Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b13
         (767 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.5  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   5.9  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 475 IISAENWK-PATKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKH 651
           I+    +K P  K ++ + AL    N+   E   R +LAE  +KD +K    A E+ K+ 
Sbjct: 245 IVGTTRYKVPLLKINERVDAL----NEERTEKHNRCKLAEREMKDLEKPKTEAVEYLKQE 300

Query: 652 S 654
           +
Sbjct: 301 N 301


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +1

Query: 505 TKTDQVIQALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNAEEFTKKHSE 657
           T+    ++ L A + D +       + AEE LK  KK ++ + +  KKH +
Sbjct: 765 TQCSAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQ 815


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 529 ALVALVNDPEPEHPLRAELAEEFLKDRKKFTKNA 630
           AL  L N+P+ +  +RAE+ E+      K T +A
Sbjct: 322 ALFELANNPDIQERVRAEMLEKLQLHDGKITYDA 355


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,510
Number of Sequences: 2352
Number of extensions: 16943
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)