF PPK
Sbjct: 696 PPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_57663| Best HMM Match : UQ_con (HMM E-Value=0.24)
Length = 48
Score = 31.9 bits (69), Expect = 0.59
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 493 WKPATKTDQVIQALVALVNDPEPEHPLRAELAEEF 597
W PA + V+ ++ AL++ P P+ PL ++AE++
Sbjct: 3 WSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQW 37
>SB_30264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 689
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +1
Query: 211 MAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINF 381
MAA R ++K LN + D++ ESN L L P Y KGA + +N+
Sbjct: 253 MAARRAVKKALNTAHNEYVMGLLDVKEKESNELPDDWLTANICPIYKKGAKKDPVNY 309
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 445 IDEKGQVCLPIISAENWKPATKTDQVIQALVALVNDPEPEHPLRAELA-EEFLKDRKKFT 621
++ KG PII K TK + ++ L + PEH R+ A E+ + R++ +
Sbjct: 855 VERKGAKTRPIIKGLRHKRRTKELKGLRVLHRMRRRYGPEHRKRSIKANEQTITARQELS 914
Query: 622 KNAEEFTKKHSEKRPTD*IHYKNFK 696
+A TK+ RP+D +++++F+
Sbjct: 915 GSA---TKEWGHFRPSDTMYFRHFR 936
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S KT+IYH +D+ LP ++A++ T+ D V
Sbjct: 171 YRKGVDHSNTDGLSRLPVDKPRVSEKTEIYHFSYVDD-----LP-VTAKDIAMETRKDSV 224
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 225 LSKVLHYVKSGWPQQTQEEELRPYF 249
>SB_5867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 595 FLKDRKKFTKNAEEFTKKHSEKRPTD*IHYKNFKF 699
FL+D KKF +N E K EK D + YK KF
Sbjct: 303 FLEDFKKFPRNDAEVLVKVIEKIHPDFVEYKGAKF 337
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A++ T+ D V
Sbjct: 685 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTAKDIAMETRKDSV 738
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 739 LSKVLHYVKSGWPQQTQEEELRPYF 763
>SB_47964| Best HMM Match : Abi_HHR (HMM E-Value=5)
Length = 275
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 30 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 83
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 84 LSKVLHYVKSGWPQQTQEEELRSYF 108
>SB_14159| Best HMM Match : ETF (HMM E-Value=9.9)
Length = 288
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A++ T+ D V
Sbjct: 171 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTAKDIAMETRKDSV 224
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 225 LSKVLHYVKSGWPQQTQEEELRPYF 249
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 301 NILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKT 426
N+ W + P + + G + I P EYP KPP I T
Sbjct: 2 NLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A++ T+ D V
Sbjct: 552 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTAKDIAMETRKDSV 605
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 606 LSKVLHYVKSGWPQQTQEEELRPYF 630
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A++ T+ D V
Sbjct: 808 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTAKDIAMETRKDSV 861
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 862 LSKVLHYVKSGWPQQTQEEELRPYF 886
>SB_25381| Best HMM Match : ETF (HMM E-Value=9.9)
Length = 528
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 171 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 224
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 225 LSKVLHYVKSGWPQQTQEEELRSYF 249
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 1029 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 1082
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 1083 LSKVLHYVKSGWPQQTQEEELRSYF 1107
>SB_51755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 194 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 247
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 248 LSKVLHYVKSGWPQQTQEEELRPYF 272
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 791 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 844
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 845 LSKVLHYVKSGWPQQTQEEELRPYF 869
>SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24)
Length = 553
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 92 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 145
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 146 LSKVLHYVKSGWPQQTQEEELRPYF 170
>SB_20994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 92 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 145
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 146 LSKVLHYVKSGWPQQAQEEELRPYF 170
>SB_33948| Best HMM Match : rve (HMM E-Value=2.8e-29)
Length = 361
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 346 YNKGAFRIEINFPAEYPFKPPKISFKTKIYH-PNIDEKGQVCLPIISAENWKPATKTDQV 522
Y KG + + P P++S +T+IYH +D+ LP ++A + T+ D V
Sbjct: 9 YRKGVDHSNADGLSRLPVDKPRVSEETEIYHFSYVDD-----LP-VTARDIAMETRKDSV 62
Query: 523 IQALVALVNDPEPEHPLRAELAEEF 597
+ ++ V P+ EL F
Sbjct: 63 LSKVLHYVKSGWPQQTQEEELRPYF 87
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = -3
Query: 567 MLWFWIIHKSH*CL---DNLISLGSRLPIFCTNDGQAHLTLFINVRVVN 430
M W W+IH S CL D++ S + F T+ Q+ T+ V V+
Sbjct: 2540 MTWIWLIHPSKHCLSKYDDIDVADSSILTFSTSTSQSVCTVHYRVCTVH 2588
>SB_19511| Best HMM Match : Glycos_transf_1 (HMM E-Value=6.2e-23)
Length = 496
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +1
Query: 424 TKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQALVALVN-DPEPEHPLRAELAEEFL 600
T I +P D K +PI + D VI+ ++++ PE +HPL+ + EFL
Sbjct: 277 TSIVYPPCDTKSFQEIPICLPQ--------DGVIKTIISIGQFRPEKDHPLQLKAFAEFL 328
Query: 601 KDRKKFTKN 627
K + K +++
Sbjct: 329 KGQPKSSRS 337
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 173 FGIFWDI--LANFVQWLQREDYKKNLMTSDS 259
F +F D+ L V+ L R DY++NLM SDS
Sbjct: 440 FCVFLDLPWLGKLVKLLFRHDYEENLMFSDS 470
>SB_9194| Best HMM Match : SWIM (HMM E-Value=0.01)
Length = 701
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 565 HPLRAELAEEFLKDR------KKFTKNAEEFTKKHSEKRPTD*IHYKNFK 696
+P ++A L+++ K +N E +K EK P D HY+ F+
Sbjct: 77 YPTNKDIANAILREKTRQCHSKADQENLEHLVRKWKEKSPDDFFHYRRFQ 126
>SB_57668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 367 IEINFPAEYPFKPPKISFKTKIYHPN-IDEKGQVCLPIISAENWKPATKTDQVIQALVA 540
+ + F ++PF PP + + + G +C+ +++ + W A + VI + A
Sbjct: 575 LNMTFTDKFPFDPPFVRVCYPVIQAGYVLSGGAICMELLTPQGWSSAYTIEAVIVQISA 633
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 361 FRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 462
+ ++I YP KPP + F +KI ++ KG+
Sbjct: 8 YNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 361 FRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 462
+ ++I YP KPP + F +KI ++ KG+
Sbjct: 8 YNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41
>SB_11166| Best HMM Match : CARD (HMM E-Value=0.001)
Length = 720
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 286 QVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKI 414
Q+ E N+L GL+ +NPPY + + IN +EY PKI
Sbjct: 528 QMGEDNVL---GLVDHENPPYTDVSTQWLINLMSEY-ISGPKI 566
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,609,474
Number of Sequences: 59808
Number of extensions: 464265
Number of successful extensions: 1215
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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